ID: uc002nxk.1
GENE: GRAMD1A(1)
chr19:35500592-35500841+


(1)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(3)
AGO2.ip 		(6)
B-CELL 		(1)
BRAIN 		(14)
BREAST 		(28)
CELL-LINE 		(3)
CERVIX 		(1)
FIBROBLAST 		(6)
HEART 		(2)
HELA 		(6)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(19)
SKIN 		(1)
TESTES 		(1)
XRN.ip

Sense strand
GTGATGCTGGTGGGTGCTTGGTACGGGGCCCGGCTTACATAAGAAATCTGTAAATGGCAGCTGTCATTGTGGCTACTGGTGTGTTGTGTGCGTTGGAATCTGTCAGGGACTTAAGAGACTGAGGGGGTTCCAGGAGCTTTGTGGGGCAGCATTGGGAGTGTGAACCCCCATCCAGGTTCTCACCTCTCAAACTTCCTCAGATGCTGAGCCCCACTTATAAGCAGCGTAATGAGGACTTCCGGAAACTGTT
.............................................................................................................................................(((((.((..(((((((((.(((((........))))).))).)))))).)).)))))...................................................
..........................................................................................................................................139..........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189783SRR189784SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189786SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR189787SRR189785SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR037941(GSM510479)
293DroshaTN. (cell line)		TAX577739(Rovira)
total RNA. (breast)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		TAX577740(Rovira)
total RNA. (breast)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040011(GSM532896)
G529T. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029126(GSM416755)
143B. (cell line)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR029131(GSM416760)
MCF7. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR040028(GSM532913)
G026N. (cervix)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191627(GSM715737)
45genomic small RNA (size selected RNA from t. (breast)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR191567(GSM715677)
46genomic small RNA (size selected RNA from t. (breast)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR029129(GSM416758)
SW480. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040016(GSM532901)
G645N. (cervix)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)		SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)		SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR037936(GSM510474)
293cand1. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR038855(GSM458538)
D10. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191509(GSM715619)
156genomic small RNA (size selected RNA from . (breast)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR191522(GSM715632)
93genomic small RNA (size selected RNA from t. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
...................................................................................................................................................................................TCACCTCTCAAACTTCCTCAG..................................................211339.00339.00279.0029.0017.00-----7.00--1.00-------1.00--------1.00-----------1.00------1.00-----------------------1.00-1.00---------------------
...................................................................................................................................................................................TCACCTCTCAAACTTCCTCAGT.................................................221170.00339.0076.004.003.008.001.007.0013.005.00-6.006.003.002.00--4.00-2.00--2.002.001.002.00-2.00-1.00-2.00-1.00----2.002.00-1.00-----1.00--1.00---------------1.00--1.00-1.00----1.001.00-1.001.00------1.00----1.001.00---
..................................................................................................................................................................................CTCACCTCTCAAACTTCCTCAG..................................................22166.0066.0062.004.00---------------------------------------------------------------------------------------------
..................................................................................................................................................................................CTCACCTCTCAAACTTCCTCAGT.................................................23150.0066.0023.00-2.009.001.006.00-1.00----1.00-------------2.00------------1.00--------------1.001.00--------------1.00------------------1.00-----
...................................................................................................................................................................................TCACCTCTCAAACTTCCTCAGA.................................................22117.0017.005.00-1.006.00----------------1.00------1.00------------------------------1.00------------------------1.00----1.00------
...................................................................................................................................................................................TCACCTCTCAAACTTCCTCA...................................................20113.0013.0011.002.00---------------------------------------------------------------------------------------------
...................................................................................................................................................................................TCACCTCTCAAACTTCCTCAGC.................................................22111.00339.002.00-3.00-2.00--4.00---------------------------------------------------------------------------------------
...................................................................................................................................................................................TCACCTCTCAAACTTCCCCAG..................................................2110.000.003.00-7.00--------------------------------------------------------------------------------------------
...................................................................................................................................................................................TCACCTCTCAAACTTCCTCAA..................................................2117.0013.007.00----------------------------------------------------------------------------------------------
..................................................................................................................................................................................CTCACCTCTCAAACTTCCTCAGA.................................................2317.007.001.00-----------------2.00---------1.00-----------------1.00---------------------1.00---1.00----------------------
..................................................................................................................................................................................CTCACCTCTCAAACTTCCTCA...................................................2116.006.002.002.00---------------------------------------2.00-----------------------------------------------------
...................................................................................................................................................................................TCACCTCTCAAACTTCTCAG...................................................205.000.004.001.00---------------------------------------------------------------------------------------------
...................................................................................................................................................................................TCACCTCTCAAACTTCCTCAT..................................................2115.0013.005.00----------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................AGCAGCGTAATGAGGACTTCCGGA.......2415.005.00-------------------1.00-------------2.00-------------------1.00-----1.00-----------------------------------
