ID: hsa-mir-6775
GENE: SLC7A5(1)
chr16:87868148-87868397-


(2)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(3)
AGO2.ip 		(1)
AGO3.ip 		(9)
B-CELL 		(7)
BRAIN 		(12)
BREAST 		(40)
CELL-LINE 		(1)
CERVIX 		(3)
HEART 		(7)
HELA 		(8)
LIVER 		(3)
OTHER 		(2)
RRP40.ip 		(23)
SKIN 		(1)
XRN.ip

Sense strand
GCAACATGCCCAGCACTGTATGCAGAGTCGAGGGCGGGACAGCCCGGTGTGTGAGGCAGATGGAGTGCAGATCGCATCTTGGTGACCTGGAAGTCAGCAGCCGTGGGTGTGGAGGGCCCAGGAGGGCTGAGGAACCTCGGGGCATGGGGGAGGGAGGCTGGACAGGAGAGGGCTCACCCAGGCCCTGTCCTCTGCCCCAGGTGAACCTGGCCCTGCCTGTGTTCTTCATCCTGGCCTGCCTCTTCCTGAT
..........................................................................................................................................((((((.((((.((((...((((....(((....)))..)))).)))).)))).))))))....................................................
...................................................................................................................................132.................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR037937(GSM510475)
293cand2. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR029131(GSM416760)
MCF7. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR038862(GSM458545)
MM472. (cell line)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR038854(GSM458537)
MM653. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029125(GSM416754)
U2OS. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)		SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)		SRR040028(GSM532913)
G026N. (cervix)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR189786SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189782DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		TAX577743(Rovira)
total RNA. (breast)		SRR189787SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR191616(GSM715726)
103genomic small RNA (size selected RNA from . (breast)		SRR038853(GSM458536)
MELB. (cell line)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR029130(GSM416759)
DLD2. (cell line)		SRR191493(GSM715603)
155genomic small RNA (size selected RNA from . (breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191490(GSM715600)
15genomic small RNA (size selected RNA from t. (breast)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
...................................................................................................................................................................................AGGCCCTGTCCTCTGCCCCAGA.................................................22193.0024.004.0016.001.0015.001.0015.002.002.00-2.00-3.003.00-1.001.00---2.00-1.001.00--2.002.00-1.00-1.00---1.00-------2.00--1.00---2.001.00-------1.00------1.00---1.00------1.001.00-1.00---------------1.00-1.00------1.00--------1.00---
...................................................................................................................................................................................AGGCCCTGTCCTCTGCCCCAGT.................................................22175.0024.00-23.00--7.00-2.00--1.00-1.001.00--1.00-1.004.00-3.00-2.003.00-1.00-3.001.002.001.00----------1.00--1.00-1.00---1.001.00-----1.00--1.00------1.00----1.00-----1.00---1.00-1.00--1.00-1.00---------1.00--1.00-----1.00-----1.00--
...................................................................................................................................................................................AGGCCCTGTCCTCTGCCCC....................................................19174.0074.0031.001.0033.00---1.00--1.00----4.00-3.00----------------------------------------------------------------------------------------------------
.................................................................................................................................................................ACAGGAGAGGGCTCACCC.......................................................................18133.0033.00----------10.00--8.00-------2.00--3.00------------2.00--------1.001.00----------------1.00-1.00------------------------1.00--1.00-1.00---------------1.00----
...................................................................................................................................................................................AGGCCCTGTCCTCTGCCCCA...................................................20130.0030.0011.00-9.00-2.00----1.00----1.00-1.00------------------------1.00--1.00--------------------------1.00-------------------------------------1.00-1.00-----
...................................................................................................................................................................................AGGCCCTGTCCTCTGCCCCAG..................................................21124.0024.0010.002.002.00---1.00-----2.00-----------------------1.00-2.00-------------1.00------1.00--------------------------------1.00-------------1.00----------
...................................................................................................................................................................................AGGCCCTGTCCTCTGCCCCAGAA................................................23117.0024.00----5.00--1.00----1.00--------------------2.00-2.00---1.002.00--------------------------------1.00-1.00-----------------------------1.00-----------
...................................................................................................................................................................................AGGCCCTGTCCTCTGCCC.....................................................18114.0014.009.00-5.00------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................GGCCCTGTCCTCTGCCCCAGT.................................................21113.001.00--------13.00------------------------------------------------------------------------------------------------------------
........................................................................................................................................TCGGGGCATGGGGGAGGGAGGCTGG.........................................................................................2518.008.00-------1.00-1.00-1.00--1.002.001.00----------------------------------------------1.00-----------------------------------------------------
...................................................................................................................................................................................AGGCCCTGTCCTCTGCCCCATT.................................................2218.0030.00-3.00--2.00-------1.00------------------------------1.00-----------------------------------------1.00-------------------------------
........................................................................................................................................TCGGGGCATGGGGGAGGGAGGCTGGT........................................................................................2616.008.00---1.00---4.00-------1.00-----------------------------------------------------------------------------------------------------
...................................................................................................................................................................................AGGCCCTGTCCTCTGCCCCAGTA................................................2316.0024.00----3.00-----------------------------1.00--------1.00-------------------------------------------------1.00-----------------------
...................................................................................................................................................................................AGGCCCTGTCCTCTGCCCCAGAAGT..............................................2515.0024.00---2.00--2.00--------------------------------1.00-----------------------------------------------------------------------------
...................................................................................................................................................................................AGGCCCTGTCCTCTGCCCCAGTAT...............................................2415.0024.00-----4.00--------------------------------------------------------------1.00------------------------------------------------
...................................................................................................................................................................................AGGCCCTGTCCTCTGCCCCAGAT................................................2314.0024.001.003.00-------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................AGGCCCTGTCCTCTGCCCCAGAGA...............................................2414.0024.00---1.001.00------1.00---------------------------------------1.00-----------------------------------------------------------------
....................................................................................ACCTGGAAGTCAGCAGCCGTGGGTGTGGAGGGCCCAGGAGGGCTGAGGAACCTCGGGGC...........................................................................................................5914.004.00-----------------4.00---------------------------------------------------------------------------------------------------
