ID: uc001gvr.17
GENE: KIF21B(17)
chr1:200960804-200961053-


(1)
AGO1.ip 		(2)
AGO2.ip 		(6)
B-CELL 		(15)
BRAIN 		(6)
BREAST 		(18)
CELL-LINE 		(1)
CERVIX 		(1)
HEART 		(4)
LIVER 		(2)
OTHER 		(6)
SKIN 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
TGCCCTTGTGGAGAAAGCAGTTTTCACTGCAACCTCTGGGGAGGGGAGCTCAACCCTGGGTCCCACTTTATCAAGAGTTTGGCTGCATGAGAATCACCCTGAAGCCCAGGCTTTCAACTACAGGGCTAGCCAGCCTGTACACAGACAGAGAGGGCTAAGGTGCCTGAGTGTGGAGCCCAGCCCTCTTCTGTCTCCCACAGTTTCAGATCCGAGCTCTGGAGTCCCAGAAGCGGCAGCAGGAGATGGTCCT
......................................................................................................................................((((....((((((((((((((..(((.((.......)).))).)))))))).))))))...))))..................................................
......................................................................................................................................135..............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM339996(GSM339996)
hues6Neuron. (cell line)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		GSM339994(GSM339994)
hues6. (cell line)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		TAX577580(Rovira)
total RNA. (breast)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR191571(GSM715681)
63genomic small RNA (size selected RNA from t. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189782SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		TAX577745(Rovira)
total RNA. (breast)		SRR040015(GSM532900)
G623T. (cervix)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
...........................................................................................................................................CACAGACAGAGAGGGCTAAGGT.........................................................................................22122.0022.009.00---2.00-2.00--3.002.00---1.001.00-----------------------1.00--1.00-------------------
............................................................................................................................................ACAGACAGAGAGGGCTAAGGT.........................................................................................21117.0017.00-1.007.00--1.002.001.00----2.00-1.00---------------1.00----------1.00--------------------
...........................................................................................................................................CACAGACAGAGAGGGCTAAGGTT........................................................................................2319.0022.00-1.00--1.00---3.00---------1.00--1.00------------1.00-------------1.00-------------
............................................................................................................................................ACAGACAGAGAGGGCTAAGGTG........................................................................................2215.005.00-1.00-1.00-1.00------------1.001.00------------------------------------------
..........................................................................................................................................ACACAGACAGAGAGGGCTAAGGT.........................................................................................2314.004.00-1.00-2.00---1.00------------------------------------------------------
............................................................................................................................................ACAGACAGAGAGGGCTAAGGTAA.......................................................................................2314.0017.00-1.00-1.00----1.00-----------------1.00-----------------------------------
.............................................................................................................................................CAGACAGAGAGGGCTAAGGTG........................................................................................2114.004.00-------------1.00----------1.00--1.00-----------------------------1.00----
............................................................................................................................................ACAGACAGAGAGGGCTAAGGTA........................................................................................2213.0017.00---------------1.00-------------1.00-----1.00--------------------------
..............................................................................................................................................AGACAGAGAGGGCTAAGGTG........................................................................................2013.003.00-----------2.00--------1.00-----------------------------------------
...........................................................................................................................................CACAGACAGAGAGGGCTAAGGG.........................................................................................222.000.001.001.00------------------------------------------------------------
............................................................................................................................................ACAGACAGAGAGGGCTAAGGTGT.......................................................................................2312.005.00----1.00-----------1.00---------------------------------------------
...........................................................................................................................................CACAGACAGAGAGGGCTAA............................................................................................1912.002.00---------------------1.00----------------------------1.00-----------
............................................................................................................................................ACAGACAGAGAGGGCTAAGGTT........................................................................................2212.0017.00-------1.00--------------1.00---------------------------------------
.............................................................................................................................................CAGACAGAGAGGGCTAAGGTGCC......................................................................................2312.002.00-------------------------1.00-------------------------1.00----------
...........................................................................................................................................CACAGACAGAGAGGGCTAAGGGT........................................................................................232.000.00-2.00------------------------------------------------------------
.............................................................................................................................................................................AGCCCAGCCCTCTTCTGTCT.........................................................2012.002.00-------------------------------------1.00----------------1.00-------
..............................................................................................................................................AGACAGAGAGGGCTAAGGT.........................................................................................1912.002.00-------------1.00------1.00-----------------------------------------
............................................................................................................................................ACAGACAGAGAGGGCTAAGGA.........................................................................................2112.001.00---------------------------------------------1.001.00---------------
...........................................................................................................................................CACAGACAGAGAGGGCTAAGGTGT.......................................................................................2412.001.00--------------1.00-----------------1.00-----------------------------
