ID: uc002elz.7
GENE: GPR56(7)
chr16:57690134-57690475+


(1)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(1)
AGO2.ip 		(5)
B-CELL 		(4)
BRAIN 		(8)
BREAST 		(23)
CELL-LINE 		(4)
CERVIX 		(1)
FIBROBLAST 		(2)
HEART 		(2)
HELA 		(2)
LIVER 		(2)
OTHER 		(35)
SKIN 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
ACAGAAGAATGTGACTCTGCAATGTGTGTTCTGGGTTGAAGACCCCACATGTGAGTATGCAGGGGTCTCTGGGCTGGACAAGTATCTGGAAGAGAAATAGAGTCCTGGGGGGTGGGGGAGGTGGGGTTAATCACCGAGGGCTTCCTGGAGAAAGGAGGACTTTGAAGAGAGAGCGATGGCAGGCTATGAGTAGGCCGGGTGGAAGAATGACACAGTCGTGCTTTTGGGGGTGGACACAGTGGGGTCCTGGAGGACTGGACTTGATTGGAGCCCCGTGCTGTCCCCTCCTCAGTGAGCAGCCCGGGGCATTGGAGCAGTGCTGGGTGTGAGACCGTCAGGAGA
.................................................................................................................................................................................................................................(((((.(((((((.((((((((..(((.......)))....))).))))))).))))))))))......................................................
.........................................................................................................................................................................................................................218.......................................................................292................................................
SizePerfect hitTotal NormPerfect NormSRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR038863(GSM458546)
MM603. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR029129(GSM416758)
SW480. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038861(GSM458544)
MM466. (cell line)		SRR038860(GSM458543)
MM426. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR029130(GSM416759)
DLD2. (cell line)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038859(GSM458542)
MM386. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577738(Rovira)
total RNA. (breast)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038862(GSM458545)
MM472. (cell line)		SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		SRR189786SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532886(GSM532886)
G850T. (cervix)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR040010(GSM532895)
G529N. (cervix)		TAX577739(Rovira)
total RNA. (breast)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)		SRR029124(GSM416753)
HeLa. (hela)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR038855(GSM458538)
D10. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577740(Rovira)
total RNA. (breast)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR189784SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR040035(GSM532920)
G001T. (cervix)		SRR040039(GSM532924)
G531T. (cervix)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
............................................................................................................................................................................................................................................................................AGCCCCGTGCTGTCCCCTCCTCA...................................................2316.006.00--2.00--------------------1.00-----------------1.00----------------1.00--1.00-----------------------------
..............................................................................................................................................................................................................................TTTGGGGGTGGACACAGTGGGG..................................................................................................2216.006.00---1.00-4.00----------------1.00--------------------------------------------------------------------
..............................................................................................................................................................................................................................TTTGGGGGTGGACACAGTGGG...................................................................................................2115.005.00-1.00-2.00-------1.00-------------1.00-----------------------------------------------------------------
....AAGAATGTGACTCTGGCA................................................................................................................................................................................................................................................................................................................................185.000.00-5.00-----------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................TTTGGGGGTGGACACAGTGGGGTAT...............................................................................................2515.004.00----1.00-----1.00------1.00------------1.00-----------------------1.00------------------------------------
............................................................................................................................................................................................................................................................................AGCCCCGTGCTGTCCCCTCCTCAGT.................................................2515.005.00----------------1.00--------1.00-----------1.00-----1.001.00----------------------------------------------
............................................................................................................................................................................................................................................................................AGCCCCGTGCTGTCCCCTCC......................................................2014.004.00-------3.00-------------------------------------------1.00---------------------------------------
..............................................................................................................................................................................................................................TTTGGGGGTGGACACAGTGGGGT.................................................................................................2314.004.00-1.00--1.00-----------------1.00------1.00-------------------------------------------------------------
...............................................................................................................................................................................................................................TTGGGGGTGGACACAGTGG....................................................................................................1933.673.67--0.670.67---------0.67-1.33-----------------------------------------------------------0.33---------------
..............................................................................................................................................................................................................................TTTGGGGGTGGACACAGTGGGA..................................................................................................2213.005.00-2.001.00----------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................TTTGGGGGTGGACACAGTGG....................................................................................................2033.003.00-0.67-----0.330.33----1.33--------------------------------------------------------------0.33--------------
.......................................................................................................................................................................................................................................................TGGAGGACTGGACTTGATTGG..........................................................................2113.003.00--3.00----------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................TTGGGGGTGGACACAGTGGGGT.................................................................................................2212.002.00--1.00-------1.00--------------------------------------------------------------------------------
......................TGTGTGTTCTGGGTTGAAGA............................................................................................................................................................................................................................................................................................................2012.002.002.00------------------------------------------------------------------------------------------
......................TGTGTGTTCTGGGTTGAAGAC...........................................................................................................................................................................................................................................................................................................2112.002.00------------2.00------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................CCGTGCTGTCCCCTCCTCAGAAAA..............................................242.000.00---------2.00---------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................ACTGGACTTGATTGGAGCC......................................................................1912.002.00--------2.00----------------------------------------------------------------------------------
.......................GTGTGTTCTGGGTTGAAGA............................................................................................................................................................................................................................................................................................................1912.002.002.00------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................AGCCCCGTGCTGTCCCCTCCTCAGTATT..............................................2812.005.00------------------2.00------------------------------------------------------------------------
