ID: uc002jni.10
GENE: GGA3(10)
chr17:73238505-73238961-


(3)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(3)
AGO2.ip 		(1)
AGO3.ip 		(10)
B-CELL 		(8)
BRAIN 		(17)
BREAST 		(34)
CELL-LINE 		(5)
CERVIX 		(7)
HEART 		(4)
HELA 		(1)
KIDNEY 		(8)
LIVER 		(3)
OTHER 		(34)
SKIN 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
CAGATGACCTGCAGGAGGCCAACAAGCTCATCAAGTCCATGGTGAAGGAAGTGAGTGGGCCCCGGTCCTTCAGGCACGGGGTGGAGGAGCCCATGGCCACACAGCAGAAGCCGCTTTGCCCCGGACACGGGCCTGTTTTGTTCTCCCCTGCTGCCAGCTGCCCTACCTGTGCCCCGGTGGCTGAGAGTGGGAGGAGGAGCACAATAGCTTCCGCGGGAGCACGGAAGAGAGGAGTGGGTTGGGAGCAGTGTTGTGAAAGCAGAAGTATAGACTGGGCCCCAGGCACCCCACACTGAAAGGAGCTTCCGAGCGTCTGTACTTGTGTTGTGGGGTAAGGTGTGACCTGGTGGAAGTGGAAAGACAGTCAAGTGACGCTCTCTTTCTCTTGAACTTCTTCACTGGGGCAGGACGAGGCACGGATCCAGAAGGTGACCAAGCGTCTGCACACGTTAGAGGA
...................................................................................................................................................................................................................................................................................................................................................((.((..(((((((((((((((..(((....)))....))))))).....)))))..)))..)).))...................................................
............................................................................................................................................................................................................................................................................................................................................333.......................................................................407................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR189782SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR037941(GSM510479)
293DroshaTN. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189786SRR037939(GSM510477)
293cand5_rep1. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577739(Rovira)
total RNA. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029124(GSM416753)
HeLa. (hela)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR038861(GSM458544)
MM466. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		TAX577742(Rovira)
total RNA. (breast)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577746(Rovira)
total RNA. (breast)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577745(Rovira)
total RNA. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR038858(GSM458541)
MEL202. (cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		TAX577741(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189784SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR040040(GSM532925)
G612N. (cervix)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR191492(GSM715602)
154genomic small RNA (size selected RNA from . (breast)		SRR037938(GSM510476)
293Red. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR038856(GSM458539)
D11. (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR040035(GSM532920)
G001T. (cervix)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)		SRR040023(GSM532908)
G575T. (cervix)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM532873(GSM532873)
G699N. (cervix)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR191564(GSM715674)
87genomic small RNA (size selected RNA from t. (breast)		SRR189787SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAGT.................................................23163.0041.0012.007.00-------4.00-2.004.002.00-1.001.001.001.002.00-2.00------1.00--------1.00---1.00--2.00--2.001.00-1.00--2.00----1.001.00-----2.00-1.00---1.00----1.00--------------------1.001.00-------1.00-1.00----1.00-------------1.00---------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAG..................................................22141.0041.00--3.001.001.00--1.00--2.00--2.00-1.00--1.001.00---1.00--------3.003.003.00----2.00--1.00-------1.00-2.00---1.00-1.00---2.00---1.00--------------1.00------1.001.00----------1.001.001.00--1.00-------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAGA.................................................23127.0041.00---1.001.00-1.00-2.00--------3.00-----1.00-1.00---1.00-----1.00-------1.00--1.00---------1.002.00-1.00---1.00-------------------1.00------1.00------------1.00-----1.001.00--------1.00-----1.00-----1.00-----
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGG.....................................................19114.0014.00-6.00--1.00---2.00---------2.001.00---------------1.00---------------------------1.00-------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................TGTGACCTGGTGGAAGTGGAA...................................................................................................2119.009.00---------------------------3.00---3.00------------------------------------1.00------------------1.00----------------1.00--------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAT..................................................2218.008.00--3.00--------------------1.00------------------------1.00--2.00-----------------1.00-------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCA...................................................2118.008.00------2.00-1.00-------------------------------2.00-1.00---------------------1.00-------------------------------------------------------------1.00----------
.................................................................................................................................................................................................................................................................................................................................................TGTGACCTGGTGGAAGTGGAAAGA................................................................................................2418.008.00--4.00-------------------1.00-------------------------------1.00-------------------1.00------------------------------------------1.00-------------------
.....................................................................................................................................................................................................................................................................................................................................................ACCTGGTGGAAGTGGAAAGACA..............................................................................................2216.006.004.00-----------------------------------------------------------------------1.00---------------------------------------------1.00------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAGTAT...............................................2516.0041.002.00-----------------------------------2.00------------------1.00----1.00----------------------------------------------------------------------------
..GATGACCTGCAGGAGGCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................1916.006.00-----6.00-----------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................TCTTTCTCTTGAACTTCTTCACTG........................................................2415.005.00---3.00---1.00--------------------------------------------------------------------------1.00------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCATT.................................................2315.008.00--------------------------------------2.00----------------------1.00---------------1.00-1.00---------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGC....................................................2015.005.00----1.00---------4.00--------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................TGACCTGGTGGAAGTGGAAAGA................................................................................................2214.004.00---------------------1.00-----------------------1.00---1.00-----------1.00---------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................TGTGACCTGGTGGAAGTGGAAAG.................................................................................................2314.004.00----1.00-----------------------2.00--------------------------------------------------------------------------------------1.00---------------------
