ID: uc002muf.2
GENE: DHPS(2)
chr19:12787976-12788154-


(2)
AGO1.ip 		(2)
AGO2.ip 		(1)
AGO3.ip 		(4)
B-CELL 		(1)
BRAIN 		(9)
BREAST 		(24)
CELL-LINE 		(2)
HEART 		(6)
HELA 		(3)
LIVER 		(3)
OTHER 		(18)
SKIN 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
CTTCTTCCATTCCTACAAGAACCCGGGCCTGGTCCTGGACATCGTTGAGGGTGAGGCGCTAGGGCCACAGAGGAGAGGGGAAGGAGGGCTGGCTGAGTCCAAGGCCTGACTTCGGCGCTCTTCCCCCAGACCTGAGGCTCATCAACACACAGGCCATCTTTGCCAAGTGCACTGGGATG
............................................................................((((.(((((.((((...(((((........))))))))).))))).))))....................................................
......................................................................71........................................................129................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR189782GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR029124(GSM416753)
HeLa. (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189786SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR191556(GSM715666)
45genomic small RNA (size selected RNA from t. (breast)		SRR037935(GSM510473)
293cand3. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR029129(GSM416758)
SW480. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		TAX577744(Rovira)
total RNA. (breast)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191449(GSM715559)
144genomic small RNA (size selected RNA from . (breast)		SRR189784DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR029127(GSM416756)
A549. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR189787SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		TAX577453(Rovira)
total RNA. (breast)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.............................................................................................................CTTCGGCGCTCTTCCCCCAGT.................................................21146.009.009.006.00--2.00-5.001.002.003.00---1.00-1.00-------1.00-1.00----1.00---1.00-1.00-1.001.00-----1.001.00----1.00--1.001.001.001.00-------------1.001.00---
.............................................................................................................CTTCGGCGCTCTTCCCCCAGA.................................................21119.0019.009.002.00--1.00---1.00---2.00----1.00---1.00---------------1.00-----------------------------1.00--------
.............................................................................................................CTTCGGCGCTCTTCCCCCAGTT................................................22116.009.004.002.0010.00-------------------------------------------------------------------------
............................................................................................................ACTTCGGCGCTCTTCCCCCAGT.................................................22114.002.009.00--1.00---------------2.00---1.00-----------------------1.00----------------------------
.............................................................................................................CTTCGGCGCTCTTCCCCCAG..................................................2019.009.003.00---------------2.00---1.00-----------1.001.00----------------1.00-------------------------
............................................................................................................ACTTCGGCGCTCTTCCCCCAGA.................................................2215.005.004.00--------------1.00------------------------------------------------------------
.............................................................................................................CTTCGGCGCTCTTCCCCCAGTATC..............................................2415.009.00-----5.00----------------------------------------------------------------------
................................TCCTGGACATCGTTGAGG.................................................................................................................................1812.002.00----------1.00-----------------------------1.00-----------------------------------
.............................................................................................................CTTCGGCGCTCTTCCCCCCGT.................................................212.000.00-----------------------------------------------------1.00---------1.00------------
.............................................................................................................CTTCGGCGCTCTTCCCCCAGTGA...............................................2312.009.002.00---------------------------------------------------------------------------
..............................................................................................................TTCGGCGCTCTTCCCCCAGACA...............................................222.000.002.00---------------------------------------------------------------------------
.............................................................................................................CTTCGGCGCTCTTCCCCCAGTAA...............................................2312.009.00-1.00-----------1.00--------------------------------------------------------------
............CTACAAGAACCCGGGCCTGGT..................................................................................................................................................2112.002.00----------------------------------------------------------1.00-1.00---------------
.............................................................................................................CTTCGGCGCTCTTCCCCCAGAC................................................2212.002.00----------------------2.00-----------------------------------------------------
.............................................................................................................CTTCGGCGCTCTTCCCCCAGAA................................................2212.0019.001.00------------------------------------------------------------1.00--------------
............................................................................................................ACTTCGGCGCTCTTCCCCCAG..................................................2112.002.00---1.00-----------------1.00------------------------------------------------------
.............................................................................................................CTTCGGCGCTCTTCCCCCAGTTT...............................................2312.009.00-----------------------------------------1.00------------------------1.00---------
.............................................................................................................CTTCGGCGCTCTTCCCCCAGTA................................................2212.009.00-------1.00--------------------------------------------------------------1.00-----
