ID: uc001neq.2
GENE: MADD(2)
chr11:47297250-47297499+


(1)
AGO1.ip 		(3)
AGO2.ip 		(4)
B-CELL 		(7)
BRAIN 		(10)
BREAST 		(21)
CELL-LINE 		(3)
CERVIX 		(5)
HEART 		(3)
HELA 		(2)
LIVER 		(3)
OTHER 		(1)
RRP40.ip 		(11)
SKIN 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
AGTCTTACCCAGTATATATCTTTACATTTGCTTTTGCCATTGTATATACTTTCCGGTCCTATCTGAGCTCAGAGACTGGGCTTTCTTAATGATGCTCCGTTTCCCATTGTCATCATTAGAGCCTCTGTGGTGATACTGAGTTGCAGTAGGGTATCAGCTTCTGATGCTAATGTGTCTGATTCCTGCTGTCTGCTTCTCAGGGACACCATGTGGCGGATCTTTACTGGATCGCTGCTGGTAGAGGAGAAGT
.......................................................................................................................................(((((..(((((((((.((((......(((((....))))))))))))))))))......)))))..................................................
................................................................................................................................129....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037943(GSM510481)
293DcrTN. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR189782SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040011(GSM532896)
G529T. (cervix)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		TAX577739(Rovira)
total RNA. (breast)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577741(Rovira)
total RNA. (breast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		GSM532874(GSM532874)
G699T. (cervix)		SRR038857(GSM458540)
D20. (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR189786SRR037935(GSM510473)
293cand3. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		TAX577744(Rovira)
total RNA. (breast)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM541797(GSM541797)
differentiated human embryonic stem cells. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR191499(GSM715609)
6genomic small RNA (size selected RNA from to. (breast)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR029131(GSM416760)
MCF7. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR029125(GSM416754)
U2OS. (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191498(GSM715608)
3genomic small RNA (size selected RNA from to. (breast)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
.....................................................................................................................................TACTGAGTTGCAGTAGGGTAT................................................................................................21116.0016.001.002.001.00-1.00-1.00--2.00---1.00---2.00-1.00--1.00-------1.00---------------------------------1.00-1.00-----
.....................................................................................................................................TACTGAGTTGCAGTAGGGTATC...............................................................................................22114.0014.00---4.001.00-1.00--1.00--1.00----------1.00-1.00----------1.00-1.00--1.00------1.00-----------------------
........................................................................................................................................TGAGTTGCAGTAGGGTATCAGCT...........................................................................................23110.0010.00--1.00-----------1.00----------1.00-1.00-------1.00----1.00---1.001.00----------------1.001.00--------
........................................................................................................................................TGAGTTGCAGTAGGGTATCA..............................................................................................2014.004.001.00---------------2.00---------------------------------------1.00---------------
..................................................................................................................................................................................ATTCCTGCTGTCTGCTTCTCAGA.................................................2314.001.004.00-----------------------------------------------------------------------
.....................................................................................................................................TACTGAGTTGCAGTAGGGTATCA..............................................................................................2314.004.00-1.00------------1.00--------------1.00-------------------------------1.00----------
..................................................................................................................................................................................ATTCCTGCTGTCTGCTTCTCAGTT................................................2414.001.002.00-----------------------1.00-1.00---------------------------------------------
.....................................................................................................................................TACTGAGTTGCAGTAGGGTAA................................................................................................2113.001.00------1.00------1.00-----1.00----------------------------------------------------
.................................................................................................................................................................................................................................GGATCGCTGCTGGTAGAGGAGA...2213.003.00----------1.00---------2.00---------------------------------------------------
.....................................................................................................................................TACTGAGTTGCAGTAGGGTATCAG.............................................................................................2413.003.00-------3.00----------------------------------------------------------------
..............................................................................................................................................................................................................................ACTGGATCGCTGCTGGTAGAGGAG....2413.003.00------------------1.00-------------------------------1.00--------------1.00------
........................................................................................................................................TGAGTTGCAGTAGGGTATCAGC............................................................................................2212.002.00--------1.00----------------------1.00----------------------------------------
.........................................................................................................................................................................................................................TCTTTACTGGATCGCTGCTGGTAGA........2512.002.00------------------------------------------1.00------------------------1.00----
......................................................................................................................................ACTGAGTTGCAGTAGGGTATCA..............................................................................................2212.002.00----1.00--------------------------------1.00----------------------------------
......................................................................................................................................ACTGAGTTGCAGTAGGGTATCAGCTTCT........................................................................................2812.002.00-2.00----------------------------------------------------------------------
.....................................................................................................................................TACTGAGTTGCAGTAGGGTATCT..............................................................................................2312.0014.00-------------------------------------------1.00--1.00-------------------------
.......................................................................................................................................................................................................................GATCTTTACTGGATCGCTGCTGGTAG.........2612.002.00------------1.00----------------------------------1.00------------------------