..................................................................................................................................................................................................................................................................................................................................................GTGACCTGGTGGAAGTGGAAAGA................................................................................................2313.003.00----------------------------------------------------------------------1.00--------------------1.00--------------------1.00------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................TCTTTCTCTTGAACTTCTTCACT.........................................................2313.003.00-------2.00-----------------------------------------1.00---------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................ACTTCTTCACTGGGGCAGT.................................................193.000.00------------------------------3.00----------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAGAAA...............................................2513.0041.00------1.00---------------------------------------------------------------------------------------1.00----------------1.00-------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAA..................................................2212.008.00---------------1.001.00------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAAAA................................................2412.008.00-2.00---------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAGTAG...............................................2512.0041.00-------1.00---------------------------1.00-----------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................ACTGGGGCAGGACGAGGCAC........................................2012.002.00--------------------------2.00--------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................CGAGGCACGGATCCAGAAG.............................1912.002.00----------2.00------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAGTT................................................2412.0041.00------------------------------------------------------------------------------------------------------------------------1.00---1.00------------
................................................................................................................................................................................................................................................................................................................................................................................................................................CGGATCCAGAAGGTGACCAAGCG..................2312.002.00-------------------------2.00---------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................CTTGAACTTCTTCACTGGGGCAG..................................................2312.002.00------1.00-----------------1.00----------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAGC.................................................2312.0041.00-----------2.00-----------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................GGGAGCAGTGTTGTGTTCT......................................................................................................................................................................................................191.000.00--------------------1.00--------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................CTCTTTCTCTTGAACTTCTTCACT.........................................................2411.001.00------------------------1.00----------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................TGACCTGGTGGAAGTGGAAAGAT...............................................................................................2311.004.00------------------------------------------------------------------------------------------------------------------------------------1.00----
.AGATGACCTGCAGGAGGCCAACAAGCTCACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................311.000.00--------------------1.00--------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCCGC.................................................2311.005.00----1.00------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................TGGGAGGAGGAGCACGAGC...........................................................................................................................................................................................................................................................191.000.00------------------------------------------------------------------------------------------------1.00----------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................AGGCACGGATCCAGAGG.............................171.000.00--------------------1.00--------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................GTGACCTGGTGGAAGTGGAAAGAC...............................................................................................2411.001.00----------------------1.00------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAGAAT...............................................2511.0041.00----------------1.00------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................TGGTGGAAGTGGAAATTGT..............................................................................................191.000.00------------------------------------------------------------1.00----------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................GACCTGGTGGAAGTGCTT...................................................................................................181.000.00-------------------------------------------------------1.00---------------------------------------------------------------------------------
....................................................................TTCAGGCACGGGGTGAAT...................................................................................................................................................................................................................................................................................................................................................................................181.000.00---------------------------------------------------------------------1.00-------------------------------------------------------------------
...........CAGGAGGCCAACAAGCTTGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00-------------------------------------------------------------------------------------1.00---------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGAA...................................................2111.0014.00---------------1.00-------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAAT.................................................2311.008.00-----------------------------1.00-----------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................TGTGACCTGGTGGAAGTGGA....................................................................................................2011.001.00--------------------------------------------------------------------1.00--------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAGATT...............................................2511.0041.00---------------------------------------------------------------------------------------------------1.00-------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGATT..................................................2211.0014.00------------------------------------------------------------------------------1.00----------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAGTA................................................2411.0041.00------------------------------------------------------1.00----------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCTC..................................................2211.005.00------------------------------------------------------------------1.00----------------------------------------------------------------------
..GATGACCTGCAGGAGGCCAACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00--------------------------------------------------------------------------------------------1.00--------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAGAA................................................2411.0041.00-------------------------------------1.00---------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................GGTGTGACCTGGTGGAAGTGGAAA..................................................................................................2411.001.00--------------------------------------------------------------------------------------------------------------------------------1.00--------
........................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGTGACCAAGCGTCTGCA............2111.001.00---------------------------------------------------------------------------1.00-------------------------------------------------------------
