ID: uc002egp.17
GENE: CYLD(17)
chr16:50830035-50830284+


(3)
AGO1.ip
(1)
AGO2.ip
(2)
AGO3.ip
(17)
B-CELL
(14)
BRAIN
(17)
BREAST
(27)
CELL-LINE
(3)
CERVIX
(1)
FIBROBLAST
(8)
HEART
(3)
HELA
(1)
KIDNEY
(9)
LIVER
(3)
OTHER
(53)
SKIN
(4)
UTERUS
(1)
XRN.ip

Sense strand
TGGCCCCAGAATCCTTTCAGAAACCAAGAAATGAGAATATGTCAAGGGTTAAAGGAGGCTTTCACTTCCAGAAATCAGAAGTAAAATAAAGGCTTTTAGAGCCTGAAATTAGCTTTTTGGAAATGATAGGATTATAAAATCACTGGCAAAAGGGTTTAGAACTTGACTGCCCTATAAAGAGTTCTTCCTCTGTGCCATAGGTGGTCAGAATGGCTTCAACATTCCTCAAGTCACCCCATGCCCAGAAGTA
...............................................................................................................................................(((((...(((...(((((((..............))))))).)))...))))).....................................................
...........................................................................................................................................140.........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
TAX577739(Rovira)
total RNA. (breast)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577740(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191451(GSM715561)
177genomic small RNA (size selected RNA from . (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038859(GSM458542)
MM386. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR038858(GSM458541)
MEL202. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040011(GSM532896)
G529T. (cervix)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR189783SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR189784DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
TAX577580(Rovira)
total RNA. (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR191543(GSM715653)
124genomic small RNA (size selected RNA from . (breast)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)
SRR191506(GSM715616)
146genomic small RNA (size selected RNA from . (breast)
SRR191587(GSM715697)
50genomic small RNA (size selected RNA from t. (breast)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR040006(GSM532891)
G601N. (cervix)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR191515(GSM715625)
4genomic small RNA (size selected RNA from to. (breast)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR040029(GSM532914)
G026T. (cervix)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR038855(GSM458538)
D10. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR038860(GSM458543)
MM426. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.............................................................................................................................................ACTGGCAAAAGGGTTTAGAACTT......................................................................................231161.00161.0017.002.00-1.001.006.002.004.001.002.00-3.005.002.002.004.003.004.001.003.003.00--2.00-3.001.004.003.00-3.001.002.00-2.00-3.003.00--1.003.003.003.00----2.002.00-1.001.001.001.001.001.001.001.001.002.002.003.00--1.002.00--2.002.00----1.00-2.00--1.00----1.00--2.001.00-1.001.00--1.00-1.00-1.001.00-1.00---1.00-1.00----1.001.001.00---------1.001.00---------1.001.00-1.001.00---1.00-1.001.00-------1.00----1.00-
.............................................................................................................................................ACTGGCAAAAGGGTTTAGAACT.......................................................................................221123.00123.00-6.00-4.004.003.005.002.002.00--3.001.002.002.001.003.00-1.003.00-2.003.003.001.00---1.003.001.003.002.004.00---1.002.004.00--1.00---2.00-1.00---2.001.001.001.001.002.001.00-1.00------3.00-----1.001.00-2.00-----1.00----1.00--1.001.00-1.001.001.00--2.001.00-2.00-1.00---1.00---1.00----1.00---1.001.001.00------1.001.00-1.00--------1.00------1.00-1.001.00----1.001.001.001.00--
............................................................................................................................................CACTGGCAAAAGGGTTTAGAACT.......................................................................................23136.0036.00--6.00---1.00--2.00---1.00---1.001.00-1.001.001.00---1.00-----------1.00-1.00-----1.00----1.00---1.00---1.00----------1.002.002.00--1.00---------1.00----1.00--1.00------1.00--------1.00---------1.00-----------1.00-----------------1.00------------
.............................................................................................................................................ACTGGCAAAAGGGTTTAGAAC........................................................................................21126.0026.00-1.00-5.005.00--1.001.00------------1.00------------------------------------1.00------1.00-------1.001.00-----1.00-1.00-1.00-1.00--1.00---------------------------------1.00-----------1.00---------1.00----------------
............................................................................................................................................CACTGGCAAAAGGGTTTAGAACTT......................................................................................24117.0017.001.00------1.00-1.00----2.00---1.00--1.00--1.00--1.00------1.00--------------1.00------1.00--------1.00--------------------------------------1.00-------------1.00--------------1.00--------1.00-------------------
............................................................................................................................................CACTGGCAAAAGGGTTTAGAAC........................................................................................22112.0012.00---------1.00---1.00----1.00-1.00---2.00-2.00---------1.00----------------1.00-------1.00------------------------------------------------------------------------------------------1.00---------
.............................................................................................................................................ACTGGCAAAAGGGTTTAG...........................................................................................18111.0011.00----------4.00------------------------2.00---------------------------1.002.00---1.00---------------------------1.00-----------------------------------------------------------------
.............................................................................................................................................ACTGGCAAAAGGGTTTAGAA.........................................................................................20111.0011.00-----------------------------------------1.00--3.002.00-3.00--------------------1.00-----------------------------------------------------------------1.00---------------------------
.............................................................................................................................................ACTGGCAAAAGGGTTTAGA..........................................................................................1919.009.00-2.00--------------------------------------2.00---------1.00------------2.00-----------------2.00--------------------------------------------------------------------------------
...........................................................................................................................................TCACTGGCAAAAGGGTTTAGAACT.......................................................................................2418.008.004.00--------------1.00--------1.00---------1.00---------------------------------------------------------1.00---------------------------------------------------------------------
..................................................................................................................................................CAAAAGGGTTTAGAACT.......................................................................................1715.005.00--5.00---------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................ACTGGCAAAAGGGTTTA............................................................................................1714.004.00----------1.00------------------------------------------------------------------------1.00------------1.00-------------------------------1.00---------------------------------