..............................................................................................................................................................ACTTTGAAGAGAGAGTTCT.....................................................................................................................................................................1902.001.00---------------------------------------1.001.00--------------------------------------------------
...............................................................................................................................................................................................................................TTGGGGGTGGACACAGTGGG...................................................................................................2012.002.00--1.00-----------------------------------------------------------1.00----------------------------
....................................................................................................................................................................................................................................................TCCTGGAGGACTGGAGTGA...............................................................................192.000.00------2.00------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................AGCCCCGTGCTGTCCCCTCCTCAG..................................................2412.002.00-1.00-------------------------------------------------------1.00---------------------------------
...........................................................................................................................................................AGGACTTTGAAGAGAGAG.........................................................................................................................................................................1821.501.50------------------------------------------------------------------0.500.50---0.50-------------------
............................................................................................................................................................GGACTTTGAAGAGAGAG.........................................................................................................................................................................1741.251.25---------------------------0.25-----------------------------------------0.50-------0.25---0.25---------
...........................................................................................................................................................AGGACTTTGAAGAGAG...........................................................................................................................................................................1651.201.20----------------0.20-------------------------------------------------------0.40-----------0.200.200.20----
......................................................................................................................................................................................................GTGGAAGAATGACACAGTCGTG..........................................................................................................................2211.001.00-----------------------------------1.00-------------------------------------------------------
...............................................................................................................................................................................................................................TTGGGGGTGGACACAGTGGGGTC................................................................................................2311.001.00----1.00--------------------------------------------------------------------------------------
..............................................................................................................................................................ACTTTGAAGAGAGAG.........................................................................................................................................................................1501.001.00----------------------------------------------1.00--------------------------------------------
............................................................................................................................................................................................................................................................................AGCCCCGTGCTGTCCCCTCCTAA...................................................2311.001.00-----------------------1.00-------------------------------------------------------------------
.....................ATGTGTGTTCTGGGTTGAAGACC..........................................................................................................................................................................................................................................................................................................2311.001.00----------------1.00--------------------------------------------------------------------------
................CTGCAATGTGTGTTCTGGGTTGAAGACCC.........................................................................................................................................................................................................................................................................................................2911.001.001.00------------------------------------------------------------------------------------------
....................AATGTGTGTTCTGGGTTGAAG.............................................................................................................................................................................................................................................................................................................2111.001.001.00------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................TGGACTTGATTGGAGCCCCGTGCTGTC............................................................2711.001.001.00------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................ACTGGACTTGATTGGTGCC......................................................................191.000.00--------1.00----------------------------------------------------------------------------------
..............................................................................................................................................................................................................................TTTGGGGGTGGACACAGTGGGGTAA...............................................................................................2511.004.00------------------------------------------------1.00------------------------------------------
..............................................................................................................................................................................................................................TTTGGGGGTGGACACAATGG....................................................................................................201.000.00-----------------------------------------------------1.00-------------------------------------
................................................................................................................................................................................................................................TGGGGGTGGACACAGTGGGGTAT...............................................................................................2311.001.00--------------------------------------------------------1.00----------------------------------
....................................................................................................................................................................................................................................................................TTGATTGGAGCCCCGTGCTGTCC...........................................................2311.001.00-----------------------------------------------------------1.00-------------------------------
.............................................................................................................................................................................................................................TTTTGGGGGTGGACACAGTGGGA..................................................................................................231.000.00---------------------------------------------------------------1.00---------------------------
.....................................................................................................................................................................................................................................................CCTGGAGGACTGGACTTGATTGGAG........................................................................2511.001.00--1.00----------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................AGCAGTGCTGGGTGTGAGACCGTCAGGAG.2911.001.00---------------------------1.00---------------------------------------------------------------
............................................................................................................................................................................................................................................................................AGCCCCGTGCTGTCCCCTCCTCAT..................................................2411.006.00----------1.00--------------------------------------------------------------------------------
...............................................................................................................................................................................................................................TTGGGGGTGGACACAGTGGGGTAT...............................................................................................2411.002.00--------------1.00----------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................CCCGGGGCATTGGAGCAGTGCTGGGTGTG..............2911.001.00------------------------1.00------------------------------------------------------------------
