ID: hsa-mir-6844
GENE: TATDN1(5)
chr8:125520706-125520893-


(1)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(3)
AGO2.ip 		(6)
B-CELL 		(41)
BREAST 		(47)
CELL-LINE 		(7)
CERVIX 		(3)
FIBROBLAST 		(7)
HEART 		(9)
HELA 		(3)
LIVER 		(9)
OTHER 		(21)
SKIN 		(2)
XRN.ip

Sense strand
AAAATTACCAATGTTTCTTCATTGTCGAAACTCACATGCTGAATTTTTGGGTGAGTTAAAACCAAAGTCTCATTCAGAACTTAAGAATTTTGTAGAAATCAAGCTATTTGCTAAAAGTTCTTTGTTTTTAATTCACAGACATAATGAAAAGAAATAGAGATCGGTGTGTAGGGGGAGTGGTAAGTATA
..................................................(((((((((((.(((..........(((((((..((.(((....))).)).(((.....)))..)))))))))).)))))))))))....................................................
..................................................51.....................................................................................138................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189783SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189784SRR037935(GSM510473)
293cand3. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR189785RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR189786SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR343335SRR343334SRR037936(GSM510474)
293cand1. (cell line)		SRR029131(GSM416760)
MCF7. (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR191443(GSM715553)
108genomic small RNA (size selected RNA from . (breast)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)		SRR029126(GSM416755)
143B. (cell line)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189787SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR040010(GSM532895)
G529N. (cervix)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)		SRR038858(GSM458541)
MEL202. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040011(GSM532896)
G529T. (cervix)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR191438(GSM715548)
175genomic small RNA (size selected RNA from . (breast)		SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)		SRR029129(GSM416758)
SW480. (cell line)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR191426(GSM715536)
149genomic small RNA (size selected RNA from . (breast)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)		GSM359175(GSM359175)
hela_5_pct. (hela)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191468(GSM715578)
116genomic small RNA (size selected RNA from . (breast)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR191398(GSM715508)
35genomic small RNA (size selected RNA from t. (breast)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR040018(GSM532903)
G701N. (cervix)		SRR191557(GSM715667)
57genomic small RNA (size selected RNA from t. (breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191399(GSM715509)
36genomic small RNA (size selected RNA from t. (breast)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)		SRR037938(GSM510476)
293Red. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191491(GSM715601)
150genomic small RNA (size selected RNA from . (breast)		SRR191536(GSM715646)
183genomic small RNA (size selected RNA from . (breast)		GSM359178(GSM359178)
hela_nucl_t. (hela)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191458(GSM715568)
28genomic small RNA (size selected RNA from t. (breast)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)		GSM532886(GSM532886)
G850T. (cervix)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR191432(GSM715542)
169genomic small RNA (size selected RNA from . (breast)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR040035(GSM532920)
G001T. (cervix)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		SRR191411(GSM715521)
21genomic small RNA (size selected RNA from t. (breast)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		GSM956925PAZD5TAX577745(Rovira)
total RNA. (breast)		SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)		SRR191497(GSM715607)
17genomic small RNA (size selected RNA from t. (breast)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR029130(GSM416759)
DLD2. (cell line)		SRR191413(GSM715523)
28genomic small RNA (size selected RNA from t. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191505(GSM715615)
139genomic small RNA (size selected RNA from . (breast)		SRR191423(GSM715533)
137genomic small RNA (size selected RNA from . (breast)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040015(GSM532900)
G623T. (cervix)		SRR037931(GSM510469)
293GFP. (cell line)		SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
.....................................................................................................................TTCTTTGTTTTTAATTCACAG..................................................2111171.001171.001001.00102.00-20.001.00--1.00-9.00---7.00---1.001.00---3.001.00--2.00-2.00---1.00-1.00-1.00--2.00-------------1.001.00-2.00------1.001.001.00--------------------1.00----1.00----------1.00--------------1.00---1.00-----------------1.001.001.00-----------
.....................................................................................................................TTCTTTGTTTTTAATTCACAGA.................................................221755.00755.00414.0030.0086.0014.0014.00-20.0016.0012.005.0014.009.008.004.00-1.0012.002.00-1.003.00-2.006.00-6.00-2.001.001.002.002.00-2.001.001.002.001.001.00--3.00-2.001.001.00--1.001.001.002.00-1.001.001.00-2.002.002.001.002.002.00-1.001.001.00-1.00-2.00-1.001.00-1.00-1.001.00-1.001.00-1.00-1.00-1.001.00----1.001.00--1.00-1.00-1.00-1.00-1.00----1.00-1.001.00-1.00----1.00---1.00--1.00-----1.00-1.001.00----------------
.....................................................................................................................TTCTTTGTTTTTAATTCACAGT.................................................221303.001171.00222.0016.00-4.005.004.003.002.00-2.00-4.00-1.00---2.00-1.003.00-1.00------3.003.002.001.00-2.00--1.001.00----1.00-1.00--1.00-----------1.00--1.00-------1.00--1.00----1.00--1.00-------1.00-------------1.00----1.00-1.00--1.00--------1.00-1.00---1.001.00-------1.00----1.00---------
.....................................................................................................................TTCTTTGTTTTTAATTCACA...................................................20194.0094.0081.001.00-1.00-1.00--------------1.00-----3.00-1.00------1.001.001.00--------------------------------------------------------------------1.00-------------------------1.00--------------------
.................................................................................TAAGAATTTTGTAGAAATCAAGC....................................................................................23134.0034.00-----18.00--4.00--------3.00-2.00-2.00------------------3.00-----2.00----------------------------------------------------------------------------------------------------------
