ID: hsa-mir-7108
GENE: LMNB2(6)
chr19:2434862-2435048-


(1)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(6)
AGO2.ip 		(1)
AGO3.ip 		(3)
B-CELL 		(4)
BRAIN 		(11)
BREAST 		(39)
CELL-LINE 		(7)
CERVIX 		(1)
FIBROBLAST 		(2)
HELA 		(1)
LIVER 		(1)
OTHER 		(1)
RRP40.ip 		(13)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
AGCAAGTGCGGCTCTACAAGCTGGAGCTGGAGCAGACCTACCAGGCCAAGGTGTGGCCGGCAGGCGGGTGGGCGGGGGCGGCCGGTGGGAACCCCGCCCCGCCCCGCGCCCGCACTCACCCGCCCGTCTCCCCACAGCTGGACAGCGCCAAGCTGAGCTCTGACCAGAACGACAAGGCGGCCAGTGC
...................................................(((((..(((.(((((((((((((((((((..((((((...))))))))))))).)))))......))))))).)))...)))))...................................................
..................................................51....................................................................................137................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189782SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189784SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR189786SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR038857(GSM458540)
D20. (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR189785SRR553576(SRX182782)
source: Testis. (testes)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR189787SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR037941(GSM510479)
293DroshaTN. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		TAX577579(Rovira)
total RNA. (breast)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)		SRR040028(GSM532913)
G026N. (cervix)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040012(GSM532897)
G648N. (cervix)		SRR343334DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR040011(GSM532896)
G529T. (cervix)		SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040035(GSM532920)
G001T. (cervix)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577741(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		TAX577746(Rovira)
total RNA. (breast)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040040(GSM532925)
G612N. (cervix)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR040037(GSM532922)
G243T. (cervix)		TAX577743(Rovira)
total RNA. (breast)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR040031(GSM532916)
G013T. (cervix)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037931(GSM510469)
293GFP. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
..................................................GTGTGGCCGGCAGGCGGGTGG....................................................................................................................21136.0036.0019.00-2.00-2.00---2.00----2.00----1.001.00---1.00---1.00-----2.001.00--------------1.00----------------------------1.00-----------
.....................................................................................................................ACCCGCCCGTCTCCCCACAGT.................................................21120.008.00-2.00--5.00----1.002.00-1.00-------1.00--1.00---1.00-2.00-------1.00---1.00----------------------------1.00--1.00----------------
.....................................................................................................................ACCCGCCCGTCTCCCCACAG..................................................2018.008.00-4.00---2.00-------------------2.00----------------------------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGGGG....................................................................................................................2117.005.001.001.00--1.00-------1.00---------------------1.00---------------------1.00--------------------------1.00------
..................................................GTGTGGCCGGCAGGCGGGTGGG...................................................................................................................2217.007.001.00----2.00-----2.001.00-----------------------------------------------------------1.00-----------------
..................................................GTGTGGCCGGCAGGCGGGTG.....................................................................................................................2017.007.00--2.00--1.00-----2.00------------------------------1.00-----1.00-----------------------------------------
..................................................GTGTGGCCGGCAGGCGGGTGA....................................................................................................................2117.007.00--3.00------3.001.00-------------------------------------------------------------------------------
................................................................................................CCCCGCCCCGCGCCC............................................................................1506.006.00-----------1.00---------2.00------------------------------------1.00-------1.00----1.00------------------
..................................................GTGTGGCCGGCAGGCGGG.......................................................................................................................1815.005.00--------5.00---------------------------------------------------------------------------------
......................................................................................................................CCCGCCCGTCTCCCCACAGTCT...............................................2214.002.00---------------4.00--------------------------------------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGTGGGCGG................................................................................................................2514.004.00--1.003.00--------------------------------------------------------------------------------------
....................................................................................................................................................CAAGCTGAGCTCTGACCAG....................1914.004.004.00-----------------------------------------------------------------------------------------
...................GCTGGAGCTGGAGCAATC......................................................................................................................................................184.000.00----------------4.00-------------------------------------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGTGGAAT.................................................................................................................2414.0036.002.00---2.00-------------------------------------------------------------------------------------
..................AGCTGGAGCTGGAGCAGACCTACCAGGCC............................................................................................................................................2913.003.00-----------------3.00------------------------------------------------------------------------
.......................................................................................................................................................GCTGAGCTCTGACCAGAACGACAAGG..........2613.003.00------3.00-----------------------------------------------------------------------------------
.....................................................................................................................ACCCGCCCGTCTCCCCACAGTAA...............................................2313.008.00-1.00----2.00-----------------------------------------------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGTGGGC..................................................................................................................2312.002.00---1.00---1.00----------------------------------------------------------------------------------
....................................................................................................................CACCCGCCCGTCTCCCCACAG..................................................2112.002.00-1.00-1.00--------------------------------------------------------------------------------------
.....................................................................................................................ACCCGCCCGTCTCCCCACAGA.................................................2112.008.00-1.00---------------------------------1.00------------------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGGGGA...................................................................................................................2212.005.00------------1.00-----------------------1.00-----------------------------------------------------
