ID: uc001obg.5
GENE: MAP4K2(5)
chr11:64559509-64559693-


(1)
AGO1.ip 		(2)
AGO2.ip 		(1)
AGO3.ip 		(10)
B-CELL 		(6)
BRAIN 		(36)
BREAST 		(45)
CELL-LINE 		(5)
CERVIX 		(2)
FIBROBLAST 		(8)
HEART 		(7)
HELA 		(1)
KIDNEY 		(7)
LIVER 		(4)
OTHER 		(1)
RRP40.ip 		(30)
SKIN 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
TGCTCCTGCTGCAGTGGTATGAGCCGCTGCAGAAGTTTCTGCTGCTGAAGGTGAGGGGCGGTGGGGGGAGGCCCAGGGCACCCTCAGAGCTCTGGGGGGAGAAATGGAGACCTGAGCATCCCTGCTGCCCCCTAGAACTTCTCCAGCCCTCTGCCCAGCCCAGCTGGGATGCTGGAGCCGCTGGT
......................................................(((((((..((((...((.((((...(((((((....)))))))............)))).)).))))..)))))))......................................................
..................................................51..................................................................................135................................................
SizePerfect hitTotal NormPerfect NormSRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR037937(GSM510475)
293cand2. (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR029125(GSM416754)
U2OS. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR029130(GSM416759)
DLD2. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR029126(GSM416755)
143B. (cell line)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040016(GSM532901)
G645N. (cervix)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR029124(GSM416753)
HeLa. (hela)		TAX577580(Rovira)
total RNA. (breast)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR038861(GSM458544)
MM466. (cell line)		SRR191617(GSM715727)
104genomic small RNA (size selected RNA from . (breast)		TAX577453(Rovira)
total RNA. (breast)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)		SRR040028(GSM532913)
G026N. (cervix)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038858(GSM458541)
MEL202. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191520(GSM715630)
89genomic small RNA (size selected RNA from t. (breast)		TAX577739(Rovira)
total RNA. (breast)		SRR191396(GSM715506)
29genomic small RNA (size selected RNA from t. (breast)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR040039(GSM532924)
G531T. (cervix)		SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR038863(GSM458546)
MM603. (cell line)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR029127(GSM416756)
A549. (cell line)		SRR191581(GSM715691)
104genomic small RNA (size selected RNA from . (breast)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR037936(GSM510474)
293cand1. (cell line)		SRR040030(GSM532915)
G013N. (cervix)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		TAX577738(Rovira)
total RNA. (breast)		TAX577590(Rovira)
total RNA. (breast)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR191575(GSM715685)
85genomic small RNA (size selected RNA from t. (breast)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR040006(GSM532891)
G601N. (cervix)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)		TAX577746(Rovira)
total RNA. (breast)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191529(GSM715639)
131genomic small RNA (size selected RNA from . (breast)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)		SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)		SRR191508(GSM715618)
152genomic small RNA (size selected RNA from . (breast)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		SRR038855(GSM458538)
D10. (cell line)		SRR553575(SRX182781)
source: Kidney. (Kidney)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191573(GSM715683)
68genomic small RNA (size selected RNA from t. (breast)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR191571(GSM715681)
63genomic small RNA (size selected RNA from t. (breast)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038852(GSM458535)
QF1160MB. (cell line)
..................................................................................................................AGCATCCCTGCTGCCCCCTAGT.................................................221120.0052.006.00-4.008.006.00-1.00-2.001.002.005.004.00-1.001.001.00-2.001.001.003.003.002.003.001.001.00----2.00-1.002.00---1.002.00-3.001.00---1.002.00----1.00-1.00-2.00---2.002.00-1.001.002.00--2.00-2.001.002.00----1.00---1.001.00-1.001.00-1.00---------------1.001.001.00--1.001.00-1.00---1.001.001.00--1.00-------1.00-1.001.001.00---1.00--------1.001.001.00-----1.00----1.00--1.00-
..................................................................................................................AGCATCCCTGCTGCCCCCTAGA.................................................22193.0093.007.00-4.002.002.00-3.0010.003.00-1.001.002.006.001.002.002.001.00-4.00-1.00-1.00--1.003.00--2.001.00----1.00-2.00-2.00---1.00-----1.00--2.00----1.001.00------2.001.00---1.00-2.00-1.00----1.00---------1.00---1.001.00---1.00-1.00-----1.00--1.00--------1.00---1.00-------------------------1.001.001.00----1.00-----1.00
..................................................................................................................AGCATCCCTGCTGCCCCCTAG..................................................21152.0052.004.00--1.001.00-6.00--2.00-----2.001.003.002.00-2.00-1.00-1.001.001.00-1.001.00---2.00-2.00---------1.001.00-------1.001.00--1.00-----1.00----1.00------1.00------1.00--1.00-----------1.00--------------1.00----------1.001.00-1.00-----1.00-1.00-------------------1.00-------
..................................................GTGAGGGGCGGTGGGGGGAGGCCCAGGGCACCCTCAGAGCTCTGGGGGGAGAAATGGAGACCTGAGCATCCCTGCTGCCCCCTAG..................................................85122.0022.00-9.00---12.00----------------------------------------------------------------------------------------------------------------------------------------------1.00--------------
..................................................................................................................AGCATCCCTGCTGCCCCCTAGTA................................................23114.0052.00--1.00-2.00---------------------------1.00---------1.001.001.00------------1.00-----------1.00------------------1.00-----------------1.00-----1.00------------------------1.00-1.00-----------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTAGAA................................................2319.009.00-----------------------1.00-1.00------1.00------1.001.00-------2.00------------------------------------------1.00------------------------------------------------------------1.00----------
..................................................................................................................AGCATCCCTGCTGCCCCCTAGAT................................................2318.0093.001.00-------------2.00---1.00------------------------------------1.00-1.00--------------------------------------1.00------------------------------------------------------------1.00-----
..................................................................................................................AGCATCCCTGCTGCCCCCTAGC.................................................2215.0052.00--1.00----------------------------------------------------------------1.00--------------------------------1.00----------------------------1.00-----------------------------1.00---
..................................................................................................................AGCATCCCTGCTGCCCCCTAGTT................................................2314.0052.00----1.00-----------1.00--------------------------------------------------------------------------------------------------------1.00---------------------1.00-------------------
...................................................TGAGGGGCGGTGGGGGGAGGCCCAGGGCACCCTCAGAGCTCTGGGGGGAGAAATGGAGACCTGAGCATCCCTGCTGCCCCCTAG..................................................8414.004.00-4.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------