............................................................................................................................................CACTGGCAAAAGGGTTTAGA..........................................................................................2014.004.00-----------------------------------1.00-----------------------------------------------1.001.00------------------------------------------1.00----------------------------------
..............................................................................................................................................CTGGCAAAAGGGTTTAGAACTT......................................................................................2214.004.00--------1.00-----------------1.00----------------------------------------------------------------------1.00-------1.00--------------------------------------------------------
.............................................................................................................................................ACTGGCAAAAGGGTTTAGAAA........................................................................................2112.0011.00------1.00---------------------------------------------------------------------------------------1.00-------------------------------------------------------------------
.............................................................................................................................................ACTGGCAAAAGGGTTTAGAACTTT.....................................................................................2412.00161.00-----------------1.00--------------------1.00---------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................CTTCAACATTCCTCAAGTCACCCCAT...........2612.002.00-------------------------------------------------------------------------------2.00----------------------------------------------------------------------------------
...........................................................................................................................................TCACTGGCAAAAGGGTTTAGAACTT......................................................................................2512.002.00---------------------------------------------------1.00-----------------------------------------------------------------------------------------------------1.00--------
...............................................................................................................................................TGGCAAAAGGGTTTAGAACTTG.....................................................................................2211.001.00-------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................AAGTCACCCCATGCCCAGAAGTA2311.001.00--------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------
............................................................................................................................................CACTGGCAAAAGGGTTTAGAACTTT.....................................................................................2511.0017.00--------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------
...................................................................................................................................................................................................CATAGGTGGTCAGAAGATA....................................191.000.00----------------------------------------------------------------------------------------------------------------------------------------------------------1.00-------
...............................................................................................................................................TGGCAAAAGGGTTTAGAACTT......................................................................................2111.001.00-1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................TAAAGAGTTCTTCCTTTC..........................................................181.000.00---------------------------------------------------------------------------------------------------------------------1.00--------------------------------------------
...............................................................................................................................................TGGCAAAAGGGTTTAGAACTTGA....................................................................................2311.001.00---------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------
.....................................TATGTCAAGGGTTAAAGGAGG................................................................................................................................................................................................2111.001.00-----------------------------------------------------------1.00------------------------------------------------------------------------------------------------------
............................................................................................................................................CACTGGCAAAAGGGTTTAGAA.........................................................................................2111.001.00-----------------------------------1.00------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................CACTGGCAAAAGGGTTTAGAACA.......................................................................................2311.0012.00-----------------------------1.00------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TGGCAAAAGGGTTTAGAACTTGACTG.................................................................................2611.001.00-------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................AGTTCTTCCTCTGTGCCTCTG..................................................211.000.00------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------
............................................AGGGTTAAAGGAGGCTTTCACTTCCA....................................................................................................................................................................................2611.001.00--------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................GTCACCCCATGCCCACCA...181.000.00-----------------------------------------------------------------------------------------------------------------------------------------------1.00------------------
............................................................................................................................................CACTGGCAAAAGGGTTTAGAACTTA.....................................................................................2511.0017.00--------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................GGTTTAGAACTTGACCTA................................................................................181.000.00------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------
.....................................................................................................................................................................................TTCTTCCTCTGTGCCATAGT.................................................201.000.00------------------------------------------------------------------------------------------------------------------------------------------1.00-----------------------
.............................................................................................................................................ACTGGCAAAAGGGTTTAGAACTTG.....................................................................................2411.001.00---------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------
