ID: uc002dzz.8
GENE: FBXL19(8)
chr16:30957851-30958100+


(1)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(3)
AGO2.ip 		(2)
AGO3.ip 		(3)
B-CELL 		(5)
BRAIN 		(13)
BREAST 		(41)
CELL-LINE 		(4)
CERVIX 		(5)
HEART 		(4)
HELA 		(4)
LIVER 		(3)
OTHER 		(1)
RRP40.ip 		(16)
SKIN 		(1)
TESTES 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
ATCATGGAAGGCCTCCGAGGAGGTGATGTGAGGAGTGGACAGATGAGGTCAGGCCATGAGGGTGTTTTTGAGAAGAGCAAGCCACAGAGTGCACCAGGTCACTCACTTATGTGGGAAGCAGGTGGAGGGCAGATGGTCTGGATACCTGGGCGCAGGGATGGGAGTGGCCAGGAGTGCTGACCTCTCATCTGGCTGCCCAGGGCAAACAGAGAGCCGTGGTCGGCTGCAGGGGGTGGCAGAACTGCGTCTG
................................................................................................................................................(((((((((..((((((((..((.(((.....))).)))))))))).)).))))))).................................................
.........................................................................................................................................138.................................................................206..........................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR189782DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR038859(GSM458542)
MM386. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189784DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		TAX577580(Rovira)
total RNA. (breast)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR037938(GSM510476)
293Red. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR038857(GSM458540)
D20. (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR343334SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR040035(GSM532920)
G001T. (cervix)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191561(GSM715671)
80genomic small RNA (size selected RNA from t. (breast)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		TAX577589(Rovira)
total RNA. (breast)		SRR191400(GSM715510)
37genomic small RNA (size selected RNA from t. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR040038(GSM532923)
G531N. (cervix)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		GSM359209(GSM359209)
hepg2_biotin_el_hl_a. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR191544(GSM715654)
126genomic small RNA (size selected RNA from . (breast)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR038855(GSM458538)
D10. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343335TAX577579(Rovira)
total RNA. (breast)		SRR040037(GSM532922)
G243T. (cervix)		SRR189787SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)		SRR038860(GSM458543)
MM426. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029125(GSM416754)
U2OS. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		TAX577739(Rovira)
total RNA. (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
....................................................................................................................................................................................CCTCTCATCTGGCTGCCCATTT................................................2214.000.0012.00--1.00----------------------------------------------------1.00--------------------------------------------------
..............................................................................................................................................TACCTGGGCGCAGGGATGGGAG......................................................................................22110.0010.005.00---1.00---1.00--------------1.00-------------------1.00---1.00-----------------------------------------------------------
...................................................................................................................................................................................ACCTCTCATCTGGCTGCCCAGT.................................................229.000.00---1.00------1.00--------------1.00---1.00---1.001.00-------------------------------------------------1.00-----1.00-1.00--------------
...................................................................................................................................................................................ACCTCTCATCTGGCTGCCCAGA.................................................228.000.00-----------------1.00-------------2.00-----2.00--------------------------1.00-----1.00---------------1.00--------------------
...............................................................................................................................................ACCTGGGCGCAGGGATGGGAG......................................................................................2118.008.00-3.00-1.00--------------------------------1.00----------------------1.00-------------------1.00---------1.00-----------------
..............................................................................................................................................TACCTGGGCGCAGGGATGGGAGA.....................................................................................2317.0010.002.00---1.00----1.00----2.00-----1.00--------------------------------------------------------------------------------------
..............................................................................................................................................TACCTGGGCGCAGGGATGGG........................................................................................2017.007.00--6.00----------------------------------------------------------------------------------1.00---------------------
....................................................................................................................................................................................CCTCTCATCTGGCTGCCCAGACT...............................................236.000.002.00-------------------------------------1.001.00--------------------------------------1.00---------------------1.00------
...............................................................................................................................................ACCTGGGCGCAGGGATGGGAGT.....................................................................................2216.006.002.00-----1.00--1.00-2.00-----------------------------------------------------------------------------------------------
....................................................................................................................................................................................CCTCTCATCTGGCTGCCCATT.................................................215.000.001.00--1.00-------------1.00---2.00-------------------------------------------------------------------------------------
................................................................................................................................................CCTGGGCGCAGGGATGGGAGTGGCC.................................................................................2514.004.00-2.00--------------------1.00-----1.00------------------------------------------------------------------------------
................................................................................................................................................CCTGGGCGCAGGGATGGGAGTGGC..................................................................................2413.003.00----1.00-----1.00----------------------------------------------------------------1.00-------------------------------
...............................................................................................................................................ACCTGGGCGCAGGGATGGGAGTGGCC.................................................................................2613.003.00----------------------------------------1.00---------------------1.00--------------------------------------1.00-----
................................................................................................................................................CCTGGGCGCAGGGATGGGAGTGG...................................................................................2313.003.00------2.00-------------------------------------1.00--------------------------------------------------------------
................................................................................................................................................CCTGGGCGCAGGGATGGGAGT.....................................................................................2113.003.00-----1.00----------------------------------------------------1.00-----------------------1.00------------------------
...............................................................................................................................................ACCTGGGCGCAGGGATGGGA.......................................................................................2013.003.00----------1.00---------------1.00------------------------------------------------------1.00-------------------------
...............................................................................................................................................ACCTGGGCGCAGGGATGGGAGTA....................................................................................2313.006.00------------------2.00---------------------------------------------------------1.00------------------------------