...................................................TGTGGCCGGCAGGCGGGTGGT...................................................................................................................212.000.00--2.00---------------------------------------------------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGGG.....................................................................................................................2012.005.00-1.00--------------------1.00-------------------------------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGTGTT...................................................................................................................2212.007.00--2.00---------------------------------------------------------------------------------------
......................................................................................................................CCCGCCCGTCTCCCCACAG..................................................1912.002.00---1.00-----------------------1.00--------------------------------------------------------------
.....................................................................................................................ACCCGCCCGTCTCCCCACAGAA................................................2212.008.00----------------------1.00----------------------1.00--------------------------------------------
......................................................................................................................................................AGCTGAGCTCTGACCAGAACGA...............2212.002.00------------------------2.00-----------------------------------------------------------------
..............................................................................................................................................................TCTGACCAGAACGACAAGGC.........2012.002.00-------------------------------2.00----------------------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGCGA....................................................................................................................2112.005.00--1.00------1.00--------------------------------------------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGTGGGCGGGGGC............................................................................................................2912.002.00---1.00-------------1.00------------------------------------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGTGGGCG.................................................................................................................2412.002.00---2.00--------------------------------------------------------------------------------------
.....................................................................................................................................................AAGCTGAGCTCTGACCAGAACGACA.............2512.002.00--------------------------------2.00---------------------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGTGGT...................................................................................................................2212.0036.00--2.00---------------------------------------------------------------------------------------
...............ACAAGCTGGAGCTGGAGCA.........................................................................................................................................................1912.002.00--------------2.00---------------------------------------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGTGGGCGGG...............................................................................................................2612.002.00---2.00--------------------------------------------------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGTGT....................................................................................................................2112.007.00----2.00-------------------------------------------------------------------------------------
.............................................................................................................................................ACAGCGCCAAGCTGAGCT............................1811.001.00--------------1.00---------------------------------------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGTGGTAC.................................................................................................................2411.0036.00-1.00----------------------------------------------------------------------------------------
........................................................................CGGGGGCGGCCGGTGCCC.................................................................................................181.000.00---------------------------------------------------------------------------------1.00--------
....................................................................................................................CACCCGCCCGTCTCCCCACCGT.................................................221.000.00--------------------------------------1.00---------------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGTGAAA..................................................................................................................2311.007.00----------------------------------------------------------------1.00-------------------------
..................................................GTGTGGCCGGCAGGCGGGGGA....................................................................................................................2111.005.00---------1.00--------------------------------------------------------------------------------
........................................................................................................................................................CTGAGCTCTGACCAGAACGACAAGGC.........2611.001.00--------------------------1.00---------------------------------------------------------------
...................................................TGTGGCCGGCAGGCGGGTGGG...................................................................................................................2111.001.001.00-----------------------------------------------------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGTTT....................................................................................................................211.000.00---------------------------------------------------------------1.00--------------------------
................................................................................................................CACTCACCCGCCCGTCTCCCCACAG..................................................2511.001.00-1.00----------------------------------------------------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGTGGGCGGGGGCGAT.........................................................................................................321.000.00------------------------------1.00-----------------------------------------------------------
.......................................................................................................................................................GCTGAGCTCTGACCAGAACG................2011.001.00------1.00-----------------------------------------------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGCG.....................................................................................................................2011.005.00-1.00----------------------------------------------------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGTGGTGG.................................................................................................................2411.0036.00-1.00----------------------------------------------------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGTGGTT..................................................................................................................2311.0036.00----------1.00-------------------------------------------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGTGGTCT.................................................................................................................2411.0036.00-------1.00----------------------------------------------------------------------------------
....................................................................................................................CACCCGCCCGTCTCCCCACAGCA................................................231.000.00-------------------------1.00----------------------------------------------------------------
.................AAGCTGGAGCTGGAGCGA........................................................................................................................................................181.000.00-------------------------------------------------------------1.00----------------------------
....................................................................................................................CACCCGCCCGTCTCCCCACAGA.................................................2211.002.00-----------------------1.00------------------------------------------------------------------