.....................................................................................................................TTCTTTGTTTTTAATTCACAGC.................................................22126.001171.0010.00--2.00-----------11.00-------------------1.00-------------1.00------------------1.00------------------------------------------------------------------------------------
.....................................................................................................................TTCTTTGTTTTTAATTCACAA..................................................21119.0094.0017.002.00-------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................GTTCTTTGTTTTTAATTCACAG..................................................22117.0017.0014.00-------1.00-----1.00------------1.00-----------------------------------------------------------------------------------------------------------------------------
....................................................................................................................GTTCTTTGTTTTTAATTCACAGA.................................................23112.0012.003.00-8.00-----------------------------------------1.00------------------------------------------------------------------------------------------------------------
.....................................................................................................................TTCTTTGTTTTTAATTCACAT..................................................21111.0094.0010.00-----------------------------------------------------------------------------------1.00--------------------------------------------------------------------
..................................................GTGAGTTAAAACCAAAGTCTCATTCAGAACTTAAGAATTTTGTAGAAATCAAGCT...................................................................................55111.0011.00------------------10.00-------------------------------------------------------------------------------------------------1.00------------------------------------
.....................................................................................................................TTCTTTGTTTTTAATTCACATA.................................................2218.0094.004.00-1.00-1.00--------1.00---------------1.00---------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TTCTTTGTTTTTAATTCACAGCATC..............................................2517.001171.00------------------------7.00--------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TTCTTTGTTTTTAATTCACAGAG................................................2316.00755.00---------------------5.00----------------------------------------------------------------------------------------------------------------1.00------------------
..................................................GTGAGTTAAAACCAAAGT........................................................................................................................1816.006.00------------4.00-------------------------------------1.00-----------------------------------------------------------------------------1.00------------------------
.....................................................................................................................TTCTTTGTTTTTAATTCCCAG..................................................213.000.003.00--------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................GTTCTTTGTTTTTAATTCACA...................................................2113.003.002.00------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
.................................................................................TAAGAATTTTGTAGAAATCAAGCTATTTGCTAAAAG.......................................................................3613.003.00----------------------------------------------------1.00--------------2.00-------------------------------------------------------------------------------------
......................................................................................................................TCTTTGTTTTTAATTCACAG..................................................2013.003.002.00---------------------1.00----------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TTCTTTGTTTTTAATTCAC....................................................1923.003.001.50--0.50---------------0.50------------------------------------------------------------------------------------------------------------------------------0.50------
..................................................GTGAGTTAAAACCAAAGTCTC.....................................................................................................................2113.003.00--------------------------------------------1.00---------------------------------------------------1.00---------------------------------------------1.00----------
.....................................................................................................................TTCTTTGTTTTTAATTCACAGG.................................................2212.001171.002.00--------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................TCTTTGTTTTTAATTCACAGT.................................................2112.003.00--------------------2.00------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................GAAATAGAGATCGGTGTGTAGGGGGAGTGGTGC.....332.000.00--------------2.00------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TTCTTTGTTTTTAATTCATAG..................................................2152.000.401.800.20-------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TTCTTTGTTTTTAATTCACACA.................................................2212.0094.002.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TTCTTTGTTTTTAATTCACAGTA................................................2312.001171.001.00--------------------------------------------1.00-----------------------------------------------------------------------------------------------------------
....................................................................................................................GTTCTTTGTTTTTAATTCACAGT.................................................2312.0017.001.00---1.00----------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................GTTCTTTGTTTTTAATTCACAC..................................................2212.003.002.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................CGGTGTGTAGGGGGAGTGGT.......2012.002.00--------------2.00------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TTCTTTGTTTTTAATTCACAGACA...............................................2412.002.00-------2.00-------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................AGAGATCGGTGTGTAGGGGGAGTGG........2512.002.00--------------2.00------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................AAATAGAGATCGGTGTGTAGGG...............2212.002.00-------------------1.00------------1.00------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................CGGTGTGTAGGGGGACCAG........1922.000.50--------------------------------------------------------------------------------------------1.00-------------------------1.00----------------------------------