............................................................................................................................................................................................................................................................................AGCCCCGTGCTGTCCCCTCCTCT...................................................231.000.00--------------------------------------------------1.00----------------------------------------
..............................................................................................................................................................................................................................TTTGGGGGTGGACACAGTGGGGTT................................................................................................2411.004.00---1.00---------------------------------------------------------------------------------------
..........................................................................................................................................................GAGGACTTTGAAGAGGAAG.........................................................................................................................................................................191.000.00-------------------------------------------------1.00-----------------------------------------
..................GCAATGTGTGTTCTGGGTTGAAGAC...........................................................................................................................................................................................................................................................................................................2511.001.00--------------------------1.00----------------------------------------------------------------
..............................................................................................................................................................ACTTTGAAGAGAGAGTCCA.....................................................................................................................................................................1901.001.00------------------------------------------------------------1.00------------------------------
..........GTGACTCTGCAATGTGTGTTCTGGGTTGAAGACC..........................................................................................................................................................................................................................................................................................................3411.001.001.00------------------------------------------------------------------------------------------
..............................................................................................................................................................ACTTTGAAGAGAGAGGTCA.....................................................................................................................................................................1901.001.00---------------------1.00---------------------------------------------------------------------
......................................................................................................................................................AAAGGAGGACTTTGAAGGA.............................................................................................................................................................................191.000.00------------------------1.00------------------------------------------------------------------
...........................................................................................................................................................................................................................GCTTTTGGGGGTGGACACAGTGG....................................................................................................2311.001.001.00------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................TTTTGGGGGTGGACACAGTGA....................................................................................................211.000.00------------------------------------------1.00------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................TGGAGCAGTGCTGGGTGTGAGGC..........231.000.00-------------------1.00-----------------------------------------------------------------------
...............................................................................................................................................................................................................................TTGGGGGTGGACACAGTGGGGTTT...............................................................................................2411.002.00--------------------------------------1.00----------------------------------------------------
................................................................................................................................................CTGGAGAAAGGAGGACTTTGAAGAG.............................................................................................................................................................................2511.001.00----------------------------------------------------1.00--------------------------------------
...........................................................................................................................................................AGGACTTTGAAGAGAGAAA........................................................................................................................................................................1921.000.50----------------------------------------------------------------1.00--------------------------
..............................................................................................................................................................ACTTTGAAGAGAGAGTTGG.....................................................................................................................................................................1901.001.00--------------------1.00----------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................TGAGCAGCCCGGGGCATTGGAGCAGTGC......................2811.001.001.00------------------------------------------------------------------------------------------
.................TGCAATGTGTGTTCTGGGT..................................................................................................................................................................................................................................................................................................................1911.001.001.00------------------------------------------------------------------------------------------
......................................................................................................................................................AAAGGAGGACTTTGAAGACTG...........................................................................................................................................................................211.000.00-------------------1.00-----------------------------------------------------------------------
................................................................................................................................................................................................................................TGGGGGTGGACACAGTGGGGT.................................................................................................2111.001.00---------------1.00---------------------------------------------------------------------------
.....................ATGTGTGTTCTGGGTTGAAGAC...........................................................................................................................................................................................................................................................................................................2211.001.001.00------------------------------------------------------------------------------------------
..............................................................................................................................................................ACTTTGAAGAGAGAGTTT......................................................................................................................................................................1801.001.00----------------------------------1.00--------------------------------------------------------
......................................................................................................................................................AAAGGAGGACTTTGAAGAGAGAGCGATG....................................................................................................................................................................2811.001.001.00------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................TTTGGGGGTGGACACAGTGGGGTAAT..............................................................................................2611.004.00----1.00--------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................TTGGGGGTGGACACAGTGGGAT.................................................................................................2211.002.00--------------------1.00----------------------------------------------------------------------
............................................................................................................................................................................................................................................................................AGCCCCGTGCTGTCCCCTCCTAAT..................................................2411.001.00-------------------------------------------------------1.00-----------------------------------