..................................................................................................................................................................................CTCACCTCTCAAACTTCCCCAG..................................................225.000.00--5.00--------------------------------------------------------------------------------------------
................................................................................................................................................................................TTCTCACCTCTCAAACTTCCTCAG..................................................2413.003.003.00----------------------------------------------------------------------------------------------
...........................................................................................................................................TGTGGGGCAGCATTGGGAGTGTGA.......................................................................................2413.003.00-----------------------------------2.00------------------------------1.00----------------------------
...................................................................................................................................................................................TCACCTCTCAAACTTCCCAG...................................................203.000.00--2.00-----1.00--------------------------------------------------------------------------------------
..................................................................................................................................................................................CTCACCTCTCAAACTTCCTCACT.................................................2313.006.00-3.00---------------------------------------------------------------------------------------------
.....................................................................................................................................................................................ACCTCTCAAACTTCCTCAGT.................................................2013.002.003.00----------------------------------------------------------------------------------------------
...................................................................................................................................................................................TCACCTCTCAAACTTCCTCAGG.................................................2212.00339.002.00----------------------------------------------------------------------------------------------
...................................................................................................................................................................................TCACCTCTCAAACTTCCTCAGTTT...............................................2412.00339.00------------------------------------------1.00-------1.00--------------------------------------------
...................................................................................................................................................................................TCACCTCTCAAACTTCCTCAGTA................................................2312.00339.00-------------------------------------------1.00----------------1.00----------------------------------
...........................................................................................................................................TGTGGGGCAGCATTGGGAGTG..........................................................................................2112.002.00--1.00-1.00------------------------------------------------------------------------------------------
...........................................................................................................................................TGTGGGGCAGCATTGGGAGTGCGA.......................................................................................2412.002.00----2.00------------------------------------------------------------------------------------------
......................................................................................................................................................ATTGGGAGTGTGAACCCCCATCCAG...........................................................................2512.002.002.00----------------------------------------------------------------------------------------------
.....................................................................................................................................................................................ACCTCTCAAACTTCCTCAG..................................................1912.002.001.00------------------------------------------------------------------------------1.00---------------
..................................................................................................................................................................................CTCACCTCTCAAACTTCTCAG...................................................212.000.002.00----------------------------------------------------------------------------------------------
...................................................................................................................................................................................TCACCTCTCAAACTTCCTCAGTT................................................2312.00339.001.00------1.00---------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................TATAAGCAGCGTAATGAGGACTTCCG.........2612.002.00-------------2.00---------------------------------------------------------------------------------
..........................................................................................................................................................................................................................AAGCAGCGTAATGAGGACTTCCGGAA......2612.002.00------------------------1.00------------------------1.00---------------------------------------------
..................................................................................................................................................................................CTCACCTCTCAAACTTCCTCATT.................................................2312.006.002.00----------------------------------------------------------------------------------------------
...........................................................................................................................................TGTGGGGCAGCATTGGGAGTGCGAT......................................................................................2512.002.00----2.00------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................GTAATGAGGACTTCCGGA.......1812.002.00------------1.00-------------------------------------------------------------------1.00--------------
....................................................................................................................................................................................CACCTCTCAAACTTCCTCAG..................................................2012.002.002.00----------------------------------------------------------------------------------------------
...................................................................................................................................................................................TCACCTCTCAAACTTCCTAAG..................................................212.000.001.00-1.00--------------------------------------------------------------------------------------------
...................................................................................................................................................................................TCACCTCTCAAACTTCCAGT...................................................202.000.001.00---1.00------------------------------------------------------------------------------------------
