ID: hsa-mir-6781
GENE: BECN1(10)
chr17:40975848-40976200-


(1)
AGO1.ip OTHER.mut 		(2)
AGO2.ip 		(5)
B-CELL 		(2)
BRAIN 		(10)
BREAST 		(38)
CELL-LINE 		(3)
FIBROBLAST 		(6)
HEART 		(3)
HELA 		(3)
LIVER 		(4)
OTHER 		(1)
RRP40.ip 		(36)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
CTTGGGTGACGGGCTCCGGGCTCCCGAGGTGAAGAGCATCGGGGGCTGAGGTGGGACCTTAGAAGGGAGTCTGGGAACCCTCACGGCTCTTATTGGAGTCCCTTCCCTGACCCTGGGCTCTAAACTGCCTTTGCTCAGGCTGTCCCGGAAGCAGGTCCTCCCCGTATCATACCATTCCTAGAGGGAACGGCGCAGGTTGGGACTTCCCTCCCTTTACCATCGTCACCAAGGCATGTGGTAACCCCGGGCCGGAGGTCAAGGGCGTCGCTTCTCCCTAATGTTGCCTCTTTTCCACGGCCTCAGGGATGGAAGGGTCTAAGACGTCCAACAACAGCACCATGCAGGTGAGCTTC
.....................................................................................................................................................................................................................................................((((((..((..(((((.((.((...........)).)))))))..)).)))))).....................................................
...............................................................................................................................................................................................................................................240............................................................303................................................
SizePerfect hitTotal NormPerfect NormRoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR038857(GSM458540)
D20. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189782SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR029124(GSM416753)
HeLa. (hela)		SRR038861(GSM458544)
MM466. (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR038860(GSM458543)
MM426. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189786SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR038859(GSM458542)
MM386. (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR029130(GSM416759)
DLD2. (cell line)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038856(GSM458539)
D11. (cell line)		SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577741(Rovira)
total RNA. (breast)		SRR029126(GSM416755)
143B. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR191563(GSM715673)
83genomic small RNA (size selected RNA from t. (breast)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR038863(GSM458546)
MM603. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR037937(GSM510475)
293cand2. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		TAX577738(Rovira)
total RNA. (breast)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR189787SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
.........................................................................................................................................................................................................................................................................................TGCCTCTTTTCCACGGCCTCAGT.................................................23119.007.00-4.00--1.001.00-1.002.00---2.00-----------------1.00-------1.00-----------1.00----------------------------1.00-----1.00-------1.00-1.00--1.00-------------
.........................................................................................................................................................................................................................................................................................TGCCTCTTTTCCACGGCCTCAT..................................................2219.004.00-------------------1.00-1.00----------------1.00-2.00--------------------1.00------------------1.00---1.00------------------1.00--------
.........................................................................................................................................................................................................................................................................................TGCCTCTTTTCCACGGCCTCAG..................................................2217.007.00-1.00-----2.00----1.00-----------------1.00--1.00-------------------1.00----------------------------------------------------------
.........................................................................................................................................................................................................................................................................................TGCCTCTTTTCCACGGCCTCAGA.................................................2317.007.00---4.00--1.00-----------------------------------1.00-------------------1.00-------------------------------------------------
....................................................................................................................................................................................................................................................CGGGCCGGAGGTCAAGGGCGT........................................................................................2116.006.00------------------------2.00-------1.00--------1.00-----------------------------------1.00------------------1.00---------------
....................................................................................................................................................................................................................................................CGGGCCGGAGGTCAAGGGCGTCGC.....................................................................................2416.006.00-1.00-----------2.00-------------1.00-------1.00----------------------1.00-----------------------------------------------------
....................................................................................................................................................................................................................................................CGGGCCGGAGGTCAAGGGCGTCG......................................................................................2316.006.00-----------------1.00-1.001.00----1.00---------------------------------------1.00------------------------1.00---------------------
.....................................................................................................................................................................................................................................................................................................................................CAACAACAGCACCATGCAGGTGA.....2315.005.00---------------------2.00---------------------1.00--------1.00----------------------------------1.00------------------------
................................................................................................................................................................................................................................................................................................TTTCCACGGCCTCAGAA................................................174.000.00-----4.00----------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................TGCCTCTTTTCCACGGCCTCA...................................................2114.004.00-1.00--1.00------------------------------------1.00------------------1.00---------------------------------------------------
....................................................................................................................................................................................................................................................CGGGCCGGAGGTCAAGGGCGTC.......................................................................................2214.004.00-----------------2.00--------------------------1.00---------1.00---------------------------------------------------------
........................................................................................................................................................................................................................................................................................TTGCCTCTTTTCCACGGCCTCAGT.................................................2414.001.00----1.00----------------------------------1.00-------1.00-------------------------------------------1.00--------------------
........................................................................................................................................................................................................................................ATGTGGTAACCCCGGGCCGGAGG..................................................................................................2313.003.00---------3.00------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................CGGGCCGGAGGTCAAGGGCGTCGCA....................................................................................2513.006.00-----------------------1.00----------1.00----------------------1.00------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................CCAACAACAGCACCATGCAGGTGA.....2413.003.00-------1.00--------------------------------------------------------1.00-------------------------------------1.00---------