.......................................................................................................................................CTCGGGGCATGGGGGAGGGAGGCTGGT........................................................................................2714.001.00-------4.00-------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................CCAGGCCCTGTCCTCTGCCCCAG..................................................2313.003.00---------3.00-----------------------------------------------------------------------------------------------------------
............................................................................................................................................................GCTGGACAGGAGAGGGCTCACCCAGGC...................................................................2713.003.00-3.00-------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CAGGCCCTGTCCTCTGCCCC....................................................2013.003.002.00-1.00------------------------------------------------------------------------------------------------------------------
........................................................................................................................................TCGGGGCATGGGGGAGGGAGGCTAT.........................................................................................253.000.00----3.00----------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................AGGCCCTGTCCTCTGCCCCAAT.................................................2213.0030.00----1.00----1.00----------------1.00------------------------------------------------------------------------------------------
...................................................................................................................................................................................AGGCCCTGTCCTCTGCCCCAA..................................................2113.0030.00--------------------------------------------------------1.00-----------------1.00-------------1.00----------------------------
...................................................................................................................................................................................AGGCCCTGTCCTCTGCCCCAGATT...............................................2412.0024.00---1.00------------------------------------------------------------------1.00----------------------------------------------
.............................................................................................................................................................CTGGACAGGAGAGGGCTCACCCAGG....................................................................2512.002.00-2.00-------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................GGTGAACCTGGCCCTGCCTGTG.............................2212.002.00-2.00-------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................AGGCCCTGTCCTCTGCCCCAGAAG...............................................2412.0024.00-----------1.00---------1.00-----------------------------------------------------------------------------------------------
...................................................................................................................................................................................AGGCCCTGTCCTCTGCCCCAGC.................................................2212.0024.00-2.00-------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................GGGGCATGGGGGAGGGAGGCTGG.........................................................................................2312.002.00-------2.00-------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CAGGCCCTGTCCTCTGCCCCAG..................................................2212.002.00------1.00------------------------------------------------------1.00-------------------------------------------------------
...................................................................................................................................................................................AGGCCCTGTCCTCTGCCCTTTT.................................................2212.0014.00----2.00----------------------------------------------------------------------------------------------------------------
......................................................................................................GTGGGTGTGGAGGGCGGAG.................................................................................................................................192.000.00--------------------------------2.00------------------------------------------------------------------------------------
........CCCAGCACTGTATGCAGAGTCGAGGGC.......................................................................................................................................................................................................................2712.002.00------2.00--------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CAGGCCCTGTCCTCTGCCCCAA..................................................222.000.00------2.00--------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................AGGCCCTGTCCTCTGCCCCAGAC................................................2312.0024.00-----------2.00---------------------------------------------------------------------------------------------------------
..........................................................................................................................................................AGGCTGGACAGGAGAGGG..............................................................................1812.002.00-2.00-------------------------------------------------------------------------------------------------------------------
........................................................................................................................................TCGGGGCATGGGGGAGGGAGT.............................................................................................212.000.00---2.00-----------------------------------------------------------------------------------------------------------------
...................................................................................................GCCGTGGGTGTGGAGGGCCCAGGAGG.............................................................................................................................2612.002.00---2.00-----------------------------------------------------------------------------------------------------------------
...................................................................................................................GCCCAGGAGGGCTGAGGA.....................................................................................................................1811.001.00--------------1.00------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................AGGCCCTGTCCTCTGCCCCAGAGT...............................................2411.0024.00-------------------1.00-------------------------------------------------------------------------------------------------
...................................................................................................................................................................................AGGCCCTGTCCTCTGCCCCGGT.................................................2211.0074.00-1.00-------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................TTCATCCTGGCCTGCCTCTTCCT...2311.001.00---------------------------------------------------------------------------------1.00-----------------------------------
...................................................................................................................................................................................AGGCCCTGTCCTCTGCCCCATA.................................................2211.0030.00--------------------------------------------------------------------------------1.00------------------------------------
...................................................................................................................................................................................AGGCCCTGTCCTCTGCCCCAAGT................................................2311.0030.00--1.00------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................GGCCCTGTCCTCTGCCCCAG..................................................2011.001.00---------------------------------------------1.00-----------------------------------------------------------------------
..........................................................................................................................................................................................................................GTGTTCTTCATCCTGGCCTGCCTCTTC.....2711.001.00-------------------------------1.00-------------------------------------------------------------------------------------
