ID: uc001ajm.6
GENE: PANK4(6)
chr1:2444429-2444678-


(2)
AGO2.ip
(4)
B-CELL
(2)
BRAIN
(1)
BREAST
(9)
CELL-LINE
(1)
HEART
(1)
HELA
(2)
OTHER
(3)
SKIN
(1)
UTERUS
(1)
XRN.ip

Sense strand
TGGGCCTCGTCCTCAGAGCCCCGTGCAGCTGTGCGCTGGCCACTGTCCCGGACCGATAGGCTTGTGCCTGGTGGGGTCCCAGTTGGGCCTGAGTCTTCGATCCTGAGGGGCGTGGTATGGAACAGGCTGCGCCTGGCAGGTGTCCAGGGTGGGCTGAGGCCACGTCTTCACTCAGGCCTGGCATCTGGCACTCTCCACAGGTGAAGCAGCGGGAGAATGGCGTGGCGCTGAGGTGCTTCCCCGGGGTCGT
...........................................................................................................................................(((.(((((....(((.(((((.............)))))))).))))))))...........................................................
...........................................................................................................................................140.........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR189784SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR189782GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
................................................................................................................................................CAGGGTGGGCTGAGGCCACGT.....................................................................................21113.0013.0013.00-----------------------
................................................................................................................................................................................CCTGGCATCTGGCACTCTCCACA...................................................2315.005.00--4.00-----1.00---------------
................................................................................................................................................................................CCTGGCATCTGGCACTCTCCA.....................................................2115.005.00---3.00-1.001.00-----------------
................................................................................................................................................................................CCTGGCATCTGGCACTCTCCACT...................................................2314.001.00-2.00-----------1.00-----1.00----
................................................................................................................................................................................CCTGGCATCTGGCACTCTCCAA....................................................2214.005.00-4.00----------------------
.................................................................................................................................................................................CTGGCATCTGGCACTCTCCAAA...................................................223.000.00-3.00----------------------
..............................................................................................................................................TCCAGGGTGGGCTGAGGCCACGT.....................................................................................2312.002.00-1.00-------1.00--------------
...................................................................................................................TATGGAACAGGCTGCGCA.....................................................................................................................181.000.00----------------1.00-------
................................................................................................................................................................................CCTGGCATCTGGCACTCTCCACC...................................................2311.001.00----------1.00-------------
................................................................................................................................................................................................................GCGGGAGAATGGCGTTTAC.......................191.000.00---------------1.00--------
.................................................................................................................................................................................CTGGCATCTGGCACTCTCCACAG..................................................2311.001.00--------------------1.00---
................................................................................................................................................................................CCTGGCATCTGGCACTCTCCATA...................................................2311.005.00---------------------1.00--
................................................................................................................................................................................CCTGGCATCTGGCACTCTCCAC....................................................2211.001.00--------------1.00---------
..................................................................................................................................................................................TGGCATCTGGCACTCTCCACAG..................................................2211.001.00------------------1.00-----
................................................................................................................................................................................CCTGGCATCTGGCACTCTCCAT....................................................2211.005.00------------1.00-----------
...........................................................................................................................................................................................................AAGCAGCGGGAGAATAAGG............................191.000.00-----------------1.00------
................................................................................................................................................................................CCTGGCATCTGGCACTCTCC......................................................2011.001.00-------1.00----------------
................................................................................................................................................................................................................GCGGGAGAATGGCGTGGCGCTG....................2211.001.00----1.00-------------------
................................................................................................................................................................................CCTGGCATCTGGCACTCTCCACAG..................................................2411.001.00-1.00----------------------
................................................................................................................................................................................CCTGGCATCTGGCACTCTCCAAA...................................................2311.005.00-----------1.00------------
........................................................................................................................................................................................CTGGCACTCTCCACA...................................................1590.440.44-0.44----------------------
..............................................................................................................................................................................................................CAGCGGGAGAATGGC.............................1540.250.25----------------------0.25-
.....................CGTGCAGCTGTGCG.......................................................................................................................................................................................................................1470.140.14-----------------------0.14

Antisense strand
TGGGCCTCGTCCTCAGAGCCCCGTGCAGCTGTGCGCTGGCCACTGTCCCGGACCGATAGGCTTGTGCCTGGTGGGGTCCCAGTTGGGCCTGAGTCTTCGATCCTGAGGGGCGTGGTATGGAACAGGCTGCGCCTGGCAGGTGTCCAGGGTGGGCTGAGGCCACGTCTTCACTCAGGCCTGGCATCTGGCACTCTCCACAGGTGAAGCAGCGGGAGAATGGCGTGGCGCTGAGGTGCTTCCCCGGGGTCGT
...........................................................................................................................................(((.(((((....(((.(((((.............)))))))).))))))))...........................................................
...........................................................................................................................................140.........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR189784SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR189782GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)