.....................................................................................................................TTCTTTGTTTTTAATTCACAC..................................................2112.0094.002.00--------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTTAAAACCAAAGTCTCATTCA................................................................................................................2612.002.00-----------------------------------------------------------------------------------------1.00------------------1.00--------------------------------------------
........................................................................................................................TTTGTTTTTAATTCACAG..................................................1831.331.331.00----------------0.33---------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TTCTTTGTTTTTAATTCGTA...................................................201.000.001.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................CTTTGTTTTTAATTCACAGA.................................................2011.001.00--------------------------------1.00------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................AGAGATCGGTGTGTAGGGGG.............2011.001.00------------------------------------------1.00--------------------------------------------------------------------------------------------------------------
....................................................................................................................GTTCTTTGTTTTTAATCTCG....................................................201.000.00-----------------------------------------------------------------------------------------------------------------------1.00---------------------------------
.....................................................................................................................TTCTTTGTTTTTAATTCATAGA.................................................2251.000.400.400.20-----------------------0.20----------------------------------------------------------------------------------------------------------------------0.20--------
.................................................................................................................................................................CGGTGTGTAGGGGGAGTGGTGCA....2311.002.00--------------1.00------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................AGAACTTAAGAATTTTGTAGAAATCAAGC....................................................................................2911.001.00-----------------1.00---------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TTCTTTGTTTTTAATTCTTG...................................................201.000.001.00--------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTTAAAACCAAAGTCTCATTCAGA..............................................................................................................2811.001.00----1.00----------------------------------------------------------------------------------------------------------------------------------------------------
..............................CTCACATGCTGAATTTTTGT..........................................................................................................................................201.000.00-----------------------------------------------------------------------------------------------------------------------------------1.00---------------------
...........................................TTTTTGGGTGAGTTAAAAAA.............................................................................................................................201.000.00------------------------------------------------------------------1.00--------------------------------------------------------------------------------------
........................................................................................................................................................AATAGAGATCGGTGTGTAGGGGGAGTGGTGCA....321.000.00--------------1.00------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................CAGAACTTAAGAATTCTG................................................................................................181.000.00-------------------------------------------------------1.00-------------------------------------------------------------------------------------------------
........................................................................................................................................................AATAGAGATCGGTGTGTAGG................2011.001.00------------------------------------------1.00--------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................GATCGGTGTGTAGGGGGA............1811.001.00------------------------------------------1.00--------------------------------------------------------------------------------------------------------------
..................................................................................AAGAATTTTGTAGAAATCAAGCT...................................................................................2311.001.00---------------------------------1.00-----------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................ATAGAGATCGGTGTGTAGG................1911.001.00---------------------------------1.00-----------------------------------------------------------------------------------------------------------------------
.......................................................................................................................CTTTGTTTTTAATTCACAG..................................................1911.001.001.00--------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................TTCAGAACTTAAGAATTTTGTA..............................................................................................2211.001.00--------------------------------------------------------------------------------------------------1.00------------------------------------------------------
......................................................................................................................TCTTTGTTTTTAATTCACAGA.................................................2111.001.00-----------------------------------------------------------------------------------------------------------1.00---------------------------------------------
.......................................................................................TTTTGTAGAAATCAAGCTATTTGCTAAAAG.......................................................................3011.001.00-----------------1.00---------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................GTTCTTTGTTTTTAATTCACATT.................................................2311.003.00----1.00----------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TTCTTTGTTTTTAATTTACA...................................................201.000.001.00--------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTTAAAACCAAAGTCTCA....................................................................................................................2211.001.00--------------------------1.00------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................AAATAGAGATCGGTGTGTAGGGGGAGTGGTGCAT...341.000.00----------------------------------------------------1.00----------------------------------------------------------------------------------------------------
