ID: uc001qnt.0
GENE: TNFRSF1A
chr12:6438739-6438993-


(1)
AGO1.ip 		(5)
AGO2.ip 		(1)
AGO3.ip 		(3)
B-CELL 		(27)
BREAST 		(31)
CELL-LINE 		(4)
CERVIX 		(4)
FIBROBLAST 		(8)
HEART 		(4)
HELA 		(11)
LIVER 		(1)
OTHER 		(56)
SKIN 		(3)
UTERUS 		(1)
XRN.ip

Sense strand
CCCCCTTCAGAAGTGGGAGGACAGCGCCCACAAGCCACAGAGCCTAGACAGTGAGTTTCTCCCGCGGCTGGAGACGAGGAGGCTGGGGGAGGGCCGGGGGAGCGCGGGAGGCGCTCCCAGAGGGGACCACGAGAGGCGGAGGGCGCGGGATGCGGGGCGGGGCCTGGGGTTGCCGCCCGAGGCTCACCGGCCCGCGTCCCCGCAGCTGATGACCCCGCGACGCTGTACGCCGTGGTGGAGAACGTGCCCCCGTTG
................................................................................................................................................((((((((((((.((((((((.((((....)))).)))))..))).)))))))))).))....................................................
................................................................................................................................................145.........................................................205................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR189783SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577746(Rovira)
total RNA. (breast)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029127(GSM416756)
A549. (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		TAX577740(Rovira)
total RNA. (breast)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR038863(GSM458546)
MM603. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR029124(GSM416753)
HeLa. (hela)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		GSM532876(GSM532876)
G547T. (cervix)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)		SRR040028(GSM532913)
G026N. (cervix)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189786SRR040032(GSM532917)
G603N. (cervix)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		TAX577741(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532884(GSM532884)
G871T. (cervix)		SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)		SRR038854(GSM458537)
MM653. (cell line)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		TAX577580(Rovira)
total RNA. (breast)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029131(GSM416760)
MCF7. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577453(Rovira)
total RNA. (breast)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191536(GSM715646)
183genomic small RNA (size selected RNA from . (breast)		SRR191458(GSM715568)
28genomic small RNA (size selected RNA from t. (breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR191460(GSM715570)
33genomic small RNA (size selected RNA from t. (breast)		SRR191456(GSM715566)
182genomic small RNA (size selected RNA from . (breast)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029126(GSM416755)
143B. (cell line)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189782DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038855(GSM458538)
D10. (cell line)		SRR191573(GSM715683)
68genomic small RNA (size selected RNA from t. (breast)		SRR029130(GSM416759)
DLD2. (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR191635(GSM715745)
9genomic small RNA (size selected RNA from to. (breast)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
......................................................................................................................................................................................CTCACCGGCCCGCGTCCCCGCAGT.................................................24184.0025.0015.00-1.00--1.003.004.002.003.00--3.002.001.00----3.001.002.00-1.00-1.002.001.001.00-1.00--2.00-----1.001.00------1.00-1.00--1.00-1.00-1.00----1.00--2.00------1.00--1.001.00--------1.00-1.001.00----1.00------------1.00--1.00---1.00---1.001.001.001.001.001.00---1.00-1.001.00------1.001.00-----1.00------1.00-1.00---
......................................................................................................................................................................................CTCACCGGCCCGCGTCCCCGCAGA.................................................24130.0025.00--2.00--1.001.00-------1.002.001.00--------1.00-1.00-1.00-1.00---2.00--1.00--1.00-1.00-------1.00-1.00-----1.00-------1.00-----------------------------------------------1.00-------1.00--1.00-----1.00-1.00--1.00-1.00----1.00-1.00--------
......................................................................................................................................................................................CTCACCGGCCCGCGTCCCCGCAG..................................................23125.0025.002.00--1.00-1.00--1.00----2.00--------------1.001.00----2.00-----1.00------1.001.00------1.00----2.00--1.00----------------------------------------1.00-----1.001.00-1.001.00-------------------------1.00------1.00-------
......................................................................................................................................................................................CTCACCGGCCCGCGTCCCCGCA...................................................22117.0017.002.00---1.001.001.00-1.00-1.00---------1.001.00--2.00-----1.00------------------------1.00------------------------1.00----------1.00---------------------------------------------------1.00------1.00----
......................................................................................................................................................................................CTCACCGGCCCGCGTCCCCGCAT..................................................23111.0017.00--1.00---1.00--1.00------------------1.00-1.00-1.00-----1.00---------------------------1.00---------1.00--1.00--1.00------------------------------------------------------------------------
......................................................................................................................................................................................CTCACCGGCCCGCGTCCCCGC....................................................2119.009.00--------------1.00-------2.00----------------------1.00------1.00----------------1.00--1.00---------------1.00--------------------1.00---------------------------------------------
......................................................................................................................................................................................CTCACCGGCCCGCGTCCCCGCAA..................................................2317.0017.00--------------------1.00---1.00-1.00------------------------1.00---------1.00--------------------------------1.00---1.00--------------------------------------------------------
......................................................................................................................................................................................CTCACCGGCCCGCGTCCCCGCAAT.................................................2416.0017.00---1.00--------------------------------------1.00----------------------1.001.00---------------------------------------1.00----------------------1.00-------------------------
......................................................................................................................................................................................CTCACCGGCCCGCGTCCCCGCAGTT................................................2515.0025.00--1.00--------------------------1.00--------------------1.00-----------1.001.00-------------------------------------------------------------------------------------------
.......................................................................................................................................................................................TCACCGGCCCGCGTCCCCGCAGT.................................................2315.003.002.00----------------------2.00-------1.00---------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................CTCACCGGCCCGCGTCCCCGCAGTATC..............................................2714.0025.00-----------------4.00-----------------------------------------------------------------------------------------------------------------------------------------
