ID: uc002gqu.15
GENE: MPRIP(15)
chr17:17075812-17076061+


(1)
AGO2.ip 		(3)
B-CELL 		(3)
BRAIN 		(8)
BREAST 		(20)
CELL-LINE 		(3)
CERVIX 		(2)
HEART 		(4)
LIVER 		(2)
OTHER 		(6)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
GAAGAATTCTCCCAGCCTGCACCCACCTCAGAGAATTGGTTCATGAGGGGCCAGCCTGTCATGCAAAATCCAACTGCTGATTGACTAAGCAAGCATCAGCAGTGGCAGGCGCCATCCCATTGTGTGGAGCTCCCCACCCCCACCCCTGTCAGCAGGAAGGGCGTGGTCCCTCGGTGCTGAGGCCGTGTCCTTGCCTGCAGCCATCGAAGCCATGAAGAACGCCCACCGGGAGGAAATGGAGCGGGAGCTG
.......................................................................................................................................................(((((((((((((((..(((((....))))))))))))))).)))))....................................................
..............................................................................................................................................143......................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR553576(SRX182782)
source: Testis. (testes)		SRR037937(GSM510475)
293cand2. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR189787SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR038857(GSM458540)
D20. (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR038859(GSM458542)
MM386. (cell line)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		GSM532878(GSM532878)
G691T. (cervix)		SRR390723(GSM850202)
total small RNA. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR029126(GSM416755)
143B. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR040039(GSM532924)
G531T. (cervix)		SRR444063(SRX128911)
Sample 20cDNABarcode: AF-PP-333: ACG CTC TTC . (cell line)		SRR189784SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR038863(GSM458546)
MM603. (cell line)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		TAX577745(Rovira)
total RNA. (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
...................................................................................................................................................GTCAGCAGGAAGGGCGTGGTC..................................................................................21119.0019.00-8.006.00--3.00---------1.00-----------------------------1.00-------
....................................................................................................................................................TCAGCAGGAAGGGCGTGGTCC.................................................................................2114.004.00---2.00-------------1.00----------------------1.00------------
.............................................................................................................................................................................................................................CCCACCGGGAGGAAATGGAGC........2114.004.00----4.00------------------------------------------------
...................................................................................................................................................GTCAGCAGGAAGGGCGTGGTCA.................................................................................2213.0019.00----------------------------------1.00---1.00---1.00----------
....................................................................................................................................................................................................................TGAAGAACGCCCACCGGGAGGAAATGGAGC........3013.003.003.00----------------------------------------------------
...................................................................................................................................................GTCAGCAGGAAGGGCGTGG....................................................................................1912.002.00---2.00-------------------------------------------------
...................................................................................................................................................GTCAGCAGGAAGGGCGTGGAAT.................................................................................2212.002.00--------2.00--------------------------------------------
....................................................................................................................................................TCAGCAGGAAGGGCGTGGT...................................................................................1912.002.00------1.00--------------------1.00-------------------------
.....................................................................................................................................................CAGCAGGAAGGGCGTGGTCCAT...............................................................................222.000.00----------------------1.001.00-----------------------------
...................................................................................................................................................................................AGGCCGTGTCCTTGCCTGCAG..................................................2112.002.00--------------------------1.00-1.00------------------------
....................................................................................................................................................TCAGCAGGAAGGGCGTGGTAT.................................................................................2112.002.00-------------1.00-------1.00-------------------------------
....................................................................................................................................................TCAGCAGGAAGGGCGTGG....................................................................................1811.001.00-----------------------------------------1.00-----------
....................................................................................................................................................TCAGCAGGAAGGGCGTGGCCC.................................................................................2111.001.00---------1.00-------------------------------------------
.............................................................................................................................................................................................................................CCCACCGGGAGGAAATGGAGCGGGAGC..2711.001.001.00----------------------------------------------------
..........................................................................................................................................................GGAAGGGCGTGGTCCCTAA.............................................................................191.000.00-------------------------------1.00---------------------
....................................................................................................................................................................................................................TGAAGAACGCCCACCGGGAGGAAAT.............2511.001.001.00----------------------------------------------------
...................................................................................................................................................GTCAGCAGGAAGGGCGTGGTCT.................................................................................2211.0019.00-------------------1.00---------------------------------
.................................................................................................................................................................................TGAGGCCGTGTCCTTGCCTCT....................................................211.000.00----------------------------------------------1.00------