...................................................................................................................................................................................TCACCTCTCAAACTTCCTTAG..................................................212.000.002.00----------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................AAGCAGCGTAATGAGGACTTCCGGA.......2512.002.00-------------------1.00--------------------------------------------------------------1.00------------
................................................................................................................................................................................TTCTCACCTCTCAAACTTCCTCAGT.................................................2512.003.002.00----------------------------------------------------------------------------------------------
................................................................................................................................................................................TTCTCACCTCTCAAACTTCCTCA...................................................2312.002.002.00----------------------------------------------------------------------------------------------
...............................................................................................................................................................................GTTCTCACCTCTCAAACTTCC......................................................2111.001.001.00----------------------------------------------------------------------------------------------
..........................................................................................................................................TTGTGGGGCAGCATTGGGAGTGTGA.......................................................................................2511.001.00------------------------------------------------------------------------------------1.00----------
...........................................................................................................................................................................................................................AGCAGCGTAATGAGGACTTCCGGAT......2511.005.00----------------------------------1.00------------------------------------------------------------
........................................................................................................................................................................................................................ATAAGCAGCGTAATGAGGACAAGA..........241.000.00-------------1.00---------------------------------------------------------------------------------
...........................................................................................................................................TGTGGGGCAGCATTGGGAGTGTGC.......................................................................................2411.001.00----1.00------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................AGCGTAATGAGGACTTCCGGA.......2111.001.00---------------------------------------------------1.00-------------------------------------------
...................................................................................................................................................................................TCACCTCTCAAACTTCCTTAGT.................................................221.000.001.00----------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................TTATAAGCAGCGTAATGAGGACTTCCGGA.......2911.001.00----------------1.00------------------------------------------------------------------------------
.............................................................................................................................................................................................................................CAGCGTAATGAGGACTTCCGGAAACTG..2711.001.00-------------1.00---------------------------------------------------------------------------------
................................................................................................................................................................................................................................CGTAATGAGGACTTCCGGAAAC....2211.001.00-------------1.00---------------------------------------------------------------------------------
.......................................................................................................................................................................................................................TATAAGCAGCGTAATGAG.................1811.001.00---------------------------------------------------------------------------------1.00-------------
..............................................................................................................................................................TGTGAACCCCCATCCAGAAG........................................................................201.000.00-------1.00---------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................AGCAGCGTAATGAGGACTTCCGGATT.....2611.005.00----------------1.00------------------------------------------------------------------------------
................................................................................................................................................................................TTCTCACCTCTCAAACTTCCTCT...................................................231.000.00-1.00---------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................TATAAGCAGCGTAATGAGGACT.............2211.001.00------------------------1.00----------------------------------------------------------------------
...................................................................................................................................AGGAGCTTTGTGGGGCAG.....................................................................................................1811.001.00------------------1.00----------------------------------------------------------------------------
..................................................................................................................................................................................CTCACCTCTCAAACTTCCCAG...................................................211.000.001.00----------------------------------------------------------------------------------------------
...................................................................................................................................................................................TCACCTCTCAAACTTCCTCAGTG................................................2311.00339.00----------------------1.00------------------------------------------------------------------------
...........................................................................................................................................................................................................................AGCAGCGTAATGAGGACTTCCGG........2311.001.00--------------------------------------------------------1.00--------------------------------------
........................................................................................................................................................................................................ATGCTGAGCCCCACTTATA...............................1911.001.00----------------1.00------------------------------------------------------------------------------
...........................................................................................................................................TGTGGGGCAGCATTGGGAGTGTGAACCCC..................................................................................2911.001.00----1.00------------------------------------------------------------------------------------------
...................................................................................................................................................................................TCACCTCTCAAACTTCCTCTG..................................................211.000.001.00----------------------------------------------------------------------------------------------