.......................................................................................................CCTGGGGGGTGGGGGAGGGGAA.........................................................................................................................................................................................................................221.000.00------1.00------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................AGCCCCGTGCTGTCCCCTCCACA...................................................2311.004.00----1.00--------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................TTGGGGGTGGACACAGTGGGG..................................................................................................2111.001.00-1.00-----------------------------------------------------------------------------------------
....................AATGTGTGTTCTGGGTTGAAGACCCCAC......................................................................................................................................................................................................................................................................................................2811.001.00---------1.00---------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................AGCCCCGTGCTGTCCCCT........................................................1811.001.00-----------------------------------------------------------------1.00-------------------------
...GAAGAATGTGACTCTGCAATGTGT...........................................................................................................................................................................................................................................................................................................................2411.001.00---1.00---------------------------------------------------------------------------------------
.............ACTCTGCAATGTGTGTTCTGGGTTGAAGACC..........................................................................................................................................................................................................................................................................................................3111.001.00------------1.00------------------------------------------------------------------------------
.......AATGTGACTCTGCAATGTGTG..........................................................................................................................................................................................................................................................................................................................2111.001.00---------------------------------1.00---------------------------------------------------------
............................................................................................................................................................................................................................................................................AGCCCCGTGCTGTCCCCTCCT.....................................................2111.001.001.00------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................TTGGGGGTGGACACAGTGGGGTCGA..............................................................................................2511.001.00-----------1.00-------------------------------------------------------------------------------
................................................................................................................................................................................................................................TGGGGGTGGACACAGTGTAA..................................................................................................201.000.00---------------------1.00---------------------------------------------------------------------
....................................................................................................................................................................AAGAGAGAGCGATGGCA.................................................................................................................................................................1711.001.00-----------------------------------------------1.00-------------------------------------------
...............................................................................................................................................................................................................................TTGGGGGTGGACACAGTGGGGTTA...............................................................................................2411.002.00-----------1.00-------------------------------------------------------------------------------
...............................................................................................................................................................................................................................TTGGGGGTGGACACAGTGGGGTACT..............................................................................................2511.002.00--------------1.00----------------------------------------------------------------------------
...............................................................................................................................................................................................................................TTGGGGGTGGACACAGTGGGGTATTA.............................................................................................2611.002.00-----------------1.00-------------------------------------------------------------------------
..............................................................................................................................................................................................................................TTTGGGGGTGGACACAGTGGAG..................................................................................................2230.673.00-------------0.67-----------------------------------------------------------------------------
...............................................................................................................................................................................................................................TTGGGGGTGGACACAGTGGA...................................................................................................2030.673.67-0.67-----------------------------------------------------------------------------------------
...........................................................................................................................................................AGGACTTTGAAGAGAGAGTTC......................................................................................................................................................................2120.501.50--------------------------------------------------------------------0.50----------------------
...........................................................................................................................................................AGGACTTTGAAGAGAGAGT........................................................................................................................................................................1920.501.50------------------------------------0.50------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................TGTGAGACCGTCAG....1420.500.50--------------------------0.50----------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................TGAGACCGTCAGGAGA1620.500.50-0.50-----------------------------------------------------------------------------------------
...........................................................................................................................................................AGGACTTTGAAGAGAGA..........................................................................................................................................................................1720.500.50----------------------------------------------------------------------0.50--------------------
...........................................................................................................................................................................................GAGTAGGCCGGGTGGA...........................................................................................................................................1620.500.50------------------------------------0.50------------------------------------------------------
.................................................................................................................................................................................................................................GGGGGTGGACACAGTGG....................................................................................................1750.400.40-0.40-----------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................TTTTGGGGGTGGACACAGTGG....................................................................................................2130.330.33-----0.33-------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................TTTGGGGGTGGACACAGTGGT...................................................................................................2130.333.00--------------0.33----------------------------------------------------------------------------
...............................................................................................................................................................................................................................TTGGGGGTGGACACAGTGGAA..................................................................................................2130.333.67--------------------------------------------------------------------------0.33----------------
..............................................................................................................................................................................................................................TTTGGGGGTGGACACAGTGGA...................................................................................................2130.333.00--0.33----------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................TTTGGGGGTGGACACAG.......................................................................................................1730.330.33-------------------------------------------------------------------------0.33-----------------