......................................................................................ATTTTGTAGAAATCAAGCTATTTGCTAAA.........................................................................2911.001.00-------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TTCTTTGTTTTTAATTCTCAG..................................................211.000.001.00--------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTTAAAACCAAAGTCTCATT..................................................................................................................2411.001.00-------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
.................................................................................TAAGAATTTTGTAGAAATCAAGCT...................................................................................2411.001.00----------------------------------------------------------------------------1.00----------------------------------------------------------------------------
...................................................................................AGAATTTTGTAGAAATCAAG.....................................................................................2011.001.00------------1.00--------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TTCTTTGTTTTTAATTCACAGATC...............................................2411.00755.001.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TTCTTTGTTTTTAATTCTCA...................................................201.000.001.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................AGAAATAGAGATCGGTGTGTAGGGGG.............2611.001.00---------------------------------------1.00-----------------------------------------------------------------------------------------------------------------
.............................................................................................................................................TAATGAAAAGAAATAGAGATCGG........................2311.001.00-----------------------------------------------------------------------------------------------1.00---------------------------------------------------------
......................................................................................ATTTTGTAGAAATCAAGCT...................................................................................1911.001.00-------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TTCTTTGTTTTTAATTCACAAT.................................................2211.0094.00--------------------------------------1.00------------------------------------------------------------------------------------------------------------------
....................................................................................................................GTTCTTTGTTTTTAATTCACCG..................................................221.000.001.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TTCTTTGTTTTTAATTCACGG..................................................2121.003.001.00--------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................GAGATCGGTGTGTAGGGGGAGTGGTGC.....271.000.00--------------1.00------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................AAAAGAAATAGAGATCGGA.......................191.000.00---------------------------------------------------------------------1.00-----------------------------------------------------------------------------------
..............................................................................................................................................AATGAAAAGAAATAGACGT...........................191.000.00-----------------------------------1.00---------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................AATAGAGATCGGTGTGTAGGG...............2111.001.00--------------------------------------------------------------------------------------------------------------------------1.00------------------------------
........................................................................................................................................................AATAGAGATCGGTGTGTAGGGGGAGTGG........2811.001.00--------------1.00------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................AATAGAGATCGGTGTGTAGGGGGAGTGGCAAG....3211.001.00-----------------------------------------------1.00---------------------------------------------------------------------------------------------------------
............................................................................................................................................................GAGATCGGTGTGTAGGGGGAGT..........2211.001.00------------------------------------------------------------------------------------------------------------------------------1.00--------------------------
..................................................................................AAGAATTTTGTAGAAATCAAGC....................................................................................2211.001.00----------------------------------------------------------------------------------------------------1.00----------------------------------------------------
...........................................................................................................................................................AGAGATCGGTGTGTAGGGGGAGTGGCG......2711.002.00-----------------------------------------------1.00---------------------------------------------------------------------------------------------------------
...........................................................................................................................................................AGAGATCGGTGTGTAGGGGGA............2111.001.00--------1.00------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TTCTTTGTTTTTAATTCGCAG..................................................211.000.001.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TTCTTTGTTTTTAATTCACTGG.................................................2220.503.000.50--------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TTCTTTGTTTTTAATTCACCGA.................................................2220.503.00------------------------------------------------------------------------------------------------------------------------------------------------------0.50--
.........................................................................................................................................................ATAGAGATCGGTGTGTAG.................1820.500.50--------------0.50------------------------------------------------------------------------------------------------------------------------------------------