....................................................................................................................................................................................CACCTCTCAAACTTCCTCAGAAAG..............................................241.000.00------------1.00----------------------------------------------------------------------------------
...................................................................................................................AGACTGAGGGGGTTCCCT.....................................................................................................................181.000.00---------------------------------------------------------------1.00-------------------------------
........................................................................................................................................................................................................................ATAAGCAGCGTAATGAGGACTTCCGGA.......2711.001.00-------------------------------1.00---------------------------------------------------------------
...........................................................................................................................................TGTGGGGCAGCATTGGGAGTGTG........................................................................................2311.001.00---1.00-------------------------------------------------------------------------------------------
..................................................................................................................................................................................CTCACCTCTCAAACTTCCTC....................................................2011.001.00-----------1.00-----------------------------------------------------------------------------------
....................................................................................................................................................................................CACCTCTCAAACTTCCTCAGAAA...............................................231.000.00----------------------------------------1.00------------------------------------------------------
...................................................................................................................................................................................TCACCTCTCAAACTTCCTCCGT.................................................221.000.001.00----------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................TTATAAGCAGCGTAATGAGGAC..............2211.001.00------------------------------------------1.00----------------------------------------------------
..............................................................................................................................................................................................................................AGCGTAATGAGGACTTCCT.........191.000.00--------------------------------1.00--------------------------------------------------------------
..............................................................................GTGTGTTGTGTGCGTCGGA.........................................................................................................................................................191.000.00--------------------------------------------1.00--------------------------------------------------
....................................................................................................................................................................................................................ACTTATAAGCAGCGTAATGAG.................2111.001.00----------------------------------------------------1.00------------------------------------------
...................................................................................................................................................................................TCACCTCTCAAACTTCCTCAGGT................................................2311.00339.001.00----------------------------------------------------------------------------------------------
...........................................................................................................................................TGTGGGGCAGCATTGGGAGTGGGA.......................................................................................2411.002.00-------1.00---------------------------------------------------------------------------------------
........................................................................................................................................................................................................................ATAAGCAGCGTAATGAGGACTTCCG.........2511.001.00------------------------------1.00----------------------------------------------------------------
.....................................................................................................................ACTGAGGGGGTTCCAGGAG..................................................................................................................1911.001.00-------------------------------------------------------------1.00---------------------------------
...................................................................................................................................................................................TCACCTCTCAAACTTCAGT....................................................191.000.001.00----------------------------------------------------------------------------------------------
............................................................................................TTGGAATCTGTCAGGAAAG...........................................................................................................................................191.000.00----------------------------------1.00------------------------------------------------------------
...........................................................................................................................................TGTGGGGCAGCATTGGGAGTGT.........................................................................................2211.001.00--------------------------------------------------------------1.00--------------------------------
...................................................................................................................................................................................TCACCTCTCAAACTTCCTCAGTAA...............................................2411.00339.001.00----------------------------------------------------------------------------------------------
..........................................................................................................................................TTGTGGGGCAGCATTGGGAGTGTGAACCCC..................................................................................3011.001.00----1.00------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................AGCAGCGTAATGAGGACTTCCGGAAACG...281.000.00----------------------------------------------------------------------------1.00------------------
.....................................................................................................................................................CATTGGGAGTGTGAACCC...................................................................................1811.001.00---------------------------------------------------------------------------------------1.00-------
....................................................................................................................................................................................................................ACTTATAAGCAGCGTAATGAGGACTTC...........2711.001.00------------------------------1.00----------------------------------------------------------------