..................................................................................................................................................TGGGCGCAGGGATGGGAGTGG...................................................................................2113.003.00-----1.00---------1.00---1.00---------------------------------------------------------------------------------------
....................................................................................................................................................................................CCTCTCATCTGGCTGCCCAGA.................................................213.000.001.00------------------------------------------------------------------1.00-1.00-------------------------------------
.............................................................................................................TGTGGGAAGCAGGTGGAGGGCAGACGG..................................................................................................................272.000.00-------2.00---------------------------------------------------------------------------------------------------
..................................................................................................................................................TGGGCGCAGGGATGGGAGTGGC..................................................................................2212.002.00--------2.00--------------------------------------------------------------------------------------------------
..............................................................................................................................................TACCTGGGCGCAGGGATGGGAGT.....................................................................................2312.002.001.00-------------------1.00--------------------------------------------------------------------------------------
..............................................................................................................................................TACCTGGGCGCAGGGATGGGA.......................................................................................2112.002.00------------------------------------------------------------1.00-------------------------------------1.00--------
................................................................................................................................................CCTGGGCGCAGGGATGG.........................................................................................1712.002.00-------------------------------------------------1.00----1.00----------------------------------------------------
..............................................................................................................................................TACCTGGGCGCAGGGATGGGAA......................................................................................2212.002.00-----------------------------------------1.00------------------------------------------------------------1.00----
.................................................................................................................................................CTGGGCGCAGGGATGGGAGTGGCCT................................................................................2512.002.00----1.00----------------------------------------------------1.00-------------------------------------------------
................................................................................................................................................CCTGGGCGCAGGGATGGGAGTGTAA.................................................................................252.000.00-2.00---------------------------------------------------------------------------------------------------------
.................................................................................................................................................CTGGGCGCAGGGATGGGAGTGGCTAT...............................................................................2612.001.00----------------2.00------------------------------------------------------------------------------------------
....................................................................................................................................................................................CCTCTCATCTGGCTGCCCAGTTT...............................................232.000.00-------------------------1.00----1.00----------------------------------------------------------------------------
.................................................................................................................................................CTGGGCGCAGGGATGGGAGTGGCC.................................................................................2412.002.00----1.00-----------1.00------------------------------------------------------------------------------------------
....................................................................................................................................................................................CCTCTCATCTGGCTGCCCAGAAA...............................................232.000.00----1.00----1.00-------------------------------------------------------------------------------------------------
...............................................................................................................................................ACCTGGGCGCAGGGATGGGAGTGG...................................................................................2412.002.00-----------------1.00----------1.00------------------------------------------------------------------------------
.................................................................................................................................................CTGGGCGCAGGGATGGGAAA.....................................................................................202.000.00---------------2.00-------------------------------------------------------------------------------------------
...............................................................................................................................................ACCTGGGCGCAGGGATGGGAGTAT...................................................................................2412.006.00-----1.00------------------------------------------------------------------------------------------1.00----------
...............................................................................................................................................ACCTGGGCGCAGGGATGGT........................................................................................1912.002.00--2.00--------------------------------------------------------------------------------------------------------
...............................................................................................................................................ACCTGGGCGCAGGGATGG.........................................................................................1812.002.00--------------------------------2.00--------------------------------------------------------------------------
................................................................................................................................................CCTGGGCGCAGGGATGGGAGTGGA..................................................................................2412.003.00-----------------------------------2.00-----------------------------------------------------------------------
.................................................................................................................................................CTGGGCGCAGGGATGGGAGTGA...................................................................................2212.001.00-----1.00------------------1.00----------------------------------------------------------------------------------
..................................................................................................................................................TGGGCGCAGGGATGGGAGTG....................................................................................2011.001.00----------------------------------------------------------------------------------------------1.00------------
................................................................................................................................................CCTGGGCGCAGGGATGGGA.......................................................................................1911.001.00------1.00----------------------------------------------------------------------------------------------------
....................................................................................................................................................................................CCTCTCATCTGGCTGCCCAGAA................................................221.000.00----------------------------------------------------1.00------------------------------------------------------
................................................................................................................................................CCTGGGCGCAGGGATGGGAGA.....................................................................................2111.001.00--------------------------------------------------------------------------1.00--------------------------------