....................................................................................................................................................TCAGCAGGAAGGGCGTGGTCCCCT..............................................................................241.000.00---------1.00-------------------------------------------
...................................................................................................................................................GTCAGCAGGAAGGGCGTGATA..................................................................................211.000.00--------------------------------------------1.00--------
...........................................................................................................................................................................................................TCGAAGCCATGAAGAACGCCCACCG......................2521.001.001.00----------------------------------------------------
...................................................................................................................................................................................AGGCCGTGTCCTTGCCTGCAGT.................................................2211.002.00------------------1.00----------------------------------
....................................................................................................................................................................................................................TGAAGAACGCCCACCGGGAGGAAATGG...........2711.001.001.00----------------------------------------------------
....................................................................................................................................................TCAGCAGGAAGGGCGTGGTCCA................................................................................2211.004.00-------------------------------------------1.00---------
...................................................................................................................................................................................AGGCCGTGTCCTTGCCTGCAGTAG...............................................2411.002.00-----------1.00-----------------------------------------
................................................................................................................................................................................................................................ACCGGGAGGAAATGGAGGCA......201.000.00---------------------------------1.00-------------------
.............................................................................................................................................................................................................GAAGCCATGAAGAACTACA..........................191.000.00----------1.00------------------------------------------
.....................................................................................................................................................CAGCAGGAAGGGCGTGGAATA................................................................................2111.001.00------------1.00----------------------------------------
....................................................................................................................................................TCAGCAGGAAGGGCGTGGAA..................................................................................2011.001.00-----------------------------1.00-----------------------
.....................................................................................................................................................CAGCAGGAAGGGCGTGGTC..................................................................................1911.001.00----------------1.00------------------------------------
...........................................TGAGGGGCCAGCCTGTCATGCAAAACCC...................................................................................................................................................................................281.000.00------------------------1.00----------------------------
...................................................................................................................................................GTCAGCAGGAAGGGCGTAGTC..................................................................................211.000.00-1.00---------------------------------------------------
.........................................................................................................................................................................................................................AACGCCCACCGGGAGGAAAT.............2011.001.00-----------------------------------1.00-----------------
.....................................................................................................................................................CAGCAGGAAGGGCGTGG....................................................................................1711.001.00------------------------------1.00----------------------
.........................................................................................................................................................AGGAAGGGCGTGGTCGGTG..............................................................................191.000.00------1.00----------------------------------------------
....................................................................................................................................................................................................................TGAAGAACGCCCACCGGGAGGAAATGGA..........2811.001.001.00----------------------------------------------------
.......................................................................................................................................................GCAGGAAGGGCGTGGTC..................................................................................1711.001.00------------------------------------1.00----------------
...................................................................................................................................................GTCAGCAGGAAGGGCGTGGTCTAT...............................................................................2411.0019.00--------------------------------1.00--------------------
.....................................................................................................................................................................................................CAGCCATCGAAGCCATGAAGAA...............................2221.001.00--------------------1.00--------------------------------
.....................................................................................................................................................................................................................................GAGGAAATGGAGCGGGACA..191.000.00-------------------------1.00---------------------------
..................................................................................................................................................................................................................................CGGGAGGAAATGGAGC........1630.670.67---------------------------------------------------0.330.33
