ID: uc001qhu.11
GENE: IQSEC3(11)
chr12:280278-280462+


(1)
AGO1.ip
(1)
BRAIN
(3)
BREAST
(5)
CELL-LINE
(2)
LIVER
(1)
TESTES

Sense strand
CCAAAAGGGAAGCCGCGCTCAGGGAGAGGCCGGCGGAGAGCACGGTGGAGGTAAGTGGAGCCCTGGTTGCCCAGGTGAGTGACTACCCTGCCCCCTTGTTCTTCTTCTCACCGTCTCTGTTGTTTCTCTTCTCAGGTATTAATCAATGCCTCCCCAGCCCGACTCACCATTTTACCAATTTCAAG
....................................................(((.(((((..(((..((...((((((.((..((...........))...))..))))))))..)))..))))).))).......................................................
..................................................51..................................................................................135................................................
SizePerfect hitTotal NormPerfect NormSRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
TAX577580(Rovira)
total RNA. (breast)
SRR553576(SRX182782)
source: Testis. (testes)
TAX577590(Rovira)
total RNA. (breast)
TAX577453(Rovira)
total RNA. (breast)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
...........................................................GCCCTGGTTGCCCAGGGGT...........................................................................................................191.000.00--1.00---------
.........AAGCCGCGCTCAGGGAGG..............................................................................................................................................................181.000.00----------1.00-
...........GCCGCGCTCAGGGAGGACC...........................................................................................................................................................191.000.00-1.00----------
...........................................................GCCCTGGTTGCCCAGTAGT...........................................................................................................191.000.00--1.00---------
..................................................................................................................................................TGCCTCCCCAGCCCGACT.....................1820.500.50-----------0.50

Antisense strand
CCAAAAGGGAAGCCGCGCTCAGGGAGAGGCCGGCGGAGAGCACGGTGGAGGTAAGTGGAGCCCTGGTTGCCCAGGTGAGTGACTACCCTGCCCCCTTGTTCTTCTTCTCACCGTCTCTGTTGTTTCTCTTCTCAGGTATTAATCAATGCCTCCCCAGCCCGACTCACCATTTTACCAATTTCAAG
....................................................(((.(((((..(((..((...((((((.((..((...........))...))..))))))))..)))..))))).))).......................................................
..................................................51..................................................................................135................................................
SizePerfect hitTotal NormPerfect NormSRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
TAX577580(Rovira)
total RNA. (breast)
SRR553576(SRX182782)
source: Testis. (testes)
TAX577590(Rovira)
total RNA. (breast)
TAX577453(Rovira)
total RNA. (breast)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
............................................................................................CCCTTGTTCTTCTTCTCGCG......................................................................... 204.000.004.00-----------
.............................................................................................................................................................CCCGACTCACCATTTTACC......... 1911.001.00-----1.00------
.................................................................................................................................................ATGCCTCCCCAGCCCGACTCACCATT.............. 2611.001.00---------1.00--
......................................................................................................................GTTGTTTCTCTTCTCAGGTATTAATCAA....................................... 2811.001.00---1.00--------
..........................................................................................................................................................CAGCCCGACTCACCAACC............. 181.000.00----1.00-------
........................................................................................................................................................CCCAGCCCGACTCACCTGT.............. 191.000.00-------1.00----
.................................................................................................................................................................ACTCACCATTTTACCGAAG..... 191.000.00-1.00----------
...........................................................................................................................................................AGCCCGACTCACCATCAC............ 181.000.00------1.00-----
..................................................................................................................................................TGCCTCCCCAGCCCGACTCACCATTTC............ 271.000.00--------1.00---