..............TTCTTCATTGTCGAAACTCACATG......................................................................................................................................................2420.500.50-------------------------------------------------------------------------------------------------------------------------------------------------0.50-------
.......................GTCGAAACTCACATGCTGAATTTTTG...........................................................................................................................................2620.500.50--------0.50------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TTCTTTGTTTTTAATTCACCG..................................................2120.503.000.50--------------------------------------------------------------------------------------------------------------------------------------------------------
..........................GAAACTCACATGCTGAATTTTTGG..........................................................................................................................................2420.500.50-----------------------------------------------------------------------0.50---------------------------------------------------------------------------------
..................................................................................................................................................AAAAGAAATAGAGATCGGTG......................2020.500.50-----------------------------------------------------------------------------------------------------------------------------------------------------0.50---
.....................................................................................................................................................AGAAATAGAGATCGGTGTG....................1920.500.50---------------------------------------------------------------------------------------------------------------------------------------------------0.50-----
.......................GTCGAAACTCACATGCTGAA.................................................................................................................................................2020.500.50---------------------------------------------------------------------0.50-----------------------------------------------------------------------------------
.................................................................................................................................................................CGGTGTGTAGGGGGA............1520.500.50-----------------0.50---------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TTCTTTGTTTTTAATTCACTGA.................................................2220.503.000.50--------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TTCTTTGTTTTTAATTCACGTT.................................................2220.503.000.50--------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................TTTGTTTTTAATTCACAGA.................................................1920.500.50---------------------------0.50-----------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................AATAGAGATCGGTGTGTA..................1820.500.50---------------------------------------------------------------------0.50-----------------------------------------------------------------------------------
.....................................................................................................................TTCTTTGTTTTTAATTCACCGC.................................................2220.503.000.50--------------------------------------------------------------------------------------------------------------------------------------------------------
...........TGTTTCTTCATTGTCGAAACTC...........................................................................................................................................................2220.500.50-------------------------------------------------------------------------------------------------------------------------------------------------------0.50-
..............TTCTTCATTGTCGAAACTCACATGCTGA..................................................................................................................................................2820.500.50----------------------------------------------0.50----------------------------------------------------------------------------------------------------------
.....................................................................................................................TTCTTTGTTTTTAATTCACGGA.................................................2220.503.000.50--------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................CTTAAGAATTTTGTAGAAA..........................................................................................1920.500.50------------------------------------------------------------------------0.50--------------------------------------------------------------------------------
......................................................................................................................................................GAAATAGAGATCGGTGTGTAG.................2120.500.50--------------0.50------------------------------------------------------------------------------------------------------------------------------------------
.........................CGAAACTCACATGCTGAA.................................................................................................................................................1820.500.50----------------------------------------------------------------------------------------------------------------------------------------------------0.50----
.....................................................................................................................TTCTTTGTTTTTAATTCA.....................................................1850.400.400.20-------------------------0.20------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TTCTTTGTTTTTAATTCAAAGA.................................................2250.400.400.40--------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TTCTTTGTTTTTAATTCAAAG..................................................2150.400.400.200.20-------------------------------------------------------------------------------------------------------------------------------------------------------
.................................ACATGCTGAATTTTTGG..........................................................................................................................................1730.330.33-------------------------------------------------------------------------0.33-------------------------------------------------------------------------------