........................................................................................................................CGCCCGTCTCCCCACAGTAA...............................................201.000.00-1.00----------------------------------------------------------------------------------------
........................................................................................................................................................CTGAGCTCTGACCAGAA..................1711.001.00----------------------------------------------------------------------------------1.00-------
..................................................GTGTGGCCGGCAGGCGGGTAGA...................................................................................................................221.000.001.00-----------------------------------------------------------------------------------------
...........................................................................................CCCCGCCCCGCCCCGCGCCCTT..........................................................................221.000.00--------------------------------------------------1.00---------------------------------------
..................................................GTGTGGCCGGCAGGCGGGTTAG...................................................................................................................221.000.00-----------------------------------------------------------1.00------------------------------
.....................................................................................................................ACCCGCCCGTCTCCCCACAGC.................................................2111.001.00-----1.00------------------------------------------------------------------------------------
..............TACAAGCTGGAGCTGGAGCA.........................................................................................................................................................2011.001.00--------------1.00---------------------------------------------------------------------------
.....................................................................................................................ACCCGCCCGTCTCCCCACAGTA................................................2211.008.00-------------------------------------------1.00----------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGTGAGA..................................................................................................................2311.007.00------------------------------------------------------1.00-----------------------------------
..................................................GTGTGGCCGGCAGGCGGGTAGAG..................................................................................................................231.000.00-1.00----------------------------------------------------------------------------------------
...................................................TGTGGCCGGCAGGCGGGTG.....................................................................................................................1911.001.00---1.00--------------------------------------------------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGTAAT...................................................................................................................221.000.00------1.00-----------------------------------------------------------------------------------
....................................................................................................................CACCCGCCCGTCTCCCACAG...................................................201.000.00-1.00----------------------------------------------------------------------------------------
...................................................TGTGGCCGGCAGGCGGGG......................................................................................................................181.000.00--------------------1.00---------------------------------------------------------------------
.........................................................................................................................................................TGAGCTCTGACCAGAACGACAAGGCG........2611.001.00------------------------1.00-----------------------------------------------------------------
..........................................................................................................................................................GAGCTCTGACCAGAACGACAAGGCG........2511.001.00--------------------------------------------------------------------------------1.00---------
..................................................GTGTGGCCGGCAGGCGGGTGGTTTT................................................................................................................2511.0036.00---------------------------------------------------------------------1.00--------------------
.........................................................................................................................................................TGAGCTCTGACCAGAACGACAAGGCGG.......2711.001.00--------------------------1.00---------------------------------------------------------------
......................................................GGCCGGCAGGCGGGTGGG...................................................................................................................1811.001.00---1.00--------------------------------------------------------------------------------------
...............................................................................................................................................................CTGACCAGAACGACAAGGCGGC......2211.001.00---1.00--------------------------------------------------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGTAA....................................................................................................................211.000.00------------------------------------------------------------1.00-----------------------------
......................................................................................................................................................................GAACGACAAGGCGGCCAGTG.2011.001.00-------------1.00----------------------------------------------------------------------------
.........................................................................................AACCCCGCCCCGCCCCGCGCCCGCACT.......................................................................2711.001.00-------1.00----------------------------------------------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGTGGCT..................................................................................................................2311.0036.00-------1.00----------------------------------------------------------------------------------
.....................................................................................................................ACCCGCCCGTCTCCCCACA...................................................1911.001.00----------1.00-------------------------------------------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGTGAA...................................................................................................................2211.007.00-------------------1.00----------------------------------------------------------------------
..............................................................................................................................................................TCTGACCAGAACGACAAGG..........1911.001.00---------------------------------------------------------1.00--------------------------------
..............................................................................................................................................CAGCGCCAAGCTGAGCTCTGAA.......................221.000.00-----------------------------------------------------1.00------------------------------------
...............................................................................................................................................AGCGCCAAGCTGAGCCTGC.........................191.000.00-------------------------------------------------------------------------------1.00----------
..............TACAAGCTGGAGCTGGAGCAGACC.....................................................................................................................................................2411.001.001.00-----------------------------------------------------------------------------------------