........................................................................................................................................................................................................................................................................................................................GGTCTAAGACGTCCAACAACAGCACCATGCAGGTGA.....3613.003.003.00---------------------------------------------------------------------------------------------------------------
.............................TGAAGAGCATCGGGGGCTGAGGG.............................................................................................................................................................................................................................................................................................................233.000.00---3.00------------------------------------------------------------------------------------------------------------
.......GACGGGCTCCGGGCTCCCGAGG....................................................................................................................................................................................................................................................................................................................................2212.002.00--2.00-------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................TGCCTCTTTTCCACGGCCT.....................................................1912.002.001.00------------------------------1.00--------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................TGCCTCTTTTCCACGGCCTCATT.................................................2312.004.00--------------------------------------------------------1.00---------------1.00---------------------------------------
....................................................................................................................................................................................................................................................CGGGCCGGAGGTCAAGGGCGAAA......................................................................................2312.002.00---------------2.00------------------------------------------------------------------------------------------------
.........................................................................................................................................................................TACCATTCCTAGAGGGAACG....................................................................................................................................................................2012.002.00-----------------------------2.00----------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................CGGGCCGGAGGTCAAGGGC..........................................................................................1912.002.002.00---------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................GTCCAACAACAGCACCATGCAGGTGAGCT..2912.002.00--------------2.00-------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................ACAACAGCACCATGCAGGTGA.....2112.002.00----------1.00--------------------------------------1.00--------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................ACAGCACCATGCAGGTGA.....1812.002.00----------1.00--------------------------1.00--------------------------------------------------------------------------
....GGTGACGGGCTCCGGGCTCCCGAGGG...................................................................................................................................................................................................................................................................................................................................262.000.00------------------------------------2.00---------------------------------------------------------------------------
....................................................................................................................................................................................................................................................CGGGCCGGAGGTCAAGGGCG.........................................................................................2012.002.00-----------1.00---1.00------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................CGGGCCGGAGGTCAAGGGCGTCGAA....................................................................................2511.006.00--------------------------------------------------------------------------1.00-------------------------------------
.......................................................................................................................................................................................................................ACCATCGTCACCAAGGC.........................................................................................................................1711.001.00---------------------------------1.00------------------------------------------------------------------------------
..............................................................................................................CCCTGGGCTCTAAACTCTG................................................................................................................................................................................................................................191.000.00------------------------------------------------1.00---------------------------------------------------------------
...................................................................................................................................................................................................................................................CCGGGCCGGAGGTCAAGGGCGTCAT.....................................................................................251.000.00--------------------------------1.00-------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................CGGGCCGGAGGTCAAGGGCGGCA......................................................................................2311.002.00--------------------------1.00-------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................CGGGCCGGAGGTCAAGGGCGTCGCTT...................................................................................2611.001.00--------------------------------------------------------------------------------------------------------1.00-------
..............................................................................................................................................................................................................................................................................................CTTTTCCACGGCCTCAT..................................................171.000.00-----------------------------------------------------------1.00----------------------------------------------------
....................................................................................................................................................................................................................................................CGGGCCGGAGGTCAAGGGCGTCGTT....................................................................................2511.006.00----------------------1.00-----------------------------------------------------------------------------------------
...................GCTCCCGAGGTGAAGAGCATC.........................................................................................................................................................................................................................................................................................................................2111.001.00-----------1.00----------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................TGCCTCTTTTCCACGGCCTCAAA.................................................2311.004.00---------------------------1.00------------------------------------------------------------------------------------
.............................TGAAGAGCATCGGGGGCTGAGGTGGGACCC......................................................................................................................................................................................................................................................................................................301.000.00--1.00-------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................ACCAAGGCATGTGGTCAGG..............................................................................................................191.000.00--------------1.00-------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................CGGGCCGGAGGTCAAGGG...........................................................................................1811.001.00-------------------------------------------------------1.00--------------------------------------------------------