...........................................................................AGGGGAAGGAGGGCTTTTT.....................................................................................191.000.00-------------------------------1.00--------------------------------------------
.................................CCTGGACATCGTTGAGGAC...............................................................................................................................1911.001.00--------------------------------------------------------------------1.00-------
.................AGAACCCGGGCCTGGTCCTGGACATCGTTGAGG.................................................................................................................................3311.001.00-------1.00--------------------------------------------------------------------
............................................................................GGGGAAGGAGGGCTGGCTT....................................................................................191.000.00-------------------------------------------1.00--------------------------------
.........................................................................AGAGGGGAAGGAGGGCTGGCTGAGTC................................................................................2611.001.00-----------1.00----------------------------------------------------------------
.............................................................................................................CTTCGGCGCTCTTCCCCCAGCAA...............................................2311.009.00----1.00-----------------------------------------------------------------------
...........................................................................................................GACTTCGGCGCTCTTCCCCCAG..................................................2211.001.00---1.00------------------------------------------------------------------------
............................................................................................................ACTTCGGCGCTCTTCCCCCAGAT................................................2311.005.001.00---------------------------------------------------------------------------
.......................CGGGCCTGGTCCTGGACATCGTTT....................................................................................................................................241.000.00------------------------------------------1.00---------------------------------
.............................................................................................................CTTCGGCGCTCTTCCCCCAT..................................................201.000.00---1.00------------------------------------------------------------------------
............................................................................................................ACTTCGGCGCTCTTCCCCCTGT.................................................221.000.00-----------------------------------------------------------1.00----------------
..................GAACCCGGGCCTGGTCCTGGACATCGTTGAGGC................................................................................................................................331.000.00-------1.00--------------------------------------------------------------------
.............................................................................................................CTTCGGCGCTCTTCCCCCAGAAA...............................................2311.0019.00----------------------------------------------------1.00-----------------------
............................................................................................................ACTTCGGCGCTCTTCCCCCA...................................................2011.001.00---1.00------------------------------------------------------------------------
...........................................................................AGGGGAAGGAGGGCTGGCTGA...................................................................................2111.001.00----------------------------1.00-----------------------------------------------
.........................................................................AGAGGGGAAGGAGGGCTGGCTGAGT.................................................................................2511.001.00-------------------------------------------------1.00--------------------------
............................................................................................................ACTTCGGCGCTCTTCCCCAGT..................................................211.000.00---1.00------------------------------------------------------------------------
............................................................................................................ACTTCGGCGCTCTTCCCCCAT..................................................2111.001.00---1.00------------------------------------------------------------------------
..............................................................................................................TTCGGCGCTCTTCCCCCAGT.................................................201.000.00-----------------------------1.00----------------------------------------------
.................AGAACCCGGGCCTGGTCCTGGACA..........................................................................................................................................2411.001.00--------------------------------------------1.00-------------------------------
........................GGGCCTGGTCCTGGACATCGTT.....................................................................................................................................2211.001.00-----------------------------------------------------------------1.00----------
.............................................................................................................CTTCGGCGCTCTTCCCCCAGTAG...............................................2311.009.00----1.00-----------------------------------------------------------------------
.............................................................................................................CTTCGGCGCTCTTCCCCCAGTAT...............................................2311.009.00-----------1.00----------------------------------------------------------------
.............................................................................................................CTTCGGCGCTCTTCCCCCAGC.................................................2111.009.00--------------------1.00-------------------------------------------------------
............CTACAAGAACCCGGGCCTGG...................................................................................................................................................2011.001.00--------------------------------------------------------------1.00-------------