.........GAAGTGGGAGGACAGCGCC...................................................................................................................................................................................................................................1914.004.00-4.00---------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................CTCACCGGCCCGCGTCCCCGCAGC.................................................2414.004.00-------------------------1.00------------------1.00-----1.00---------------------------------------------1.00----------------------------------------------------------
.....................................................................................................................................................ATGCGGGGCGGGGCCTGGGGTTGC..................................................................................2414.004.003.00---------------1.00------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................GAGGGCCGGGGGAGCGCG.....................................................................................................................................................1813.003.00----3.00------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................TCACCGGCCCGCGTCCCCGCAG..................................................2213.003.00--------------1.00-----------------1.00---------------1.00----------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................CTCACCGGCCCGCGTCCCCG.....................................................2013.003.00-------1.00--1.00----------------------------------------------------------------------1.00-------------------------------------------------------------------------
......................................................................................................................................................................................CTCACCGGCCCGCGTCCCCGCAGAT................................................2512.0025.00--1.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................ATGCGGGGCGGGGCCTGGGGTTG...................................................................................2312.002.001.00--------------------------------------1.00-------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................CTCACCGGCCCGCGTCCCCGCAC..................................................2312.0017.001.00------------------------------------------------1.00---------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................CTCACCGGCCCGCGTCCCCGCAGTTT...............................................2612.0025.00----------1.00-----------------------------------------------------------------------------------------1.00------------------------------------------------------
......................................................................................................................................................................................CTCACCGGCCCGCGTCCCC......................................................1912.002.00------------1.00------------------------------------------------------------------------------------------------------------------------------------1.00---------
......................................................................................................................................................................................CTCACCGGCCCGCGTCCCCGCCGT.................................................2412.009.00---------------1.00---------------------------------------------------------------------------------1.00---------------------------------------------------------
......................................................................................................................................................................................CTCACCGGCCCGCGTCCCCGCAAGA................................................2512.0017.00----------------------------------------------1.00-------1.00----------------------------------------------------------------------------------------------------
...............................................................................................GGGGGAGCGCGGGAGGCCCGG...........................................................................................................................................212.000.00------------------1.00-----------------1.00----------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................CTCACCGGCCCGCGTCCCCGCT...................................................2212.009.00----------1.00--------------------------1.00---------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................CTCACCGGCCCGCGTCCCCGGT...................................................2212.003.00----------------------------------------------------------2.00------------------------------------------------------------------------------------------------
.....................................................................................................................................................ATGCGGGGCGGGGCCTGGGGTT....................................................................................2212.002.002.00----------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................CTCACCGGCCCGCGTCCCCGCAGAAG...............................................2611.0025.00-------------------------------------------------------------------------------------1.00---------------------------------------------------------------------
......................................................................................................................................................................................CTCACCGGCCCGCGTCCCCGCAGTAT...............................................2611.0025.00------------------------------------------------------------------------------------------------------------------------------------------1.00----------------
........AGAAGTGGGAGGACAGCGC....................................................................................................................................................................................................................................1911.001.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................AGGCTCACCGGCCCGCGTCCCCGC....................................................2411.001.00-----1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................CTCACCGGCCCGCGTCCCCGCAGG.................................................2411.0025.00-----------------------------------------------------------------------------------1.00-----------------------------------------------------------------------
......................................................................................................................................................................................CTCACCGGCCCGCGTCCCCAAT...................................................2211.002.00---------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................ATGCGGGGCGGGGCCTGT........................................................................................181.000.00------------------------------------------1.00----------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................ACCGGCCCGCGTCCCCGCAGT.................................................211.000.00-----------------------------------------------------------------------------1.00-----------------------------------------------------------------------------
......................................................................................................................................................................................CTCACCGGCCCGCGTCCCCGCAGAAT...............................................2611.0025.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................GAGGGCCGGGGGAGCGC......................................................................................................................................................1711.001.00----1.00------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................AGAGGCGGAGGGCGCCGGG.........................................................................................................191.000.00-----------------------------------------------------------------------------------------1.00-----------------------------------------------------------------
.CCCCTTCAGAAGTGGGAGGAC.........................................................................................................................................................................................................................................2111.001.00-----------------------------------------1.00-----------------------------------------------------------------------------------------------------------------