...............................................................................CTTAAGAATTTTGTAGAA...........................................................................................1830.330.33------------------------------------------------------------------------------------------------------------------------------------------------0.33--------
.........................................................................................................................TTGTTTTTAATTCACAGA.................................................1830.330.33-------------------------------------0.33-------------------------------------------------------------------------------------------------------------------
..................................CATGCTGAATTTTTGG..........................................................................................................................................1640.250.25-----------------0.25---------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TTCTTTGTTTTTAATTCATTG..................................................2150.200.400.20--------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TTCTTTGTTTTTAATTCATAGT.................................................2250.200.400.20--------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TTCTTTGTTTTTAATTCAAAT..................................................2150.200.400.20--------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................TGTTTTTAATTCACAGA.................................................1790.110.110.11--------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................CATTCAGAACTTAAG.......................................................................................................15100.100.10--------------------------------------------------------------------------------------------------------------------------------------------------------0.10
.......................................................................................TTTTGTAGAAATCAAG.....................................................................................16100.100.10-----------------------------------------------0.10---------------------------------------------------------------------------------------------------------

Antisense strand
AAAATTACCAATGTTTCTTCATTGTCGAAACTCACATGCTGAATTTTTGGGTGAGTTAAAACCAAAGTCTCATTCAGAACTTAAGAATTTTGTAGAAATCAAGCTATTTGCTAAAAGTTCTTTGTTTTTAATTCACAGACATAATGAAAAGAAATAGAGATCGGTGTGTAGGGGGAGTGGTAAGTATA
..................................................(((((((((((.(((..........(((((((..((.(((....))).)).(((.....)))..)))))))))).)))))))))))....................................................
..................................................51.....................................................................................138................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189783SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189784SRR037935(GSM510473)
293cand3. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR189785RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR189786SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR343335SRR343334SRR037936(GSM510474)
293cand1. (cell line)		SRR029131(GSM416760)
MCF7. (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR191443(GSM715553)
108genomic small RNA (size selected RNA from . (breast)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)		SRR029126(GSM416755)
143B. (cell line)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189787SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR040010(GSM532895)
G529N. (cervix)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)		SRR038858(GSM458541)
MEL202. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040011(GSM532896)
G529T. (cervix)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR191438(GSM715548)
175genomic small RNA (size selected RNA from . (breast)		SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)		SRR029129(GSM416758)
SW480. (cell line)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR191426(GSM715536)
149genomic small RNA (size selected RNA from . (breast)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)		GSM359175(GSM359175)
hela_5_pct. (hela)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191468(GSM715578)
116genomic small RNA (size selected RNA from . (breast)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR191398(GSM715508)
35genomic small RNA (size selected RNA from t. (breast)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR040018(GSM532903)
G701N. (cervix)		SRR191557(GSM715667)
57genomic small RNA (size selected RNA from t. (breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191399(GSM715509)
36genomic small RNA (size selected RNA from t. (breast)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)		SRR037938(GSM510476)
293Red. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191491(GSM715601)
150genomic small RNA (size selected RNA from . (breast)		SRR191536(GSM715646)
183genomic small RNA (size selected RNA from . (breast)		GSM359178(GSM359178)
hela_nucl_t. (hela)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191458(GSM715568)
28genomic small RNA (size selected RNA from t. (breast)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)		GSM532886(GSM532886)
G850T. (cervix)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR191432(GSM715542)
169genomic small RNA (size selected RNA from . (breast)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR040035(GSM532920)
G001T. (cervix)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		SRR191411(GSM715521)
21genomic small RNA (size selected RNA from t. (breast)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		GSM956925PAZD5TAX577745(Rovira)
total RNA. (breast)		SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)		SRR191497(GSM715607)
17genomic small RNA (size selected RNA from t. (breast)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR029130(GSM416759)
DLD2. (cell line)		SRR191413(GSM715523)
28genomic small RNA (size selected RNA from t. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191505(GSM715615)
139genomic small RNA (size selected RNA from . (breast)		SRR191423(GSM715533)
137genomic small RNA (size selected RNA from . (breast)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040015(GSM532900)
G623T. (cervix)		SRR037931(GSM510469)
293GFP. (cell line)		SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
................................................................................TTAAGAATTTTGTAGCG........................................................................................... 173.000.00---------------------------2.001.00----------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................TGAAAAGAAATAGAGATAAC........................ 201.000.00---1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................GGGAGTGGTAAGTATAT 171.000.00-----------------------------------------------------------------------------------------------------------------------------------------1.00---------------