.............................................................................................................................................CAGACAGAGAGGGCTAAGGTGAC......................................................................................2311.004.00--------------------------------------1.00-----------------------
............................................................................................................................................ACAGACAGAGAGGGCTAAGGTAGA......................................................................................2411.0017.00--------------------------------------------------------1.00-----
..........................................................................................................................................ACACAGACAGAGAGGGCTAAGGATA.......................................................................................251.000.00-----1.00--------------------------------------------------------
.............................................................................................................................................CAGACAGAGAGGGCTAAGGTT........................................................................................2111.001.00-----1.00--------------------------------------------------------
...........................................................................................................................................CACAGACAGAGAGGGCTCTGG..........................................................................................211.000.00-------------1.00------------------------------------------------
.............................................................................................................................................CAGACAGAGAGGGCTAAGG..........................................................................................1911.001.00-------------------------------------------1.00------------------
...........................................................................................................................................CACAGACAGAGAGGGCTAAGGAG........................................................................................231.000.00-1.00------------------------------------------------------------
...........................................................................................................................................CACAGACAGAGAGGGCTAAGGAGC.......................................................................................241.000.00-------------------1.00------------------------------------------
.........................................................................................................................................TACACAGACAGAGAGGGCTAAGGTAT.......................................................................................261.000.00-----1.00--------------------------------------------------------
............................................................................................................................................ACAGACAGAGAGGGCTAAGAAT........................................................................................221.000.00-----------------------1.00--------------------------------------
...........................................................................................................................................CACAGACAGAGAGGGCTAAGGA.........................................................................................221.000.00----------------------1.00---------------------------------------
............................................................................................................................................ACAGACAGAGAGGGCTAAGG..........................................................................................2011.001.00-----1.00--------------------------------------------------------
..............................AACCTCTGGGGAGGGCGGG.........................................................................................................................................................................................................191.000.00-------------------------------------------------1.00------------
..............................................................................................................................................AGACAGAGAGGGCTAAGGTAG.......................................................................................2111.002.00-----------1.00--------------------------------------------------
...........................................................................................................................................CACAGACAGAGAGGGCAAAG...........................................................................................201.000.00----------------1.00---------------------------------------------
................................................................................................................................................................................CCAGCCCTCTTCTGTCTCCCCT....................................................221.000.00-------------------------------------------------------1.00------
.............................................................................................................................................CAGACAGAGAGGGCTAAGGTGA.......................................................................................2211.004.00--------------------------------------------1.00-----------------
.............................................................................................................................................CAGACAGAGAGGGCTAAGGTAGAA.....................................................................................2411.001.00-----------------------1.00--------------------------------------
..........................................................................................................................................ACACAGACAGAGAGGGCTAAGA..........................................................................................221.000.00---1.00----------------------------------------------------------
..................................................................................................................................................................................................................GAGCTCTGGAGTCCCAGAAGC...................2111.001.00---------1.00----------------------------------------------------
.............................................................................................................................................CAGACAGAGAGGGCTAAGGTAT.......................................................................................2211.001.00---------------1.00----------------------------------------------
.............................................................................................................................................CAGACAGAGAGGGCTAAGGTCA.......................................................................................2211.001.00----1.00---------------------------------------------------------
..........................................................................................................................................ACACAGACAGAGAGGGCTAAGGG.........................................................................................231.000.00-------1.00------------------------------------------------------
..............................................................................................................................................AGACAGAGAGGGCTAAGGTGCCT.....................................................................................2311.001.00----1.00---------------------------------------------------------
............................................................................................................................................ACAGACAGAGAGGGCTAAGGTGA.......................................................................................2311.005.00-----------------------------------------------1.00--------------