....CTTCAGAAGTGGGAGGACAGCGC....................................................................................................................................................................................................................................2311.001.00---1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
.....TTCAGAAGTGGGAGGACAGCGC....................................................................................................................................................................................................................................2211.001.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................TGCGGGGCGGGGCCTGGGGTTTTAT................................................................................251.000.00------------------------------------1.00----------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................TCACCGGCCCGCGTCCCCGCAGTA................................................2411.003.00----------------------------------------------------------------------------------------------------------------------------1.00------------------------------
..........................................................................................................................................................................................................................GACGCTGTACGCCGTGGTGGAGAACGTGC........2911.001.00---------------------------------------------------------------------------------------------1.00-------------------------------------------------------------
.....................................................................................................................................................ATGCGGGGCGGGGCCTGGGGT.....................................................................................2111.001.001.00----------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................GCGGGGCGGGGCCTGGGGTTGC..................................................................................2211.001.00-----------------------------------------------------------------1.00-----------------------------------------------------------------------------------------
......................................................................................................................................................TGCGGGGCGGGGCCTGGGGTTGCCAA...............................................................................2611.001.00---------------------------------------------------------------------------------------------------1.00-------------------------------------------------------
...............GGAGGACAGCGCCCACAAGCCACAG.......................................................................................................................................................................................................................2511.001.00---1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
..........................CCCACAAGCCACAGAGCCTAGACA.............................................................................................................................................................................................................2411.001.00-----------------------------------------------------------------------------------------------1.00-----------------------------------------------------------
................................................................CGGCTGGAGACGAGGCAG.............................................................................................................................................................................181.000.00--------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................TCACCGGCCCGCGTCCCCGCA...................................................2111.001.00----------------------------------------------------------------------1.00------------------------------------------------------------------------------------
.......CAGAAGTGGGAGGACAGCGC....................................................................................................................................................................................................................................2011.001.00-------------------------------------------------------------------------------------------------------------------------------------1.00---------------------
.....................................................................................................................................................ATGCGGGGCGGGGCCTGAA.......................................................................................191.000.00-------------------------------------------------------------------1.00---------------------------------------------------------------------------------------
......................................................................................................................................................................................CTCACCGGCCCGCGTCCCCGCCA..................................................2311.009.00-------------------------------------1.00---------------------------------------------------------------------------------------------------------------------
.........GAAGTGGGAGGACAGCGC....................................................................................................................................................................................................................................1811.001.00---1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................CGCTGTACGCCGTGGCGGA................191.000.00------------------------------------------------------------------------------------------1.00----------------------------------------------------------------
...................................................................CTGGAGACGAGGAGGCTGG.........................................................................................................................................................................1911.001.00----------------1.00------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................GTGGAGAACGTGCCCCCGTT.2011.001.00---1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................CTCACCGGCCCGCGTCCCCGCAATT................................................2511.0017.00--------------------------------------------------------------------1.00--------------------------------------------------------------------------------------
......................................................................................................................................................................................CTCACCGGCCCGCGTCCCCAG....................................................2111.002.00---------------------------------------------1.00-------------------------------------------------------------------------------------------------------------
...................................................................................................................................................GGATGCGGGGCGGGGATTG.........................................................................................191.000.00--------------------------------------------------------------1.00--------------------------------------------------------------------------------------------
................GAGGACAGCGCCCACAAGCCAC.........................................................................................................................................................................................................................2211.001.00-----------------------------------------------------------1.00-----------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................CGTGGTGGAGAACGTGCC.......1811.001.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................AGGGCCGGGGGAGCGTT.....................................................................................................................................................171.000.00----1.00------------------------------------------------------------------------------------------------------------------------------------------------------