....................................CCATGGTGAAGGAAGACG...................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00------------------------------------------------------------------------------------------------------------------1.00----------------------
.........................................................................................................................................................................................................................................................................................................................................................................................TCTTTCTCTTGAACTTCTTCACTGG.......................................................2511.001.00----1.00------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................ACGCTCTCTTTCTCTACA....................................................................181.000.00-------------------------------------------------------------------------------------------------------------------------1.00---------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCCGT.................................................2311.005.00---------------------------------------------------------------------------------------------------------------------------1.00-------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAGTTTT..............................................2611.0041.00--------------------------------------------------------------------------------------------------------------------1.00--------------------
...........................................................................................................................................................................................................................................................................................................................................................................................TTTCTCTTGAACTTCTTCACTGG.......................................................2311.001.00----------------------------------------------1.00------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAAA.................................................2311.008.00---------------------------------------------1.00-------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAATT................................................2411.008.00-----------------------------------------------------------------------------------------------1.00-----------------------------------------
.....GACCTGCAGGAGGCCAACTGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................221.000.00--------------------------------------------------------------------------------------------------------------------------1.00--------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................GCACGGATCCAGAAGGTGACCAAGCG..................2611.001.00-------------------------------------------------------------------1.00---------------------------------------------------------------------
.....................................................................................................................GCCCCGGACACGGGCAGG..................................................................................................................................................................................................................................................................................................................................181.000.00-----------------------------------------1.00-----------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................GGGAGCAGTGTTGTGAAAGCAGAAGTATAGAC.........................................................................................................................................................................................3211.001.00------1.00----------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................GGCACGGATCCAGAA..............................1511.001.00-----------------------------1.00-----------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................TCTTTCTCTTGAACTTCACTG...........................................................211.000.00---1.00-------------------------------------------------------------------------------------------------------------------------------------
...ATGACCTGCAGGAGGCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00----------------------------------------------------------------------------------------------------------------------------------1.00------
................................................................................................................................................................................................................................................................................................................................................................................................CTTGAACTTCTTCACTGGGGCAGTA................................................2511.002.00------------------------1.00----------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCATAT................................................2411.008.00-------------------------------------------1.00---------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAAGGTGACCAAGCGTCTGCACACG........2711.001.00---------------------------------------------------------------------------------------------------------------------------------1.00-------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGCAGAT................................................2411.0041.00----------------1.00------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................GATCCAGAAGGTGACCAAGCGTCT...............2411.001.00--------------------------------------------------------------------------------1.00--------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................TGACCTGGTGGAAGTGGACA..................................................................................................201.000.00-------------------------------------------------------------------------1.00---------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................TGTGACCTGGTGGAAGTGGAAAGT................................................................................................2411.004.00----------------------1.00------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTCTTCACTGGGGAAGT.................................................2311.0014.00---------1.00-------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................AGCACGGAAGAGAGG.................................................................................................................................................................................................................................1530.670.67--------------------0.67--------------------------------------------------------------------------------------------------------------------
..................................GTCCATGGTGAAGGA........................................................................................................................................................................................................................................................................................................................................................................................................................15100.100.10----------------------------------------------------------------------------------------------------------------------------------------0.10

Antisense strand
CAGATGACCTGCAGGAGGCCAACAAGCTCATCAAGTCCATGGTGAAGGAAGTGAGTGGGCCCCGGTCCTTCAGGCACGGGGTGGAGGAGCCCATGGCCACACAGCAGAAGCCGCTTTGCCCCGGACACGGGCCTGTTTTGTTCTCCCCTGCTGCCAGCTGCCCTACCTGTGCCCCGGTGGCTGAGAGTGGGAGGAGGAGCACAATAGCTTCCGCGGGAGCACGGAAGAGAGGAGTGGGTTGGGAGCAGTGTTGTGAAAGCAGAAGTATAGACTGGGCCCCAGGCACCCCACACTGAAAGGAGCTTCCGAGCGTCTGTACTTGTGTTGTGGGGTAAGGTGTGACCTGGTGGAAGTGGAAAGACAGTCAAGTGACGCTCTCTTTCTCTTGAACTTCTTCACTGGGGCAGGACGAGGCACGGATCCAGAAGGTGACCAAGCGTCTGCACACGTTAGAGGA
...................................................................................................................................................................................................................................................................................................................................................((.((..(((((((((((((((..(((....)))....))))))).....)))))..)))..)).))...................................................