..........................................................................................................................................TGGACAGCGCCAAGCTGAGCTCTGACC......................2711.001.00--------------------------1.00---------------------------------------------------------------
..................................................................................................................................................................ACCAGAACGACAAGGC.........1611.001.00--------------------------------------------------------------------1.00---------------------
...................................................TGTGGCCGGCAGGCGGGTGGA...................................................................................................................211.000.00----------------------1.00-------------------------------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGTGGTAT.................................................................................................................2411.0036.00----------1.00-------------------------------------------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGTGGTCC.................................................................................................................2411.0036.00-------1.00----------------------------------------------------------------------------------
.......................................ACCAGGCCAAGGTGTTGG..................................................................................................................................181.000.00-1.00----------------------------------------------------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGTGGGCGGGGGGG...........................................................................................................301.000.00------------------------------1.00-----------------------------------------------------------
..............TACAAGCTGGAGCTGGAGCAGA.......................................................................................................................................................2211.001.00--------------------1.00---------------------------------------------------------------------
............................................................................................CCCGCCCCGCCCCGCGCCCTT..........................................................................211.000.00-------------1.00----------------------------------------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGTATAG..................................................................................................................231.000.00-1.00----------------------------------------------------------------------------------------
......................................................................................................................................................AGCTGAGCTCTGACCAGAACG................2111.001.00------------------1.00-----------------------------------------------------------------------
.....................................................................................................................ACCCGCCCGTCTCCCACAG...................................................191.000.00-----1.00------------------------------------------------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGGGT....................................................................................................................2111.005.00----------------------------1.00-------------------------------------------------------------
............TCTACAAGCTGGAGCTGGAG...........................................................................................................................................................2011.001.00-------------------------------------------------------------------1.00----------------------
.............................................................................................................................................................CTCTGACCAGAACGACAAGGCG........2211.001.00------------------------------------1.00-----------------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGTGGAAC.................................................................................................................2411.0036.001.00-----------------------------------------------------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGTGGTAAC................................................................................................................2511.0036.00-------1.00----------------------------------------------------------------------------------
................................................................................GCCGGTGGGAACCCCGG..........................................................................................171.000.00---------------------------------------------------------------------------1.00--------------
..................................................................................................................................................GCCAAGCTGAGCTCTGACCAGAACGACA.............2811.001.00-------------------------------------1.00----------------------------------------------------
...............................................................GCGGGTGGGCGGGGGCGCTCC.......................................................................................................211.000.00-----1.00------------------------------------------------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGTGGAAA.................................................................................................................2411.0036.00----------------------------------------1.00-------------------------------------------------
......................................................................GGCGGGGGCGGCCGGACCG..................................................................................................191.000.00------------------------------------------------------------------------------------1.00-----
.....................................................................................................................ACCCGCCCGTCTCCCCACAGCT................................................2211.001.00----------------------------1.00-------------------------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGTGACT..................................................................................................................2311.007.00-------1.00----------------------------------------------------------------------------------
................................................................................................................................................................TGACCAGAACGACAAGGCGGCCA....2311.001.00------------------1.00-----------------------------------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGTGGTA..................................................................................................................2311.0036.00-------------------1.00----------------------------------------------------------------------
......................................................................................................................CCCGCCCGTCTCCCCACAGTTT...............................................2211.002.00----------------------------------------------1.00-------------------------------------------
.......................................................................................................................................................GCTGAGCTCTGACCAGAAAA................201.000.00--------------1.00---------------------------------------------------------------------------
......................................................................................................................................................AGCTGAGCTCTGACCAGAA..................1911.001.00------1.00-----------------------------------------------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGTGGA...................................................................................................................2211.0036.00-----------------------------------------------------------------1.00------------------------
..................................................GTGTGGCCGGCAGGCGGGG......................................................................................................................1911.005.00-----1.00------------------------------------------------------------------------------------
..................................................GTGTGGCCGGCAGGCGGGTGGTAAA................................................................................................................2511.0036.00-------------1.00----------------------------------------------------------------------------