................................................................................................................................................................................................................................TGGGGGTGGACACAGTGG....................................................................................................1830.330.33--0.33----------------------------------------------------------------------------------------
.............................................................................................................................................................GACTTTGAAGAGAGAG.........................................................................................................................................................................1680.250.25---------------------------0.12--------------------------------------------------------------0.12
............................................................................................................................................................GGACTTTGAAGAGAGAGT........................................................................................................................................................................1840.251.25----------------------------------------------------------------------------------0.25--------
..............................................................................................................................................................ACTTTGAAGAGAGAGCTCAA....................................................................................................................................................................2040.250.25----------------------------0.25--------------------------------------------------------------
..........................................................................................................................................................................................................................................................AGGACTGGACTTGAT.............................................................................1540.250.25--------------------------------------------------------------------------------0.25----------
..............................................................................................................................................................ACTTTGAAGAGAGAGC........................................................................................................................................................................1640.250.25-------------------------------------------------------------------------------0.25-----------
............................................................................................................................................................................................................................................................................AGCCCCGTGCTGTCC...........................................................1540.250.25------------------------------------------------------------------------------0.25------------
.............................................................................................................................................................GACTTTGAAGAGAGAGTTCA.....................................................................................................................................................................2080.120.25-----------------------------------------------------------------------------------------0.12-
.............................................................................................................................................................GACTTTGAAGAGAGAGTTT......................................................................................................................................................................1980.120.25---------------------------------------------------------------------------------------0.12---
.............................................................................................................................................................GACTTTGAAGAGAGAGTAA......................................................................................................................................................................1980.120.25----------------------------------------------------------------------------------------0.12--

Antisense strand
ACAGAAGAATGTGACTCTGCAATGTGTGTTCTGGGTTGAAGACCCCACATGTGAGTATGCAGGGGTCTCTGGGCTGGACAAGTATCTGGAAGAGAAATAGAGTCCTGGGGGGTGGGGGAGGTGGGGTTAATCACCGAGGGCTTCCTGGAGAAAGGAGGACTTTGAAGAGAGAGCGATGGCAGGCTATGAGTAGGCCGGGTGGAAGAATGACACAGTCGTGCTTTTGGGGGTGGACACAGTGGGGTCCTGGAGGACTGGACTTGATTGGAGCCCCGTGCTGTCCCCTCCTCAGTGAGCAGCCCGGGGCATTGGAGCAGTGCTGGGTGTGAGACCGTCAGGAGA
.................................................................................................................................................................................................................................(((((.(((((((.((((((((..(((.......)))....))).))))))).))))))))))......................................................
.........................................................................................................................................................................................................................218.......................................................................292................................................
SizePerfect hitTotal NormPerfect NormSRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR038863(GSM458546)
MM603. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR029129(GSM416758)
SW480. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038861(GSM458544)
MM466. (cell line)		SRR038860(GSM458543)
MM426. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR029130(GSM416759)
DLD2. (cell line)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038859(GSM458542)
MM386. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577738(Rovira)
total RNA. (breast)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038862(GSM458545)
MM472. (cell line)		SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		SRR189786SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532886(GSM532886)
G850T. (cervix)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR040010(GSM532895)
G529N. (cervix)		TAX577739(Rovira)
total RNA. (breast)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)		SRR029124(GSM416753)
HeLa. (hela)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR038855(GSM458538)
D10. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577740(Rovira)
total RNA. (breast)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR189784SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR040035(GSM532920)
G001T. (cervix)		SRR040039(GSM532924)
G531T. (cervix)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
................................................................................................................................................................................................................................................................................................TCAGTGAGCAGCCCGGG..................................... 1711.001.00----------------------------1.00--------------------------------------------------------------
............................................................................................................................................................GGACTTTGAAGAGAGCAGG....................................................................................................................................................................... 191.000.00---------------------------------------------1.00---------------------------------------------
....AAGAATGTGACTCTGCAATGTGTGT......................................................................................................................................................................................................................................................................................................................... 2511.001.00-------------------------------1.00-----------------------------------------------------------
....................................................................................................................................................................................................................................................TCCTGGAGGACTGGAGCTC............................................................................... 191.000.00------1.00------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................TGGGTGTGAGACCGTCC..... 171.000.00--------------------------------1.00----------------------------------------------------------
............................................................................................................................................................................................AGTAGGCCGGGTGG............................................................................................................................................ 1480.120.12-----------------------------------------------------------------------------------0.12-------
..........................................................................................................................................................................................................................................................................................................................CAGTGCTGGGTGTGAG............ 1690.110.11-----------------------------------------------------------------------------------0.11-------