...........................................................................................................TATGTGGGAAGCAGGTGGAGGGCAG......................................................................................................................2511.001.00-----------------------------1.00-----------------------------------------------------------------------------
.................................................................................................................................................................................................................................GCAGGGGGTGGCAGAACT.......1811.001.00------------------------------------------------1.00----------------------------------------------------------
....................................................................................................................................................................................CCTCTCATCTGGCTGCCCATTA................................................221.000.00-----------1.00-----------------------------------------------------------------------------------------------
..................................................................................................................................................TGGGCGCAGGGATGGGAGTGGCCAC...............................................................................251.000.00------------1.00----------------------------------------------------------------------------------------------
..............................................................................................................................................TACCTGGGCGCAGGGATGGGAAA.....................................................................................2311.002.00-----------------------------------------------------------------------1.00-----------------------------------
..............................................................................................................................................TACCTGGGCGCAGGGATGGGAC......................................................................................2211.002.00-----------------------1.00-----------------------------------------------------------------------------------
...................................................................................................................................................................................ACCTCTCATCTGGCTGCCCAGTT................................................231.000.00-------------------------------------------------------1.00---------------------------------------------------
...............................................................................................................................................ACCTGGGCGCAGGGATGGGAGTGGCCT................................................................................2711.003.00-1.00---------------------------------------------------------------------------------------------------------
...............................................................................................................................................ACCTGGGCGCAGGGATGGGATAG....................................................................................2311.003.00--------------------------1.00--------------------------------------------------------------------------------
...............................................................................................................................................ACCTGGGCGCAGGGATGGGAGTGTA..................................................................................2511.001.00------------------------------------------------------------------1.00----------------------------------------
................................................................................................................................................CCTGGGCGCAGGGATGGGAGTGGCAA................................................................................2611.003.00------------------------1.00----------------------------------------------------------------------------------
................................................................................................................................................CCTGGGCGCAGGGATGGGAGTGGCA.................................................................................2511.003.00------1.00----------------------------------------------------------------------------------------------------
......................................................................................................................................................................................TCTCATCTGGCTGCCCAGAAGA..............................................221.000.00---------------------------------------------------1.00-------------------------------------------------------
.....................................................................................................................................................................................................................CCGTGGTCGGCTGCAGGGGGG................211.000.00-------------------------------------------------------------------------------------------------1.00---------
....................................................................................................................................................................................CCTCTCATCTGGCTGCCCAT..................................................201.000.00---------------------------------1.00-------------------------------------------------------------------------
......................................................................................................................................................................................TCTCATCTGGCTGCCCAGTTCT..............................................221.000.00-------------------------------------------------------------------------------------------1.00---------------
...............................................................................................................................................ACCTGGGCGCAGGGATGGGAGTAA...................................................................................2411.006.00-------------1.00---------------------------------------------------------------------------------------------
.................................................................................................................................................CTGGGCGCAGGGATGGGAGTGGCCCTTC.............................................................................2811.002.00------------1.00----------------------------------------------------------------------------------------------
......................................................................................................................................................................................................AGGGCAAACAGAGAGATA..................................181.000.00---------------------------------------------1.00-------------------------------------------------------------
..............................................................................................................................................TACCTGGGCGCAGGGATGGGGGA.....................................................................................2311.007.00--------------1.00--------------------------------------------------------------------------------------------
.................................................................................................................................................CTGGGCGCAGGGATGGGAGTG....................................................................................2111.001.00---------------------------------------------------------------------------------------1.00-------------------
..............................................................................................................................................TACCTGGGCGCAGGGATGG.........................................................................................1911.001.00------------------------------1.00----------------------------------------------------------------------------
.............................................................................................................TGTGGGAAGCAGGTGGAGAGG........................................................................................................................211.000.00---------------------------1.00-------------------------------------------------------------------------------
...............................................................................................................................................ACCTGGGCGCAGGGATGGGAGTAAT..................................................................................2511.006.00-------------1.00---------------------------------------------------------------------------------------------