.....................................................................................................................................................................................AGGGAACGGCGCAGGTTGGGCCA.....................................................................................................................................................231.000.00--------------------------------------------------------------------------------------1.00-------------------------
.........................................................................................................................................................................................................................................................................................TGCCTCTTTTCCACGGCCTCAGTT................................................2411.007.00----1.00-----------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................CCCGGGCCGGAGGTCAAGGG...........................................................................................2011.001.00----------------1.00-----------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................AGGCATGTGGTAACCCCGGG.........................................................................................................2011.001.00---------------------------------------------------------------------------------------------------1.00------------
.................................................................................................................................TTTGCTCAGGCTGTCCCGGAAGC.........................................................................................................................................................................................................2311.001.00-----------------------------------1.00----------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................TGCCTCTTTTCCACGGCCTTAGT.................................................2311.002.00----------------------------------------------------------------------------------1.00-----------------------------
...........................................................................................................................................................................................................................................................................................................................................CAGCACCATGCAGGTGA.....1721.001.00----------1.00-----------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................CGGGCCGGAGGTCAAGGGCGGCG......................................................................................2311.002.00--------1.00-------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................CTAAGACGTCCAACAACAGCACCATGCAGGTGA.....3311.001.001.00---------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................CGGGCCGGAGGTCAAGGGCGTCGT.....................................................................................2411.006.00-----------------------1.00----------------------------------------------------------------------------------------
............................GTGAAGAGCATCGGGGG....................................................................................................................................................................................................................................................................................................................1711.001.00---------------------------------------1.00------------------------------------------------------------------------
...................................................................................................................................................................................................................................................CCGGGCCGGAGGTCAAGGGCGTCGC.....................................................................................2511.001.00----------------------------1.00-----------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................CGGGCCGGAGGTCAAGGGCGTT.......................................................................................2211.006.00--------------------------1.00-------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................TTGCCTCTTTTCCACGGCCTCC...................................................221.000.00--------------------1.00-------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................CCCGGGCCGGAGGTCAAGG............................................................................................1911.001.00----------------------------------------------1.00-----------------------------------------------------------------
........................................................................................................................................................................................................................................................................................TTGCCTCTTTTCCACGGCCTCAG..................................................2311.001.00-------------------------------------1.00--------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................TTGCCTCTTTTCCACGGCCTAT...................................................221.000.00--------------------1.00-------------------------------------------------------------------------------------------
...................................................................................................................................................GAAGCAGGTCCTCCCCTTCT..........................................................................................................................................................................................201.000.00---------------------------------------------------------------------1.00------------------------------------------
................................AGAGCATCGGGGGCTGAGGTGGGACCCTAG...................................................................................................................................................................................................................................................................................................301.000.00--1.00-------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................GGGCCGGAGGTCAAGGGCGTCGCT....................................................................................2411.001.00----------------------------------------------------------------------------------------------------1.00-----------
....................................................................................................................................................................................................................................................CGGGCCGGAGGTCAAGGGCGTCGCC....................................................................................2511.006.00----------------------------------1.00-----------------------------------------------------------------------------
....................................................................................................................................................................................................................................................CGGGCCGGAGGTCAAGG............................................................................................1711.001.00-----------------------------------------------------------------------------------1.00----------------------------
......................................................................................................................................................................................................................................................................................................................................AACAACAGCACCATGCAGGTGA.....2211.001.00--------------------------------------------------------------------------------------------1.00-------------------
........ACGGGCTCCGGGCTCCCGAGGCG..................................................................................................................................................................................................................................................................................................................................231.000.00--1.00-------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................TGCCTCTTTTCCACGGCCTCAGAC................................................2411.007.00--------------------------------------------------------------------1.00-------------------------------------------
....................................................................................................................................................................................................................................................CGGGCCGGAGGTCAAGGGCGTCC......................................................................................2311.004.00----------------------------------------------------------------------------------------1.00-----------------------