........................................................................................................................................TGAGTTGCAGTAGGGTATCAGCA...........................................................................................2311.002.00--1.00---------------------------------------------------------------------
.......................................................................................................................................CTGAGTTGCAGTAGGGTATCA..............................................................................................2111.001.00--1.00---------------------------------------------------------------------
........................................................................................................................................TGAGTTGCAGTAGGGTATCAGCTAGC........................................................................................2611.0010.00--------------------------------1.00---------------------------------------
.....................................................................................................................................TACTGAGTTGCAGTAGGGTATCAGA............................................................................................2511.003.00----------------------------------1.00-------------------------------------
.....................................................................................................................................TACTGAGTTGCAGTAGGGTA.................................................................................................2011.001.00--------1.00---------------------------------------------------------------
........................................................................................................................................TGAGTTGCAGTAGGGTAGAA..............................................................................................201.000.00-----------1.00------------------------------------------------------------
.....................................................CGGTCCTATCTGAGCTCAGAGA...............................................................................................................................................................................2211.001.00-------------------------------------------------1.00----------------------
..........................................................................................................................................................................................................................CTTTACTGGATCGCTGCTGG............2011.001.00-----1.00------------------------------------------------------------------
.....................................................................................................................................................................................................................................CGCTGCTGGTAGAGGAGA...1811.001.00---------------------------------------1.00--------------------------------
....................................................................................................................................................................................TCCTGCTGTCTGCTTCTCAGTT................................................221.000.00-------------------------------------------------------1.00----------------
.....................................................................................................................................TACTGAGTTGCAGTAGGGTATA...............................................................................................2211.0016.00--------------------------------------------------------------------1.00---
........................................................................................................................................TGAGTTGCAGTAGGGTATCAGCTT..........................................................................................2411.001.00----1.00-------------------------------------------------------------------
...................................................................................................................................................................................TTCCTGCTGTCTGCTTCTCAGTT................................................231.000.00---------------------------------------------------------1.00--------------
................................................................................................................................................................................TGATTCCTGCTGTCTGCTTCT.....................................................2111.001.00---------------------------------------------------1.00--------------------
.....................................................................................................................................TACTGAGTTGCAGTAGGGTATCG..............................................................................................2311.0014.00----------------------1.00-------------------------------------------------
................................................CTTTCCGGTCCTATCTGAGCTCAGAGAC..............................................................................................................................................................................2811.001.00---------------------1.00--------------------------------------------------
......................................................................................................................................ACTGAGTTGCAGTAGGGTATCAGCT...........................................................................................2511.001.00----------------------------------------------------1.00-------------------
...................................................................................................................TTAGAGCCTCTGTGGTGATACTGAGTTGCAGTAGGG...................................................................................................3611.001.00-----------------------------------------------------1.00------------------
......................................................................................................................................ACTGAGTTGCAGTAGGGTATCAGCTTTT........................................................................................281.000.00-1.00----------------------------------------------------------------------
.....................................................................................................................................TACTGAGTTGCAGTAGGGT..................................................................................................1911.001.00-----------------------------------------------------------1.00------------
...............................................................................................................................................................................................................................CTGGATCGCTGCTGGTAGAG.......2011.001.00-----1.00------------------------------------------------------------------
...............................................................................................................................................................................................................................CTGGATCGCTGCTGGTAGAGG......2111.001.00-----1.00------------------------------------------------------------------
.....................................................................................................................................TACTGAGTTGCAGTAGGGTATCTT.............................................................................................2411.0014.00---------------1.00--------------------------------------------------------
.....................................................................................................................................TACTGAGTTGCAGTAGGGTATCAGCT...........................................................................................2611.001.00---------------------------------1.00--------------------------------------