.............................................................................................................................................CAGACAGAGAGGGCTAAGGTGC.......................................................................................2211.001.00------------------------------------1.00-------------------------
...........................................................................................................................................CACAGACAGAGAGGGCTAAGGTG........................................................................................2311.001.00------------1.00-------------------------------------------------
.............................................................................................................................................CAGACAGAGAGGGCTAAGGT.........................................................................................2011.001.00----------1.00---------------------------------------------------
.............................................................................................................................................................................................................GATCCGAGCTCTGGAGTCCCAGAAG....................2511.001.00-1.00------------------------------------------------------------
.............................................................................................................................................................................AGCCCAGCCCTCTTCTGTCTCC.......................................................2211.001.00---------------------------------1.00----------------------------
.............................................................................................................................................................................AGCCCAGCCCTCTTCTGTCTCCTTT....................................................2511.001.00-----------------------------------------------------1.00--------
..........................................................................................................................................ACACAGACAGAGAGGGC...............................................................................................1711.001.00----------------------------1.00---------------------------------
............................................................................................................................................ACAGACAGAGAGGGCTAAGGGA........................................................................................2211.001.00---1.00----------------------------------------------------------
..............................................................................................................................................AGACAGAGAGGGCTAAGGTGTTT.....................................................................................2311.003.00------1.00-------------------------------------------------------
............................................................................................................................................ACAGACAGAGAGGGCTAAGACG........................................................................................221.000.00----1.00---------------------------------------------------------
.............................................................................................................................................CAGACAGAGAGGGCTAAGGTA........................................................................................2111.001.00---1.00----------------------------------------------------------
............................................................................................................................................................................GAGCCCAGCCCTCTTCTGTCTCT.......................................................231.000.00----------------------------------------1.00---------------------
............................................................................................................................................ACAGACAGAGAGGGCTA.............................................................................................1720.500.50----------0.50---------------------------------------------------
.............................................................................................................................................CAGACAGAGAGGGCTAAG...........................................................................................1820.500.50------------------------------------------------------------0.50-

Antisense strand
TGCCCTTGTGGAGAAAGCAGTTTTCACTGCAACCTCTGGGGAGGGGAGCTCAACCCTGGGTCCCACTTTATCAAGAGTTTGGCTGCATGAGAATCACCCTGAAGCCCAGGCTTTCAACTACAGGGCTAGCCAGCCTGTACACAGACAGAGAGGGCTAAGGTGCCTGAGTGTGGAGCCCAGCCCTCTTCTGTCTCCCACAGTTTCAGATCCGAGCTCTGGAGTCCCAGAAGCGGCAGCAGGAGATGGTCCT
......................................................................................................................................((((....((((((((((((((..(((.((.......)).))).)))))))).))))))...))))..................................................
......................................................................................................................................135..............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM339996(GSM339996)
hues6Neuron. (cell line)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		GSM339994(GSM339994)
hues6. (cell line)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		TAX577580(Rovira)
total RNA. (breast)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR191571(GSM715681)
63genomic small RNA (size selected RNA from t. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189782SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		TAX577745(Rovira)
total RNA. (breast)		SRR040015(GSM532900)
G623T. (cervix)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
......................................................................................................................................................................................................AGTTTCAGATCCGAGCTG.................................. 182.000.00-----------------2.00--------------------------------------------
...............................................................................................................................................GACAGAGAGGGCTAAGGTGCCTGAG.................................................................................. 2511.001.00-------------------------------1.00------------------------------
..................................................................................................................CAACTACAGGGCTAGCCGAGG................................................................................................................... 211.000.00----------------------------------------------------------1.00---
........................................................................................................CCCAGGCTTTCAACTACGA............................................................................................................................... 191.000.00----------------------------------------------------1.00---------
................................................CTCAACCCTGGGTCCCA......................................................................................................................................................................................... 1720.500.50-----------------------------------------------------------0.50--
..............................................................................................................................................................................................TCTCCCACAGTTTCAG............................................ 1650.200.20-------------------------------------------------------------0.20