....GGTGACGGGCTCCGGGCTCCCGAGGTGAAGA..............................................................................................................................................................................................................................................................................................................................3111.001.001.00---------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................CGGGCCGGAGGTCAAGGGCGTCGTATT..................................................................................2711.006.00----------------1.00-----------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................CGGGCCGGAGGTCAAGGGCGTCATC....................................................................................2511.004.00----------------------1.00-----------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................TGCCTCTTTTCCACGGCCTC....................................................2011.001.00-------------------------------1.00--------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................CCGGGCCGGAGGTCAAGGGCGTCGT.....................................................................................251.000.00--------1.00-------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................TGCCTCTTTTCCACGGCC......................................................1811.001.00---------------------------------------------------------------------------------1.00------------------------------
....................................................................................................................................................................................................................................................CGGGCCGGAGGTCAAGGGCGTCAA.....................................................................................2411.004.00----------------------------------------------------------------------1.00-----------------------------------------
............................................................AGAAGGGAGTCTGGGAACCCTCACGGCCCT.......................................................................................................................................................................................................................................................................301.000.00--1.00-------------------------------------------------------------------------------------------------------------
.......................................................................................................TCCCTGACCCTGGGCGCAC.......................................................................................................................................................................................................................................191.000.00-------------------------------------------------------------------------1.00--------------------------------------
.........................................................................................................................................................................................................................................................................................................................................AACAGCACCATGCAGGTGA.....1911.001.00---------------------------------------------------------------1.00------------------------------------------------
..TGGGTGACGGGCTCCGGGCTCCCGAGGCGA.................................................................................................................................................................................................................................................................................................................................301.000.00--1.00-------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................TAAGACGTCCAACAACAGCACCATGCAGGTGAGC...3411.001.00-------------------------------------------------------------------------------------------------1.00--------------
.........................................................................................................................................................................................................................................................................................TGCCTCTTTTCCACGGCCTCAGC.................................................2311.007.00------------------------------------------------------------------1.00---------------------------------------------
...................................................................................................................................................................................................................................................CCGGGCCGGAGGTCAAGGGCGTCGCTTT..................................................................................281.000.00---------------------------------------------------1.00------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................AGGGATGGAAGGGTCTAAGACG..............................2211.001.00----------------------------1.00-----------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................TTTTCCACGGCCTCAGGGATGGAAGGGTA.....................................291.000.00------------------------------------------------------------------------------1.00---------------------------------
.........................................................................................................................................................................................................................................................................................TGCCTCTTTTCCACGGCCTA....................................................2011.002.00-------------------1.00--------------------------------------------------------------------------------------------
..........................AGGTGAAGAGCATCGTCG.....................................................................................................................................................................................................................................................................................................................181.000.00------------------1.00---------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................GATGGAAGGGTCTAAGAC...............................1811.001.00-------------1.00--------------------------------------------------------------------------------------------------
....................................CATCGGGGGCTGAGGTGGGACCTTA....................................................................................................................................................................................................................................................................................................2511.001.00------1.00---------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................TCCTAGAGGGAACGGC..................................................................................................................................................................1620.500.50---------------------------------------------------------------------------------------------------------0.50------
..............................................................................................................................................................................................................................................................................................................................................CACCATGCAGGTGAGCT..1720.500.50----------------------0.50-----------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................TGCCTCTTTTCCACG.........................................................1530.330.33-------------------------------------------------------------------------------------------------------------0.33--
..............................................................................................................................................................................................................................................TAACCCCGGGCCG......................................................................................................1350.200.20------------------------------------------0.20---------------------------------------------------------------------

Antisense strand
CTTGGGTGACGGGCTCCGGGCTCCCGAGGTGAAGAGCATCGGGGGCTGAGGTGGGACCTTAGAAGGGAGTCTGGGAACCCTCACGGCTCTTATTGGAGTCCCTTCCCTGACCCTGGGCTCTAAACTGCCTTTGCTCAGGCTGTCCCGGAAGCAGGTCCTCCCCGTATCATACCATTCCTAGAGGGAACGGCGCAGGTTGGGACTTCCCTCCCTTTACCATCGTCACCAAGGCATGTGGTAACCCCGGGCCGGAGGTCAAGGGCGTCGCTTCTCCCTAATGTTGCCTCTTTTCCACGGCCTCAGGGATGGAAGGGTCTAAGACGTCCAACAACAGCACCATGCAGGTGAGCTTC
.....................................................................................................................................................................................................................................................((((((..((..(((((.((.((...........)).)))))))..)).)))))).....................................................