................................................................................................................................................CCTGGGCGCAGGGATGGGAGTGGCCTTTT.............................................................................2911.004.00---1.00-------------------------------------------------------------------------------------------------------
........................................AGATGAGGTCAGGCCATGAGGGCGT.........................................................................................................................................................................................251.000.00-------1.00---------------------------------------------------------------------------------------------------
.................................................................................................................................................CTGGGCGCAGGGATGGGAGT.....................................................................................2011.001.00-----------------------------------------------------------------------------1.00-----------------------------
................................................................................................................GGGAAGCAGGTGGAGTTA........................................................................................................................181.000.00--------------------------------------------------1.00--------------------------------------------------------
...............................................................................................................................................ACCTGGGCGCAGGGATGGGAGTG....................................................................................2311.001.00---------------------------------------------------------------------------------------------------1.00-------
..............................................................................................................................................TACCTGGGCGCAGGGATGGGAAAG....................................................................................2411.002.00------1.00----------------------------------------------------------------------------------------------------
................................................................................................................................................CCTGGGCGCAGGGATGGG........................................................................................1811.001.00--------------------------------------------------------------------------------1.00--------------------------
...............................................................................................................................................ACCTGGGCGCAGGGATGGGAGTGGC..................................................................................2511.001.00------------------1.00----------------------------------------------------------------------------------------
...............................................................................................................................................ACCTGGGCGCAGGGATGGGAGTGGCCAGGAGTG..........................................................................3311.001.00------------------------------------------------------------------------1.00----------------------------------
....................................................................................................................................ATGGTCTGGATACCTGGGCGCAGGGACGGG........................................................................................301.000.00-------1.00---------------------------------------------------------------------------------------------------
....................................................................................................................................................................................CCTCTCATCTGGCTGCCCAGT.................................................211.000.00-------------------------------------------------------------1.00---------------------------------------------
................................................................................................................................................CCTGGGCGCAGGGATGGGAGTGGCCA................................................................................2611.001.00---------1.00-------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................AGGGCAAACAGAGAGCCG..................................1811.001.00-------------1.00---------------------------------------------------------------------------------------------
.................................................................................................................................................CTGGGCGCAGGGATGGGAG......................................................................................1911.001.00----------1.00------------------------------------------------------------------------------------------------
................................................................TTTTTGAGAAGAGCAAGCCACAG...................................................................................................................................................................2311.001.00-----------------------------------------------------------------------------------------------1.00-----------
....................................................................................................................................................................................................CCAGGGCAAACAGAGAGCCG..................................2011.001.00---------------------------------------------------------------------------------------------1.00-------------
..................................................................................................................................................TGGGCGCAGGGATGGGAGTGGCC.................................................................................2311.001.00-------------------1.00---------------------------------------------------------------------------------------
..................................................................................................................................................TGGGCGCAGGGATGGGAGTGGCCT................................................................................2411.001.00-----------------------------------------------------1.00-----------------------------------------------------
................................................................................................................................................CCTGGGCGCAGGGATGGGAG......................................................................................2011.001.00-----1.00-----------------------------------------------------------------------------------------------------
................GAGGAGGTGATGTGAGTGG.......................................................................................................................................................................................................................191.000.00-----------------------------------------------------------------1.00-----------------------------------------
.................................................................................................................................................CTGGGCGCAGGGATGGGAGTGGC..................................................................................2311.001.00-----------------------------------------------------------------------------------1.00-----------------------
....................................................................................................................................................................................CCTCTCATCTGGCTGCCCAAGA................................................221.000.00--------1.00--------------------------------------------------------------------------------------------------
.......................................................................................................................................GTCTGGATACCTGGGCG..................................................................................................1711.001.00-----------1.00-----------------------------------------------------------------------------------------------
....................................................................................................................................................................................CCTCTCATCTGGCTGCCCAGAGA...............................................231.000.00-----1.00-----------------------------------------------------------------------------------------------------
.................................................................................................................................................CTGGGCGCAGGGATGGGAGTGGCAT................................................................................2511.001.00---1.00-------------------------------------------------------------------------------------------------------
..............................................................................................................................................TACCTGGGCGCAGGGATGGGAT......................................................................................2211.002.00--------------------------------------------------------------------1.00--------------------------------------
