ID: uc001ubi.4
GENE: SETD1B(4)
chr12:122251812-122252061+


(1)
AGO1.ip 		(2)
AGO2.ip 		(1)
AGO3.ip 		(6)
B-CELL 		(8)
BRAIN 		(7)
BREAST 		(15)
CELL-LINE 		(1)
CERVIX 		(2)
HEART 		(4)
HELA 		(1)
LIVER 		(3)
OTHER 		(12)
SKIN 		(1)
XRN.ip

Sense strand
GAATTCTAGTGGTAACTCCATGAGGCAGGGACTATGATGCCCATTTTGCAAATGAAGACGCTGAGGCTTGGAGAGGCTGAATGGCTTGCACTGGGTCACACAGCTGGGAGTGCCACTGATTGCTAGTCTTGCAGAGGGGACTCCGAGAGCCCCTTGGCCTTCCAGACTCACCTCACTGTCTCTCCCTGCTCTCTCTGCAGGGCCAGCAGTCCTCAGGCGAGGACATGGAGATCTCGGATGACGAGATGCC
.................................................................................................................................((((((((((.....(((.(((....))))))..((((..........))))........))))))))))...................................................
............................................................................................................................125........................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		TAX577740(Rovira)
total RNA. (breast)		SRR029125(GSM416754)
U2OS. (cell line)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR038861(GSM458544)
MM466. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR189787GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038859(GSM458542)
MM386. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577739(Rovira)
total RNA. (breast)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577738(Rovira)
total RNA. (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029126(GSM416755)
143B. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR189784SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189782GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040035(GSM532920)
G001T. (cervix)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
.................................................................................................................................TGCAGAGGGGACTCCGAGAGC....................................................................................................21131.0031.0011.005.00---4.00-3.00-1.00-1.00---------------------1.00----1.00------1.00-------1.00-1.001.00-----
.................................................................................................................................TGCAGAGGGGACTCCGAGAGCC...................................................................................................22111.0011.007.00--------1.002.00--------------------------------1.00------------------
.................................................................................................................................TGCAGAGGGGACTCCGAGAGTAA..................................................................................................2318.003.00--8.00-----------------------------------------------------------
.................................................................................................................................TGCAGAGGGGACTCCGAGAGCCA..................................................................................................2318.0011.005.001.00----------------------1.00---1.00---------------------------------
...................................................................................................................................................................................CTCTCCCTGCTCTCTCTGCAGA.................................................226.000.006.00-------------------------------------------------------------
................................................................................................................................TTGCAGAGGGGACTCCGAGAGC....................................................................................................2216.006.00----5.00------1.00--------------------------------------------------
.................................................................................................................................TGCAGAGGGGACTCCGAGAGCA...................................................................................................2214.0031.00------------1.00--------1.00---1.00--------------------------1.00---------
...................................................................................................................................................................................CTCTCCCTGCTCTCTCTGCAGT.................................................224.000.00-------------2.00------------------------------1.00------1.00----------
.......AGTGGTAACTCCATGAGGCAGGGACT.........................................................................................................................................................................................................................2613.003.00---3.00----------------------------------------------------------
.....................................................................................................................................................................................................................CAGGCGAGGACATGGAGATCTCT..............233.000.00-3.00------------------------------------------------------------
.................................................................................................................................TGCAGAGGGGACTCCGAGAG.....................................................................................................2013.003.00------------------------------------1.001.00----------1.00-------------
................................................................................................................................TTGCAGAGGGGACTCCGAGAG.....................................................................................................2112.002.00------2.00-------------------------------------------------------
...........................................................................................................................................................................................................................AGGACATGGAGATCTCGGA............1912.002.00------------------1.00--------1.00----------------------------------
..................................................................................................................................GCAGAGGGGACTCCGAGAGC....................................................................................................2012.002.002.00-------------------------------------------------------------
...........................................................................................................................................................................................................................AGGACATGGAGATCTCGGATGACGAG.....2612.002.00--------1.00-----------------------------------------1.00-----------
.................................................................................................................................TGCAGAGGGGACTCCGAGAGA....................................................................................................2112.003.00------1.00-----------------------------------1.00-------------------
.............................................................................................................................................................................................................................GACATGGAGATCTCGGATGAC........2112.002.00---2.00----------------------------------------------------------
.......................................................................................................................................GGGGACTCCGAGAGCC...................................................................................................1621.501.501.50-------------------------------------------------------------
...............................................................................................................................................................................................................AGTCCTCAGGCGAGGACATGGAGATC.................2611.001.00-----------------------------------------------1.00--------------
.................................................................................................................................TGCAGAGGGGACTCCGAGAA.....................................................................................................2011.001.00---------------------------------------1.00----------------------
.................................................................................................................................TGCAGAGGGGACTCCGAGCGC....................................................................................................211.000.00--------------------------------1.00-----------------------------
......................................................................................................................................AGGGGACTCCGAGAGCC...................................................................................................1711.001.001.00-------------------------------------------------------------
............................................................................................................................................................................................................................GGACATGGAGATCTCGGA............1811.001.00-----------------1.00--------------------------------------------
.................................................................................................................................TGCAGAGGGGACTCCGAGA......................................................................................................1911.001.00-----------------------------------1.00--------------------------
....TCTAGTGGTAACTCCATAGGC.................................................................................................................................................................................................................................211.000.00--------------1.00-----------------------------------------------
..........................................................................................................................................................................................................................GAGGACATGGAGATCTCGGATGACGAG.....2711.001.00----------------1.00---------------------------------------------
............................................................................................................................................................................................................................GGACATGGAGATCTCGGATGACGAG.....2511.001.00---1.00----------------------------------------------------------
.................................................................GCTTGGAGAGGCTGAGCTG......................................................................................................................................................................191.000.00--------1.00-----------------------------------------------------
.....................................................................................................................................................................................................................CAGGCGAGGACATGGAGATCTCGGA............2511.001.00-------------------------------------------------1.00------------
..................................................................................................................................................................................TCTCTCCCTGCTCTCTCTGCAGT.................................................231.000.00----------1.00---------------------------------------------------
......................................................................................................................................................................................................................AGGCGAGGACATGGAGATCTCGGA............2411.001.00---1.00----------------------------------------------------------
................................................................................................................................................................................................................................ATGGAGATCTCGGATGAC........1811.001.00----------------------1.00---------------------------------------
................................................................................................................................................................................................................GTCCTCAGGCGAGGACATGGAGATCT................2611.001.00--------1.00-----------------------------------------------------
.................................................................................................................................TGCAGAGGGGACTCCGAGAGCCT..................................................................................................2311.0011.00------------1.00-------------------------------------------------
.................................................................................................................................................................................................................................TGGAGATCTCGGATGACG.......1811.001.00----------------------------------1.00---------------------------
................................................................................................................................................................................................................GTCCTCAGGCGAGGACATGGAG....................2211.001.00-------------------1.00------------------------------------------
................................................CAAATGAAGACGCTGAGGCTTG....................................................................................................................................................................................2211.001.00------------------------------1.00-------------------------------
................................................................................................................................TTGCAGAGGGGACTCCGAGAGCC...................................................................................................2311.001.00--------------------------1.00-----------------------------------
............................................................................................................................................................................................................AGCAGTCCTCAGGCGAGGACATGGAGATC.................2911.001.00---------1.00----------------------------------------------------
.................................................................................................................................TGCAGAGGGGACTCCGAGAGCCAA.................................................................................................2411.0011.00---------------1.00----------------------------------------------
...................................................................TTGGAGAGGCTGAATATTG....................................................................................................................................................................191.000.00----------------------------------------------1.00---------------
..........................................................................................................................................................................CCTCACTGTCTCTCCCTGCTCTCTCTCTCT..................................................301.000.00-----------------1.00--------------------------------------------
................................................................................................................................................................................................................................ATGGAGATCTCGGATGACGA......2011.001.00----------------1.00---------------------------------------------
................................................................................................................................TTGCAGAGGGGACTCCGAGA......................................................................................................2011.001.00-----------------------1.00--------------------------------------
.................................................................................................................................TGCAGAGGGGACTCCGAGAGAAAC.................................................................................................2411.003.00---------------1.00----------------------------------------------
...............................................................................................................................................................................................................................CATGGAGATCTCGGATGAA........191.000.00-----------------------------------------1.00--------------------
...............................................................................................................................................................................................................AGTCCTCAGGCGAGGACATGGAG....................2311.001.00----------------------------------------1.00---------------------
..................................................................................................................................................................................................................................GGAGATCTCGGATGA.........1520.500.50---------------------------------------------------------0.50----
..................................................................................................................................................................................................................................GGAGATCTCGGATGAC........1620.500.50----------------------------------------------------------0.50---
.....................................................................................................................................................................................................................CAGGCGAGGACATGGAG....................1720.500.50------------------0.50-------------------------------------------
.....................................................................................................................................................................................................................CAGGCGAGGACATGGA.....................1630.330.33-------------------0.33------------------------------------------
..........................................................................................................................................................................................................................GAGGACATGGAGATC.................15100.100.10-------------------------------------------------------------0.10