...............................................................................................................................................................................................................................................240............................................................303................................................
SizePerfect hitTotal NormPerfect NormRoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR038857(GSM458540)
D20. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189782SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR029124(GSM416753)
HeLa. (hela)		SRR038861(GSM458544)
MM466. (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR038860(GSM458543)
MM426. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189786SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR038859(GSM458542)
MM386. (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR029130(GSM416759)
DLD2. (cell line)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038856(GSM458539)
D11. (cell line)		SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577741(Rovira)
total RNA. (breast)		SRR029126(GSM416755)
143B. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR191563(GSM715673)
83genomic small RNA (size selected RNA from t. (breast)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR038863(GSM458546)
MM603. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR037937(GSM510475)
293cand2. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		TAX577738(Rovira)
total RNA. (breast)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR189787SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
................................................................................................................................CTTTGCTCAGGCTGTCCCGGA............................................................................................................................................................................................................ 2112.002.00------2.00---------------------------------------------------------------------------------------------------------
...........................................................................................................................................................TCCTCCCCGTATCATACCAT.................................................................................................................................................................................. 2012.002.00----2.00-----------------------------------------------------------------------------------------------------------
..............................................................................................................................GCCTTTGCTCAGGCTGTCCCGG............................................................................................................................................................................................................. 2211.001.00---------1.00------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................GGGATGGAAGGGTCTAAGC................................ 191.000.00---------------------------------------------------------------------------1.00------------------------------------
...........................................................................................................................ACTGCCTTTGCTCAGGCTGTCCC............................................................................................................................................................................................................... 2311.001.00----------------1.00-----------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................GGATGGAAGGGTCTAAGACG.............................. 2011.001.00----------------------------------------------------------------------------------------------1.00-----------------
....................................................................................................................................................................................................................TTTACCATCGTCACCAAC........................................................................................................................... 181.000.00-----------------------------------------------------------------------------------------1.00----------------------
..................................................................................................................................................GGAAGCAGGTCCTCCCGGC............................................................................................................................................................................................ 191.000.00------------------1.00---------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................ACTTCCCTCCCTTTAAAA...................................................................................................................................... 181.000.00----------------------------------------------------------------------------1.00-----------------------------------
.............................TGAAGAGCATCGGGGGCT.................................................................................................................................................................................................................................................................................................................. 181.000.00---------------------------------------------1.00------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................ACGTCCAACAACAGCACC............... 1811.001.00------------------1.00---------------------------------------------------------------------------------------------
..........................................................................................................................AACTGCCTTTGCTCAGGCTGTCCC............................................................................................................................................................................................................... 2411.001.00-----------1.00----------------------------------------------------------------------------------------------------
.......................................................................................................................................................CAGGTCCTCCCCGTATCATA...................................................................................................................................................................................... 2011.001.00------1.00---------------------------------------------------------------------------------------------------------
...............................AAGAGCATCGGGGGCAGC................................................................................................................................................................................................................................................................................................................ 181.000.00-----------------------------------------------------------------------------------------------------1.00----------
...............................................................................................................CCTGGGCTCTAAACTGCCT............................................................................................................................................................................................................................... 1911.001.00-------------------------1.00--------------------------------------------------------------------------------------
...............................AAGAGCATCGGGGG.................................................................................................................................................................................................................................................................................................................... 1421.001.00----------------------------------------------------------------------------------------------------------0.500.50----
..............................................................................................................................................................................................................................................................................................................................................CACCATGCAGGTGAGCTTC 1911.001.00-----------------------------------------------------------------------1.00----------------------------------------
.....................................................................................GCTCTTATTGGAGTCCCT.......................................................................................................................................................................................................................................................... 1811.001.00-------------------------------------------------------------------1.00--------------------------------------------
................................................................................................AGTCCCTTCCCTGACCCT............................................................................................................................................................................................................................................... 1830.330.33------------------------------------------------------------------------------------------------------------0.33---
.........................................................................................................................................................................................AACGGCGCAGGTTG.......................................................................................................................................................... 1430.330.33--------------------------------------------------------------------------------------------------------------0.33-
..........................................................................................................................................................................................................................................................................................GCCTCTTTTCCACG......................................................... 1440.250.25---------------------------------------------------------------------------------------------------------------0.25