................GTATGAGCCGCTGCAGAAGTT....................................................................................................................................................2114.004.00----------------------------------1.00--3.00-----------------------------------------------------------------------------------------------------------------------------
................GTATGAGCCGCTGCAGAAGTTT...................................................................................................................................................2214.004.00-----------1.00--------------------1.00----------------1.00------------------------------------------------------------------------------------------1.00----------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTA...................................................2014.004.001.00-------1.00-------------------------------------------1.00-------------------------1.00------------------------------------------------------------------------------------
..................................................GTGAGGGGCGGTGGGGGGAGGCCCAGGGCACCCTCAGAGCTCTGGGGGGAGAAATGGAGACCTGAGCATCCCTGCTGCCCCCTAGT.................................................8613.0022.00-3.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTAGTAA...............................................2413.0052.00--2.00-----1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................GCATCCCTGCTGCCCCCTAGT.................................................213.000.00--------------------------------------------------------------2.00---------------------------------------------------1.00------------------------------------------------
................GTATGAGCCGCTGCAGAAGT.....................................................................................................................................................2012.002.00-------------------------------------------2.00-----------------------------------------------------------------------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTAGTTT...............................................2412.0052.00-------------------------------------------------------------------------------------------------1.00------------------------1.00----------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCC.....................................................1812.002.00-----------------------------2.00-------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTAGAAA...............................................2412.009.00----------2.00--------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTAT..................................................2112.004.00-------------------------1.00----1.00------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTAGTAT...............................................2412.0052.00----------------------------1.00---------------------1.00----------------------------------------------------------------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTCGT.................................................222.000.00-------------------------------------------------------------------------------1.00--------------------------------------------------------------------------1.00--------
..................................................................................................................AGCATCCCTGCTGCCCCCTAGG.................................................2211.0052.00---1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCAAAA..................................................211.000.00--------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTATA.................................................2211.004.00---------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................TGAGCATCCCTGCTGCCCCT.....................................................201.000.00---------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................ACTTCTCCAGCCCTCTGTG..............................191.000.00-----------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
....................................................GAGGGGCGGTGGGGGCTT...................................................................................................................181.000.00----------------------------------------------------------------------------------------------------------------------------------------------1.00--------------------
.....................................................AGGGGCGGTGGGGGGCGGA.................................................................................................................191.000.00------------------------------------------------------------------------------------------------------1.00------------------------------------------------------------
..........................................................................................................GAGACCTGAGCATCCCTGCTGCCCCCT....................................................2711.001.00---------------------------------------------------------------------------------------------1.00---------------------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTATT.................................................2211.004.00------------------------------------------------------------------------------------------------------------------------------------------------1.00------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTAGACA...............................................2411.0093.00----------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTAGTAG...............................................2411.0052.00-----------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------
................GTATGAGCCGCTGCAGAAGTTA...................................................................................................................................................2211.004.00-----------------------------------------------------------------------------------------1.00-------------------------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTAGTG................................................2311.0052.00------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTAGTAAT..............................................2511.0052.00----------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................GCATCCCTGCTGCCCCCTAGTA................................................221.000.00---------------------------------------------------------------------------------------------------------------------------------------------1.00---------------------
...............GGTATGAGCCGCTGCAGAAGTTTCTG................................................................................................................................................2611.001.00-------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------
................GTATGAGCCGCTGCAGA........................................................................................................................................................1711.001.00---------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTAGTATT..............................................2511.0052.00------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTCTA.................................................221.000.00---------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................CTGGGATGCTGGAGCCG.....1711.001.00---------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------
............................................................................................TGGGGGGAGAAATGGAGTTTG........................................................................211.000.00------------------------------------------------------------------------------------------------------------------------------1.00------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTAGTAGA..............................................2511.0052.00----------------------------------------------------------------------------------------------------------------------1.00--------------------------------------------