.........GAAGTGGGAGGACAGCG.....................................................................................................................................................................................................................................1721.001.00---------------------------------------------------------------------------------------------------------------------------------------------1.00-------------
.......................................................................................................................................................................................TCACCGGCCCGCGTCCCCGCAGA.................................................2311.003.00--------------------------------------------------------1.00--------------------------------------------------------------------------------------------------
......................................................................................................................................................................................CTCACCGGCCCGCGTCCCCGTAGT.................................................2411.003.00-----------------------------------------------------------------------------------------------------1.00-----------------------------------------------------
..............................................................................................CGGGGGAGCGCGGGAGGC...............................................................................................................................................1811.001.00------------------1.00----------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................TCACCGGCCCGCGTCCCCGCAGAA................................................2411.003.00-------------------------------------------------------------------------1.00---------------------------------------------------------------------------------
......................................................................................................................................................................................CTCACCGGCCCGCGTCCCCGCACT.................................................2411.0017.00-----------------------------------------------------1.00-----------------------------------------------------------------------------------------------------
......TCAGAAGTGGGAGGACAG.......................................................................................................................................................................................................................................1811.001.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................CTCACCGGCCCGCGTCCCCGA....................................................2111.003.00--------------------------------------------1.00--------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................GCTCACCGGCCCGCGTCA........................................................181.000.00----------------------------------------------------------------------------------------------------------------------------------------------------1.00------
...........................................................................................................................................................................................................................ACGCTGTACGCCGTGG....................1611.001.00---------------------------1.00-------------------------------------------------------------------------------------------------------------------------------
...............................................................................................GGGGGAGCGCGGGAGGCCCG............................................................................................................................................201.000.00------------------1.00----------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................TCACCGGCCCGCGTCCCCGCAGTTT...............................................2511.003.00-------------------------------------------------------------------------------------------------------1.00---------------------------------------------------
..........................................................................................GGGCCGGGGGAGCGCCGCG..................................................................................................................................................191.000.00---------------------------------------------------------1.00-------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................ACGCTGTACGCCGTGGTGGAG...............2111.001.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................CGCGGGATGCGGGGCGGGGCCT..........................................................................................2211.001.00--------------------------------------------------------------------------------------------------------------------------1.00--------------------------------
......................................................................................................................................................TGCGGGGCGGGGCCTGGGGTTGCC.................................................................................2411.001.00----------------------------------------------1.00------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................CTGATGACCCCGCG....................................1430.330.33----------0.33------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................CCGGCCCGCGTCCCCGC....................................................1730.330.33--------------------------------------------------------------------0.33--------------------------------------------------------------------------------------
...............................................................................................GGGGGAGCGCGGGAGG................................................................................................................................................1630.330.33------------------0.33----------------------------------------------------------------------------------------------------------------------------------------
...............................................................................AGGCTGGGGGAGGGCCG...............................................................................................................................................................1760.330.33---------------------------------------------------------------------0.33-------------------------------------------------------------------------------------
......................................................................................................................................................................................CTCACCGGCCCGCG...........................................................1440.250.25-------------------------------0.25---------------------------------------------------------------------------------------------------------------------------
......................................................................................GGGAGGGCCGGGGGAGC........................................................................................................................................................1760.170.17---------------------------------------------------------------------------------------------------------------------------------------------------------0.17-
................................................................CGGCTGGAGACGA..................................................................................................................................................................................1390.110.11-------------------0.11---------------------------------------------------------------------------------------------------------------------------------------

Antisense strand
CCCCCTTCAGAAGTGGGAGGACAGCGCCCACAAGCCACAGAGCCTAGACAGTGAGTTTCTCCCGCGGCTGGAGACGAGGAGGCTGGGGGAGGGCCGGGGGAGCGCGGGAGGCGCTCCCAGAGGGGACCACGAGAGGCGGAGGGCGCGGGATGCGGGGCGGGGCCTGGGGTTGCCGCCCGAGGCTCACCGGCCCGCGTCCCCGCAGCTGATGACCCCGCGACGCTGTACGCCGTGGTGGAGAACGTGCCCCCGTTG
................................................................................................................................................((((((((((((.((((((((.((((....)))).)))))..))).)))))))))).))....................................................