...........................................................................AGGGGAAGGAGGGCTGGCTGAGA.................................................................................231.000.00-----------------1.00----------------------------------------------------------
.........................................................................................................................................CTCATCAACACACAGGCCATCTTTG.................2511.001.00---1.00------------------------------------------------------------------------
.............................................................................GGGAAGGAGGGCTGGCGGCA..................................................................................201.000.00---------------------------1.00------------------------------------------------
............................................................................................................ACTTCGGCGCTCTTCCCCCAGAC................................................2311.001.00------------------------1.00---------------------------------------------------
.............................................................................................................CTTCGGCGCTCTTCCCCCAGTAAT..............................................2411.009.001.00---------------------------------------------------------------------------
.................................CCTGGACATCGTTGAGG.................................................................................................................................1711.001.00--------------------------1.00-------------------------------------------------
..........................................................................GAGGGGAAGGAGGGCTGGCTGAGT.................................................................................2411.001.00--------------1.00-------------------------------------------------------------
.............................................................................................................CTTCGGCGCTCTTCCCCAGA..................................................201.000.00----------------------------------------------------------------1.00-----------
...................................TGGACATCGTTGAGG.................................................................................................................................1520.500.50-------0.50--------------------------------------------------------------------
................AAGAACCCGGGCCTGG...................................................................................................................................................1620.500.50-------------------------------------------------------------------------0.50--
..................................................GTGAGGCGCTAGGG...................................................................................................................1450.200.20----------0.20-----------------------------------------------------------------
.....................................................................................................AGGCCTGACTTCGG................................................................1450.200.20--------------------------------------------------------------------------0.20-
....................................................................................................AAGGCCTGACTTCG.................................................................1470.140.14---------------------------------------------------------------------------0.14

Antisense strand
CTTCTTCCATTCCTACAAGAACCCGGGCCTGGTCCTGGACATCGTTGAGGGTGAGGCGCTAGGGCCACAGAGGAGAGGGGAAGGAGGGCTGGCTGAGTCCAAGGCCTGACTTCGGCGCTCTTCCCCCAGACCTGAGGCTCATCAACACACAGGCCATCTTTGCCAAGTGCACTGGGATG
............................................................................((((.(((((.((((...(((((........))))))))).))))).))))....................................................
......................................................................71........................................................129................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR189782GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR029124(GSM416753)
HeLa. (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189786SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR191556(GSM715666)
45genomic small RNA (size selected RNA from t. (breast)		SRR037935(GSM510473)
293cand3. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR029129(GSM416758)
SW480. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		TAX577744(Rovira)
total RNA. (breast)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191449(GSM715559)
144genomic small RNA (size selected RNA from . (breast)		SRR189784DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR029127(GSM416756)
A549. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR189787SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		TAX577453(Rovira)
total RNA. (breast)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.....................................................................................................................CTCTTCCCCCAGACCTGC............................................ 182.000.00------------------2.00---------------------------------------------------------
......CCATTCCTACAAGAACCCG.......................................................................................................................................................... 1911.001.00---------------------------------------------------------------------1.00------
............................................................................................................................CCCAGACCTGAGGCTCCC..................................... 181.000.00-----------------------------------1.00----------------------------------------
...........................CCTGGTCCTGGACATCG....................................................................................................................................... 1711.001.00----------1.00-----------------------------------------------------------------
....................................................GAGGCGCTAGGGCCACATCGG.......................................................................................................... 211.000.00------------------------------------------------1.00---------------------------
........................................................................................................CCTGACTTCGGCGCTCTTCCCCCAGACCTGAG........................................... 3211.001.00--------------1.00-------------------------------------------------------------