..............................................................................................................................................CTGGCAAAAGGGTTTAGTAGC.......................................................................................211.000.00---------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------
............................................................................................................................................CACTGGCAAAAGGGTTTAG...........................................................................................1911.001.00----------------------------------------------------------------------------------------------------------------1.00-------------------------------------------------
...................................................................................................................TTTGGAAATGATAGGATGC....................................................................................................................191.000.00------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------
............................................................................................................................................CACTGGCAAAAGGGTTTAGAACG.......................................................................................2311.0012.00------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------
...........................................................................CAGAAGTAAAATAAAATCA............................................................................................................................................................191.000.00--------------------------------------------------------------------------------------------------------------1.00---------------------------------------------------
.............................................................................................................................................ACTGGCAAAAGGGTTTAGAACTA......................................................................................2311.00123.00----------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................CACTGGCAAAAGGGTTTAGAACTTAT....................................................................................2611.0017.00--------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................CACTGGCAAAAGGGTTTA............................................................................................1811.001.00----------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------
...........................................................................................................................................TCACTGGCAAAAGGGTTTA............................................................................................1911.001.00----------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TGGCAAAAGGGTTTAGAACTTGACTGC................................................................................2711.001.00----------------------------------------------------------------------------------------------------------------------------1.00-------------------------------------
.............................................................................................................................................ACTGGCAAAAGGGTTTAGAACAAAC....................................................................................2511.0026.00--------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------
............................AAATGAGAATATGTCAAG............................................................................................................................................................................................................1820.500.50------------------------------------------------------------------------------------------------------0.50-----------------------------------------------------------
....................................................................................................................................................AAAGGGTTTAGAACTT......................................................................................1640.250.25-----0.25------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................AAAGGGTTTAGAACT.......................................................................................1580.120.12-----0.12------------------------------------------------------------------------------------------------------------------------------------------------------------

Antisense strand
TGGCCCCAGAATCCTTTCAGAAACCAAGAAATGAGAATATGTCAAGGGTTAAAGGAGGCTTTCACTTCCAGAAATCAGAAGTAAAATAAAGGCTTTTAGAGCCTGAAATTAGCTTTTTGGAAATGATAGGATTATAAAATCACTGGCAAAAGGGTTTAGAACTTGACTGCCCTATAAAGAGTTCTTCCTCTGTGCCATAGGTGGTCAGAATGGCTTCAACATTCCTCAAGTCACCCCATGCCCAGAAGTA
...............................................................................................................................................(((((...(((...(((((((..............))))))).)))...))))).....................................................
...........................................................................................................................................140.........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
TAX577739(Rovira)
total RNA. (breast)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577740(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191451(GSM715561)
177genomic small RNA (size selected RNA from . (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038859(GSM458542)
MM386. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR038858(GSM458541)
MEL202. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040011(GSM532896)
G529T. (cervix)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR189783SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR189784DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
TAX577580(Rovira)
total RNA. (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR191543(GSM715653)
124genomic small RNA (size selected RNA from . (breast)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)
SRR191506(GSM715616)
146genomic small RNA (size selected RNA from . (breast)
SRR191587(GSM715697)
50genomic small RNA (size selected RNA from t. (breast)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR040006(GSM532891)
G601N. (cervix)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR191515(GSM715625)
4genomic small RNA (size selected RNA from to. (breast)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR040029(GSM532914)
G026T. (cervix)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR038855(GSM458538)
D10. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR038860(GSM458543)
MM426. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
........................................................GGCTTTCACTTCCAGAAG................................................................................................................................................................................ 181.000.00------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------
...................GAAACCAAGAAATGAGAA..................................................................................................................................................................................................................... 1820.500.50-----------------------------------------------------------------------------------------------------------------------------------------------------------------0.50
...................................................................................................................................................................................AGTTCTTCCTCTGTGCCA..................................................... 1880.250.25----------------------------0.12--------------0.12----------------------------------------------------------------------------------------------------------------------