............................................................................................................................................................................................................................TTACTGGATCGCTGCTGGTAGAGGAG....2611.001.00------------------------------------------------------1.00-----------------
...................................................................................................................................................AGGGTATCAGCTTCTGATGCT..................................................................................2111.001.00----------------------------1.00-------------------------------------------
..................................................................................................................................................................................ATTCCTGCTGTCTGCTTCTCAG..................................................2211.001.00--------1.00---------------------------------------------------------------
..............................................................................................................................................................................................................................ACTGGATCGCTGCTGGTAGAGG......2211.001.00------------------------------------------------------------1.00-----------
......................................................................................................................................ACTGAGTTGCAGTAGGGTAT................................................................................................2011.001.00----------------------------------------------------------1.00-------------
...................................................................................................................................................................................................................................ATCGCTGCTGGTAGAGGAGAAGT2311.001.00---------------1.00--------------------------------------------------------
.....................................................................................................................................TACTGAGTTGCAGTAGGGGAT................................................................................................211.000.00-1.00----------------------------------------------------------------------
..................................................................................................................................................................................ATTCCTGCTGTCTGCTTCTCCGTT................................................241.000.00------------------------1.00-----------------------------------------------
.........................................................................................................................................................................................................GACACCATGTGGCGGATCTT.............................2011.001.00---------------------1.00--------------------------------------------------
...........................................................................................................................................GTTGCAGTAGGGTATCGG.............................................................................................181.000.00----------1.00-------------------------------------------------------------
................................................................................................................................................................................................................................TGGATCGCTGCTGGTAGAGGAG....2211.001.00-----------------------1.00------------------------------------------------
.....................................................................................................................................TACTGAGTTGCAGTAGGGTAAAG..............................................................................................2311.001.00------------------1.00-----------------------------------------------------
....................................................................................................................................................................................TCCTGCTGTCTGCTTCTCATGA................................................221.000.00-----------1.00------------------------------------------------------------
..................................................................................................................................................................................ATTCCTGCTGTCTGCTTCT.....................................................1920.500.50---------------------------------------------------------------------0.50--
.........CAGTATATATCTTTAC.................................................................................................................................................................................................................................1640.250.25----------------------------------------------------------------------0.25-
....................................................................................................................................................................................................................................TCGCTGCTGGTAGA........1440.250.25--------------------------0.25---------------------------------------------

Antisense strand
AGTCTTACCCAGTATATATCTTTACATTTGCTTTTGCCATTGTATATACTTTCCGGTCCTATCTGAGCTCAGAGACTGGGCTTTCTTAATGATGCTCCGTTTCCCATTGTCATCATTAGAGCCTCTGTGGTGATACTGAGTTGCAGTAGGGTATCAGCTTCTGATGCTAATGTGTCTGATTCCTGCTGTCTGCTTCTCAGGGACACCATGTGGCGGATCTTTACTGGATCGCTGCTGGTAGAGGAGAAGT
.......................................................................................................................................(((((..(((((((((.((((......(((((....))))))))))))))))))......)))))..................................................
................................................................................................................................129....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037943(GSM510481)
293DcrTN. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR189782SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040011(GSM532896)
G529T. (cervix)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		TAX577739(Rovira)
total RNA. (breast)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577741(Rovira)
total RNA. (breast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		GSM532874(GSM532874)
G699T. (cervix)		SRR038857(GSM458540)
D20. (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR189786SRR037935(GSM510473)
293cand3. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		TAX577744(Rovira)
total RNA. (breast)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM541797(GSM541797)
differentiated human embryonic stem cells. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR191499(GSM715609)
6genomic small RNA (size selected RNA from to. (breast)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR029131(GSM416760)
MCF7. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR029125(GSM416754)
U2OS. (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191498(GSM715608)
3genomic small RNA (size selected RNA from to. (breast)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
........................................................................................................................................................ATCAGCTTCTGATGCTTTG............................................................................... 191.000.00----------1.00-------------------------------------------------------------
..........................................................................................GATGCTCCGTTTCC.................................................................................................................................................. 1440.250.25-----------------------------------------------------------------------0.25