...............................................................................................................................................................................................................AGCCATGAAGAACGCCCACCGGGAG..................2520.500.50----------0.50------------------------------------------
.................................................................................................................................................................................................................CCATGAAGAACGCCCACCGGGAGG.................2420.500.500.50----------------------------------------------------
............................................................................................................................................................................................................CGAAGCCATGAAGAACGCCCACCG......................2420.500.50--------------0.50--------------------------------------
...........................................................................................................................................................................................................TCGAAGCCATGAAGAACGCCCACCGG.....................2620.500.500.50----------------------------------------------------
..................................................................................................................................................................................................................CATGAAGAACGCCCACCGGGAGG.................2320.500.50-------------------------------------------------0.50---
..................................................................................................................................................................................................................CATGAAGAACGCCCACCGG.....................1920.500.500.50----------------------------------------------------
...................................................................................................................................................................................................................ATGAAGAACGCCCACCGGG....................1920.500.50--------------0.50--------------------------------------
.........................................................................................................................................................................................................CATCGAAGCCATGAAGAACGCCCAC........................2520.500.50--------------------------------------------------0.50--
......................................................................................................................................................................................................AGCCATCGAAGCCATGAAG.................................1920.500.50----------0.50------------------------------------------
...................................................................................................................................................................................................................ATGAAGAACGCCCACCGGGAG..................2120.500.50-----------0.50-----------------------------------------
..........................................................................................................................................................................................................ATCGAAGCCATGAAGAACGCCCACCGGGAGG.................3120.500.50-----------------------------------------------0.50-----
....................................................................................................................................................................................................................TGAAGAACGCCCACCGG.....................1720.500.50------------0.50----------------------------------------
...................................................................................................................................................................................................................ATGAAGAACGCCCACC.......................1630.330.33-----------0.33-----------------------------------------

Antisense strand
GAAGAATTCTCCCAGCCTGCACCCACCTCAGAGAATTGGTTCATGAGGGGCCAGCCTGTCATGCAAAATCCAACTGCTGATTGACTAAGCAAGCATCAGCAGTGGCAGGCGCCATCCCATTGTGTGGAGCTCCCCACCCCCACCCCTGTCAGCAGGAAGGGCGTGGTCCCTCGGTGCTGAGGCCGTGTCCTTGCCTGCAGCCATCGAAGCCATGAAGAACGCCCACCGGGAGGAAATGGAGCGGGAGCTG
.......................................................................................................................................................(((((((((((((((..(((((....))))))))))))))).)))))....................................................
..............................................................................................................................................143......................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR553576(SRX182782)
source: Testis. (testes)		SRR037937(GSM510475)
293cand2. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR189787SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR038857(GSM458540)
D20. (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR038859(GSM458542)
MM386. (cell line)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		GSM532878(GSM532878)
G691T. (cervix)		SRR390723(GSM850202)
total small RNA. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR029126(GSM416755)
143B. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR040039(GSM532924)
G531T. (cervix)		SRR444063(SRX128911)
Sample 20cDNABarcode: AF-PP-333: ACG CTC TTC . (cell line)		SRR189784SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR038863(GSM458546)
MM603. (cell line)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		TAX577745(Rovira)
total RNA. (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
..AGAATTCTCCCAGCCTCTG..................................................................................................................................................................................................................................... 191.000.00---------------------------------------1.00-------------
.........TCCCAGCCTGCACCCACCTCAG........................................................................................................................................................................................................................... 2211.001.00-------1.00---------------------------------------------
..............................................................................................................................GAGCTCCCCACCCCCACTG......................................................................................................... 191.000.00-------1.00---------------------------------------------
.................................................................................................................................................................................TGAGGCCGTGTCCTTTCCG...................................................... 191.000.00-------------------------------------1.00---------------
.......................................................................................................................................................................................................GCCATCGAAGCCATGAAGAACGCCCA......................... 2620.500.500.50----------------------------------------------------
.........................................................................................................................................................................................................CATCGAAGCCATGAAGA................................ 1720.500.50------------------------------------------------0.50----