Antisense strand
GAATTCTAGTGGTAACTCCATGAGGCAGGGACTATGATGCCCATTTTGCAAATGAAGACGCTGAGGCTTGGAGAGGCTGAATGGCTTGCACTGGGTCACACAGCTGGGAGTGCCACTGATTGCTAGTCTTGCAGAGGGGACTCCGAGAGCCCCTTGGCCTTCCAGACTCACCTCACTGTCTCTCCCTGCTCTCTCTGCAGGGCCAGCAGTCCTCAGGCGAGGACATGGAGATCTCGGATGACGAGATGCC
.................................................................................................................................((((((((((.....(((.(((....))))))..((((..........))))........))))))))))...................................................
............................................................................................................................125........................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		TAX577740(Rovira)
total RNA. (breast)		SRR029125(GSM416754)
U2OS. (cell line)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR038861(GSM458544)
MM466. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR189787GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038859(GSM458542)
MM386. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577739(Rovira)
total RNA. (breast)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577738(Rovira)
total RNA. (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029126(GSM416755)
143B. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR189784SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189782GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040035(GSM532920)
G001T. (cervix)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
......................................................................................................................ATTGCTAGTCTTGCATTAG................................................................................................................. 191.000.00--------------1.00-----------------------------------------------
............TAACTCCATGAGGCATGG............................................................................................................................................................................................................................ 181.000.00------------------------------------------------------1.00-------
...........................................................................................................................................................................................................................AGGACATGGAGATCTCGGATGACGAG..... 2611.001.00-----------------------------1.00--------------------------------
.........................................................................................................................................................................................................GCCAGCAGTCCTCAGGTCTG............................. 201.000.00--------------------1.00-----------------------------------------
........................................................................................................................................................CTTGGCCTTCCAGACCGGC............................................................................... 191.000.00-------------------------------1.00------------------------------
.......................................................................................................................................................CCTTGGCCTTCCAGAC................................................................................... 1650.200.20------------------------------------------------------------0.20-
.......................................................................................................................................................CCTTGGCCTTCCAGACTG................................................................................. 180.200.00-----------------------------------------------------------0.20--