............................................................................................................................................GTGGGGCAGCATTGGGAGTGTGA.......................................................................................2311.001.00--------------------------------1.00--------------------------------------------------------------
...................................................................................................................................................................................TCACCTCTCAAACTTCCTCATT.................................................2211.0013.00-----------------1.00-----------------------------------------------------------------------------
..............................................................................................................................................................................................................................AGCGTAATGAGGACTTCCG.........1911.001.00--------------------------------------------------------------------------------------1.00--------
.............................................................................................................................................................................AGGTTCTCACCTCTCAAACTTCCTCT...................................................261.000.001.00----------------------------------------------------------------------------------------------
...................................................................................................................................................................................TCACCTCTCAAACTTCCTCACT.................................................2211.0013.00---------1.00-------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................AGCAGCGTAATGAGGACTTCCGGAAACT...2811.001.00-----------------------------------------------------------------1.00-----------------------------
............................................................................................................................................................................................................................GCAGCGTAATGAGGACTT............1811.001.00---------------------------------------------------------1.00-------------------------------------
.....................................................................................................................................................CATTGGGAGTGTGAACC....................................................................................1711.001.00---------------------1.00-------------------------------------------------------------------------
....................................................................................................................................................................................CACCTCTCAAACTTCCTCA...................................................1911.001.001.00----------------------------------------------------------------------------------------------
.......................................................................................................................................................................................CTCTCAAACTTCCTCAG..................................................1720.500.500.50----------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................CTTCCGGAAACTGTT1530.330.33--------------------------------------------------------------------------------------------0.33--
......................................................................................................................................................ATTGGGAGTGTGAAC.....................................................................................1550.200.20-------------------------------------------0.20---------------------------------------------------

Antisense strand
GTGATGCTGGTGGGTGCTTGGTACGGGGCCCGGCTTACATAAGAAATCTGTAAATGGCAGCTGTCATTGTGGCTACTGGTGTGTTGTGTGCGTTGGAATCTGTCAGGGACTTAAGAGACTGAGGGGGTTCCAGGAGCTTTGTGGGGCAGCATTGGGAGTGTGAACCCCCATCCAGGTTCTCACCTCTCAAACTTCCTCAGATGCTGAGCCCCACTTATAAGCAGCGTAATGAGGACTTCCGGAAACTGTT
.............................................................................................................................................(((((.((..(((((((((.(((((........))))).))).)))))).)).)))))...................................................
..........................................................................................................................................139..........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189783SRR189784SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189786SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR189787SRR189785SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR037941(GSM510479)
293DroshaTN. (cell line)		TAX577739(Rovira)
total RNA. (breast)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		TAX577740(Rovira)
total RNA. (breast)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040011(GSM532896)
G529T. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029126(GSM416755)
143B. (cell line)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR029131(GSM416760)
MCF7. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR040028(GSM532913)
G026N. (cervix)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191627(GSM715737)
45genomic small RNA (size selected RNA from t. (breast)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR191567(GSM715677)
46genomic small RNA (size selected RNA from t. (breast)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR029129(GSM416758)
SW480. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040016(GSM532901)
G645N. (cervix)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)		SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)		SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR037936(GSM510474)
293cand1. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR038855(GSM458538)
D10. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191509(GSM715619)
156genomic small RNA (size selected RNA from . (breast)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR191522(GSM715632)
93genomic small RNA (size selected RNA from t. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
......................................................................................................................................................................................CCTCTCAAACTTCCTATC.................................................. 184.000.00--------------4.00--------------------------------------------------------------------------------
........................................................................................................................................................................................................................ATAAGCAGCGTAATGTTTG............... 192.000.00--2.00--------------------------------------------------------------------------------------------
......................................................................................................................................................................................CCTCTCAAACTTCCTATCT................................................. 192.000.00--------------------------------------2.00--------------------------------------------------------
............................................................................................................................................................................................................................................TTCCGGAAACTGTT 1490.110.11----------------------------------------------------------------------------------------------0.11
......................................................................................................................................................................................................................................GAGGACTTCCGGAA...... 1490.110.11---------------------------------------------------------------------------------------------0.11-