...............................................................................................................................................ACCTGGGCGCAGGGATGGGAGTGGT..................................................................................2511.002.00----------------------1.00------------------------------------------------------------------------------------
.................................................................................................................................................CTGGGCGCAGGGATGGGAGTGG...................................................................................2211.001.00----------------------------------------------1.00------------------------------------------------------------
..............................................................................................................................................TACCTGGGCGCAGGGATGGGAGAC....................................................................................2411.0010.00------------1.00----------------------------------------------------------------------------------------------
................................................................................................................................................CCTGGGCGCAGGGATGGGAGTGGCT.................................................................................2511.003.00------------------------------------1.00----------------------------------------------------------------------
....................................................................................................................................................................................CCTCTCATCTGGCTGCCCAAAT................................................221.000.00----------------------------------1.00------------------------------------------------------------------------
..............................................................................................................................................TACCTGGGCGCAGGGATGGGAGTG....................................................................................2411.001.00-------------------------------------------------------------------------1.00---------------------------------
............................................................................................................................................................................................................AACAGAGAGCCGTGG...............................1530.670.67-------0.33-------------------------------------------------------------------------------------------------0.33-
..................................................................................................................................................................................................................................CAGGGGGTGGCAGAACT.......1720.500.50--------------------------------------------------------------------------------------------------------0.50--
........................................................................................................................................TCTGGATACCTGGGCGC.................................................................................................1720.500.50-------------------------------------------------------------------------------------------------------0.50---
....................................................................................................................................................................................................................................GGGGGTGGCAGAACT.......1550.200.20--------------------------------------0.20--------------------------------------------------------------------
.................................................................................................................GGAAGCAGGTGGAGGGC........................................................................................................................1750.200.20---------------------------------------0.20-------------------------------------------------------------------
.......................................................................................................................AGGTGGAGGGCAGATG...................................................................................................................1650.200.20----------------------------------------------------------------------------------------------------------0.20
...................................................................................................................................................................................................................................AGGGGGTGGCAGAAC........15100.100.10---------------------------------------------------------------------------------------------------------0.10-

Antisense strand
ATCATGGAAGGCCTCCGAGGAGGTGATGTGAGGAGTGGACAGATGAGGTCAGGCCATGAGGGTGTTTTTGAGAAGAGCAAGCCACAGAGTGCACCAGGTCACTCACTTATGTGGGAAGCAGGTGGAGGGCAGATGGTCTGGATACCTGGGCGCAGGGATGGGAGTGGCCAGGAGTGCTGACCTCTCATCTGGCTGCCCAGGGCAAACAGAGAGCCGTGGTCGGCTGCAGGGGGTGGCAGAACTGCGTCTG
................................................................................................................................................(((((((((..((((((((..((.(((.....))).)))))))))).)).))))))).................................................
.........................................................................................................................................138.................................................................206..........................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR189782DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR038859(GSM458542)
MM386. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189784DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		TAX577580(Rovira)
total RNA. (breast)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR037938(GSM510476)
293Red. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR038857(GSM458540)
D20. (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR343334SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR040035(GSM532920)
G001T. (cervix)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191561(GSM715671)
80genomic small RNA (size selected RNA from t. (breast)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		TAX577589(Rovira)
total RNA. (breast)		SRR191400(GSM715510)
37genomic small RNA (size selected RNA from t. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR040038(GSM532923)
G531N. (cervix)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		GSM359209(GSM359209)
hepg2_biotin_el_hl_a. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR191544(GSM715654)
126genomic small RNA (size selected RNA from . (breast)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR038855(GSM458538)
D10. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343335TAX577579(Rovira)
total RNA. (breast)		SRR040037(GSM532922)
G243T. (cervix)		SRR189787SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)		SRR038860(GSM458543)
MM426. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029125(GSM416754)
U2OS. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		TAX577739(Rovira)
total RNA. (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.....................GGTGATGTGAGGAGTGGA................................................................................................................................................................................................................... 1812.002.00------------------------------------------1.00---------------------------------------------1.00------------------
..........................................................................................................................................TGGATACCTGGGCGCAGGGA............................................................................................ 2011.001.00---1.00-------------------------------------------------------------------------------------------------------
.....................GGTGATGTGAGGAGTGGACAGA............................................................................................................................................................................................................... 2211.001.00---------------------------------------------------------------1.00-------------------------------------------
................................................................TTTTTGAGAAGAGCAGAG........................................................................................................................................................................ 181.000.00---------------------------1.00-------------------------------------------------------------------------------
......................................................................................................................................................................................................................CGTGGTCGGCTGC....................... 13100.100.10-------0.10---------------------------------------------------------------------------------------------------