............................................................................................................................................................................................................................................................................................................................................333.......................................................................407................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR189782SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR037941(GSM510479)
293DroshaTN. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189786SRR037939(GSM510477)
293cand5_rep1. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577739(Rovira)
total RNA. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029124(GSM416753)
HeLa. (hela)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR038861(GSM458544)
MM466. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		TAX577742(Rovira)
total RNA. (breast)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577746(Rovira)
total RNA. (breast)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577745(Rovira)
total RNA. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR038858(GSM458541)
MEL202. (cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		TAX577741(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189784SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR040040(GSM532925)
G612N. (cervix)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR191492(GSM715602)
154genomic small RNA (size selected RNA from . (breast)		SRR037938(GSM510476)
293Red. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR038856(GSM458539)
D11. (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR040035(GSM532920)
G001T. (cervix)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)		SRR040023(GSM532908)
G575T. (cervix)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM532873(GSM532873)
G699N. (cervix)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR191564(GSM715674)
87genomic small RNA (size selected RNA from t. (breast)		SRR189787SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
................................................................................................................................................................................................................................................................................................................................................................................................CTTGAACTTCTTCACCAAG...................................................... 191.000.00--------------------------------------------------------------------------------------1.00--------------------------------------------------
............................................................................................................................................TTCTCCCCTGCTGCCATTGG......................................................................................................................................................................................................................................................................................................... 201.000.00---1.00-------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................TGCTGCCAGCTGCCCTTGGG................................................................................................................................................................................................................................................................................................. 201.000.00---------------------------------------------------------------------------------------------1.00-------------------------------------------
.....................................................................................................................................TGTTTTGTTCTCCCCAAAT................................................................................................................................................................................................................................................................................................................. 191.000.00-----------------------------------------------------------------------------------------------------------1.00-----------------------------
..........................................................GCCCCGGTCCTTCAGGCTTT........................................................................................................................................................................................................................................................................................................................................................................................... 201.000.00------------------------------------------------------------------------------------1.00----------------------------------------------------
.........................GCTCATCAAGTCCATGG............................................................................................................................................................................................................................................................................................................................................................................................................................... 1711.001.00----------------------------------------------------------------1.00------------------------------------------------------------------------
.......................................................................................................................................................................................................................GGAGCACGGAAGAGATGGC............................................................................................................................................................................................................................... 191.000.00---1.00-------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................CCAGCTGCCCTACCTGTGCCCC.......................................................................................................................................................................................................................................................................................... 2211.001.00--------------------------1.00--------------------------------------------------------------------------------------------------------------
..........................................................GCCCCGGTCCTTCAG................................................................................................................................................................................................................................................................................................................................................................................................ 1540.500.50-------------------------------------------------------------------------------------------------------------------------------------0.250.25--
..........................................................GCCCCGGTCCTTCAGT............................................................................................................................................................................................................................................................................................................................................................................................... 160.500.00----------------------------------------------------------------------0.25--------------------------------------------------------------0.25---
..........................................................GCCCCGGTCCTTCA................................................................................................................................................................................................................................................................................................................................................................................................. 1450.200.20--------------------------------------------------------------------------------------------------------------------------------------0.20--
.....................................................................................................................................................................................................................................................................................................................................................................................GCTCTCTTTCTCTTGA.................................................................... 1690.110.11---------------------------------------------------------------------------------------------------------------------------------------0.11-
.............................................................................................................................................................................................................................................................................................................GCTTCCGAGCGT................................................................................................................................................ 12100.100.10-------------------------------------------------------------------------------------------------------------------------------------0.10---