...................................................................................................................GCATCCCTGCTGCCCCCTAGTGT...............................................231.000.00-----------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTAGTTA...............................................2411.0052.00--------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
................GTATGAGCCGCTGCAGCAGT.....................................................................................................................................................201.000.00--------------------------------------------------------------------------------------------------------------------------------------1.00----------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTAGCAA...............................................2411.0052.00--1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------
.................TATGAGCCGCTGCAGAAGTTTCT.................................................................................................................................................2311.001.00--------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCTTAG..................................................211.000.00---------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTCGAT................................................231.000.00----------------------------------------------------------------------------------------------------------------------------------------------------------------1.00--
..................................................................................................................AGCATCCCTGCTGCCCCCTAGAAT...............................................2411.009.00----------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTAGAAGA..............................................2511.009.001.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................TCAGAGCTCTGGGGGGCCAG..................................................................................201.000.00---------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------
.................................AGTTTCTGCTGCTGAAG.......................................................................................................................................1750.200.20---------------------------0.20---------------------------------------------------------------------------------------------------------------------------------------

Antisense strand
TGCTCCTGCTGCAGTGGTATGAGCCGCTGCAGAAGTTTCTGCTGCTGAAGGTGAGGGGCGGTGGGGGGAGGCCCAGGGCACCCTCAGAGCTCTGGGGGGAGAAATGGAGACCTGAGCATCCCTGCTGCCCCCTAGAACTTCTCCAGCCCTCTGCCCAGCCCAGCTGGGATGCTGGAGCCGCTGGT
......................................................(((((((..((((...((.((((...(((((((....)))))))............)))).)).))))..)))))))......................................................
..................................................51..................................................................................135................................................
SizePerfect hitTotal NormPerfect NormSRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR037937(GSM510475)
293cand2. (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR029125(GSM416754)
U2OS. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR029130(GSM416759)
DLD2. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR029126(GSM416755)
143B. (cell line)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040016(GSM532901)
G645N. (cervix)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR029124(GSM416753)
HeLa. (hela)		TAX577580(Rovira)
total RNA. (breast)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR038861(GSM458544)
MM466. (cell line)		SRR191617(GSM715727)
104genomic small RNA (size selected RNA from . (breast)		TAX577453(Rovira)
total RNA. (breast)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)		SRR040028(GSM532913)
G026N. (cervix)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038858(GSM458541)
MEL202. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191520(GSM715630)
89genomic small RNA (size selected RNA from t. (breast)		TAX577739(Rovira)
total RNA. (breast)		SRR191396(GSM715506)
29genomic small RNA (size selected RNA from t. (breast)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR040039(GSM532924)
G531T. (cervix)		SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR038863(GSM458546)
MM603. (cell line)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR029127(GSM416756)
A549. (cell line)		SRR191581(GSM715691)
104genomic small RNA (size selected RNA from . (breast)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR037936(GSM510474)
293cand1. (cell line)		SRR040030(GSM532915)
G013N. (cervix)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		TAX577738(Rovira)
total RNA. (breast)		TAX577590(Rovira)
total RNA. (breast)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR191575(GSM715685)
85genomic small RNA (size selected RNA from t. (breast)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR040006(GSM532891)
G601N. (cervix)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)		TAX577746(Rovira)
total RNA. (breast)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191529(GSM715639)
131genomic small RNA (size selected RNA from . (breast)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)		SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)		SRR191508(GSM715618)
152genomic small RNA (size selected RNA from . (breast)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		SRR038855(GSM458538)
D10. (cell line)		SRR553575(SRX182781)
source: Kidney. (Kidney)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191573(GSM715683)
68genomic small RNA (size selected RNA from t. (breast)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR191571(GSM715681)
63genomic small RNA (size selected RNA from t. (breast)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038852(GSM458535)
QF1160MB. (cell line)
..................................................GTGAGGGGCGGTGGGGACGT................................................................................................................... 202.000.00--------------------------------------------------------------------------1.00-----------------1.00----------------------------------------------------------------------
.....................................................AGGGGCGGTGGGGGGAGTGC................................................................................................................ 201.000.00------------------------------------------------------------------------------------------------------------------------------------------1.00------------------------
...............................GAAGTTTCTGCTGCTGAGAGA..................................................................................................................................... 211.000.00--------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................ATCCCTGCTGCCCCCTTCTG................................................ 201.000.00--------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------
..................................................GTGAGGGGCGGTGGGGACG.................................................................................................................... 191.000.00--------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------
.......................................................................CCCAGGGCACCCTCATG................................................................................................. 171.000.00---------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------
.......GCTGCAGTGGTATGACTCG............................................................................................................................................................... 191.000.00------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................CTCTGCCCAGCCCAGCT.................... 1770.290.29--------------------0.29----------------------------------------------------------------------------------------------------------------------------------------------