................................................................................................................................................145.........................................................205................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR189783SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577746(Rovira)
total RNA. (breast)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029127(GSM416756)
A549. (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		TAX577740(Rovira)
total RNA. (breast)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR038863(GSM458546)
MM603. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR029124(GSM416753)
HeLa. (hela)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		GSM532876(GSM532876)
G547T. (cervix)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)		SRR040028(GSM532913)
G026N. (cervix)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189786SRR040032(GSM532917)
G603N. (cervix)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		TAX577741(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532884(GSM532884)
G871T. (cervix)		SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)		SRR038854(GSM458537)
MM653. (cell line)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		TAX577580(Rovira)
total RNA. (breast)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029131(GSM416760)
MCF7. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577453(Rovira)
total RNA. (breast)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191536(GSM715646)
183genomic small RNA (size selected RNA from . (breast)		SRR191458(GSM715568)
28genomic small RNA (size selected RNA from t. (breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR191460(GSM715570)
33genomic small RNA (size selected RNA from t. (breast)		SRR191456(GSM715566)
182genomic small RNA (size selected RNA from . (breast)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029126(GSM416755)
143B. (cell line)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189782DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038855(GSM458538)
D10. (cell line)		SRR191573(GSM715683)
68genomic small RNA (size selected RNA from t. (breast)		SRR029130(GSM416759)
DLD2. (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR191635(GSM715745)
9genomic small RNA (size selected RNA from to. (breast)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
.............................................................................................................................................................................CGCCCGAGGCTCACCT.................................................................. 164.000.00-----------4.00-----------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................ACCGGCCCGCGTCCCCCCC................................................... 192.000.00-------------------------------------------1.00-------------1.00-------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................ACCGGCCCGCGTCCCCC..................................................... 171.000.00------------------------------------------------------------------------------------------------------1.00----------------------------------------------------
.........................................................................................................................................................................................ACCGGCCCGCGTCCCCCC.................................................... 181.000.00-----------------------------------------------------------------------------------------------------------1.00-----------------------------------------------
........................................................................................................................................................................GTTGCCGCCCGAGGCACCA.................................................................... 191.000.00----------------------------------------------------------------------------------------------------------------------------------1.00------------------------
........................................................................................GAGGGCCGGGGGAGCGGCC.................................................................................................................................................... 191.000.00-----------------------------------------------------------------------------------------------------------------------------------1.00-----------------------
...............................................................................................GGGGGAGCGCGGGAGGCTG............................................................................................................................................. 191.000.00------------------------------------------------------------------------------1.00----------------------------------------------------------------------------
..............................................................................GAGGCTGGGGGAGGGGCAA.............................................................................................................................................................. 191.000.00----------------1.00------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................TGGGGTTGCCGCCCG............................................................................ 1511.001.00----------------------1.00------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................CCAGAGGGGACCACGAG.......................................................................................................................... 1720.500.50--------------------------------------------------------------------------------------------------------------------------------------------------------0.50--
..........................................................................................................................................GAGGGCGCGGGATG....................................................................................................... 1490.440.44--------------------------------0.22-------------------------------------0.22------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................CGCGACGCTGTA............................ 1230.330.33---------0.33-------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................GTTGCCGCCCGA........................................................................... 1270.140.14---------------------------------0.14-------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................TCACCGGCCCGCG........................................................... 1370.140.14----------------------------------------------------------------------------------------------------------------------------------------------------------0.14