............................................................CAGGCGGGTGGGCGGTGA.............................................................................................................181.000.00--------------------------------------------------------------1.00---------------------------
.............................................................................................CCGCCCCGCCCCGCGCCCTCTC........................................................................221.000.00--------------------------------------------------------------------------1.00---------------
..................................................GTGTGGCCGGCAGGCGGGTGGTTT.................................................................................................................2411.0036.00-1.00----------------------------------------------------------------------------------------
.................................................................................................................................................................GACCAGAACGACAAGGCGGC......2011.001.00---1.00--------------------------------------------------------------------------------------
..............TACAAGCTGGAGCTGGAG...........................................................................................................................................................1820.500.50-------------------------------------------------------------------------------------0.50----
..................................................GTGTGGCCGGCAGGCGG........................................................................................................................1720.500.50---0.50--------------------------------------------------------------------------------------
..................AGCTGGAGCTGGAGCAGA.......................................................................................................................................................1840.250.25------------------0.25-----------------------------------------------------------------------
...........................................................................................CCCCGCCCCGCCCCGCGCCCG...........................................................................2140.250.25--------------------------------------------------------------------------------------0.25---
.................................................................................CCGGTGGGAACCCC............................................................................................1450.200.20----------------------------0.20-------------------------------------------------------------
.......................................................GCCGGCAGGCGGGT......................................................................................................................1480.120.12----------------------------------------------------------------------------------------0.12-
.................................................................................................................................................................GACCAGAACGACAA............1490.110.11-----------------------------------------------------------------------------------------0.11

Antisense strand
AGCAAGTGCGGCTCTACAAGCTGGAGCTGGAGCAGACCTACCAGGCCAAGGTGTGGCCGGCAGGCGGGTGGGCGGGGGCGGCCGGTGGGAACCCCGCCCCGCCCCGCGCCCGCACTCACCCGCCCGTCTCCCCACAGCTGGACAGCGCCAAGCTGAGCTCTGACCAGAACGACAAGGCGGCCAGTGC
...................................................(((((..(((.(((((((((((((((((((..((((((...))))))))))))).)))))......))))))).)))...)))))...................................................
..................................................51....................................................................................137................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189782SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189784SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR189786SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR038857(GSM458540)
D20. (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR189785SRR553576(SRX182782)
source: Testis. (testes)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR189787SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR037941(GSM510479)
293DroshaTN. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		TAX577579(Rovira)
total RNA. (breast)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)		SRR040028(GSM532913)
G026N. (cervix)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040012(GSM532897)
G648N. (cervix)		SRR343334DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR040011(GSM532896)
G529T. (cervix)		SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040035(GSM532920)
G001T. (cervix)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577741(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		TAX577746(Rovira)
total RNA. (breast)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040040(GSM532925)
G612N. (cervix)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR040037(GSM532922)
G243T. (cervix)		TAX577743(Rovira)
total RNA. (breast)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR040031(GSM532916)
G013T. (cervix)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037931(GSM510469)
293GFP. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
........................................................................CGGGGGCGGCCGGTGGGG................................................................................................. 183.000.00----------------------------------------------------1.00--1.00---------------------1.00------------
........................................................................CGGGGGCGGCCGGTGGG.................................................................................................. 171.000.00---------------------------------------------------1.00--------------------------------------
.....................................................................................................................ACCCGCCCGTCTCCCCACCTG................................................. 211.000.00-1.00----------------------------------------------------------------------------------------
...........................................................................................CCCCGCCCCGCCCCGCGC.............................................................................. 1801.001.00---------------------1.00--------------------------------------------------------------------
........................................................................CGGGGGCGGCCGGTGGGGGCG.............................................................................................. 211.000.00-----------------------------------1.00------------------------------------------------------
................................................................................................CCCCGCCCCGCGCCCTGGG........................................................................ 1901.000.00----------------------------------------------------------------------------1.00-------------
................................................................................................................CACTCACCCGCCCGTGGCC........................................................ 191.000.00---------------------------------------1.00--------------------------------------------------
................................................................CGGGTGGGCGGGGGCACCC........................................................................................................ 191.000.00------------1.00-----------------------------------------------------------------------------
.........................................................................................................................GCCCGTCTCCCCACAGCTGG.............................................. 2011.001.00-----------------------------------------------1.00------------------------------------------
.............................................................................................CCGCCCCGCCCCGCGTT............................................................................. 171.000.00--------------------------------------------1.00---------------------------------------------
...........................................................................................................................CCGTCTCCCCACAGCTGCT............................................. 191.000.00--1.00---------------------------------------------------------------------------------------
..............................................................................................CGCCCCGCCCCGCGCCCGC.......................................................................... 1970.140.14---------------------------------------------------------------------------------------0.14--