..............................................................................................................................................................TGGACAGGAGAGGGCTCACCCAGG....................................................................2411.001.001.00--------------------------------------------------------------------------------------------------------------------
.....................................................................................................................CCAGGAGGGCTGAGGAACCTG................................................................................................................211.000.00------------------------------1.00--------------------------------------------------------------------------------------
......................................................................................................GTGGGTGTGGAGGGCCCAGGAGGGCTGA........................................................................................................................2811.001.00--------------------------------------------------------------------------------------------------1.00------------------
.....ATGCCCAGCACTGTATGCAGAG...............................................................................................................................................................................................................................2211.001.00---1.00-----------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................AGGCCCTGTCCTCTGCCCCAGTACA..............................................2511.0024.00-1.00-------------------------------------------------------------------------------------------------------------------
.......................................CAGCCCGGTGTGTGAGGC.................................................................................................................................................................................................1811.001.00------1.00--------------------------------------------------------------------------------------------------------------
......................................................................................................................CAGGAGGGCTGAGGAACCTG................................................................................................................201.000.00------------------------------------1.00--------------------------------------------------------------------------------
..........CAGCACTGTATGCAGAGTCGAGGGCGGGA...................................................................................................................................................................................................................2911.001.00---------1.00-----------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................GGCCCTGTCCTCTGCCCCAGA.................................................2111.001.00----------------1.00----------------------------------------------------------------------------------------------------
........................................................................................................................................TCGGGGCATGGGGGAGG.................................................................................................1731.001.000.33--0.33-------0.33---------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................AGGCCCTGTCCTCTGCCCCAAAA................................................2311.0030.00-----------------------------1.00---------------------------------------------------------------------------------------
..............................................................................................................GGAGGGCCCAGGAGGGCTGA........................................................................................................................2011.001.00-----------------------------------------------------1.00---------------------------------------------------------------
...................................................................................................................................................................................AGGCCCTGTCCTCTGCCCCCG..................................................2111.0074.001.00--------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................GACAGGAGAGGGCTCACCCA......................................................................2011.001.00-----------------------------------------------1.00---------------------------------------------------------------------
...................................................................................................................................................................................AGGCCCTGTCCTCTGCCCCT...................................................2011.0074.001.00--------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................GCTGGACAGGAGAGGGCTCACCCAGG....................................................................2611.001.00-1.00-------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................CTTCATCCTGGCCTGCCTCTTCCTG..2511.001.00-------------------------------1.00-------------------------------------------------------------------------------------
................................................................................................................................................................................................................................TTCATCCTGGCCTGCCTCTTCC....2211.001.00------------------------------------------------1.00--------------------------------------------------------------------
...................................................................................................................................................................................AGGCCCTGTCCTCTGCCCAA...................................................2011.0014.00----1.00----------------------------------------------------------------------------------------------------------------
..........CAGCACTGTATGCAGAGTCGAGGGCGGG....................................................................................................................................................................................................................2811.001.00------1.00--------------------------------------------------------------------------------------------------------------
..................................................................................................AGCCGTGGGTGTGGAGGGCC....................................................................................................................................2011.001.00-----------------------------------------------------------------------------------------------------------1.00---------
.........................................................................................................................................CGGGGCATGGGGGAGGGAGGCTGG.........................................................................................2411.001.00---------------1.00-----------------------------------------------------------------------------------------------------
......................................................................................................GTGGGTGTGGAGGGCGG...................................................................................................................................171.000.00---1.00-----------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................AGGCCCTGTCCTCTGCCCCAGAAC...............................................2411.0024.00---1.00-----------------------------------------------------------------------------------------------------------------
..........................................CCCGGTGTGTGAGGCAGATGGAGTGC......................................................................................................................................................................................2611.001.00------1.00--------------------------------------------------------------------------------------------------------------
........................................................................................................................................TCGGGGCATGGGGGAGGGAAA.............................................................................................2121.000.50---1.00-----------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................AGGTGAACCTGGCCCTGC..................................1811.001.00--------------------1.00------------------------------------------------------------------------------------------------
...................................................................................................................................................................................AGGCCCTGTCCTCTGCCCCCGA.................................................2211.0074.00---1.00-----------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................AGGCCCTGTCCTCTGCCCCAGAAA...............................................2411.0024.00-----------------------------------------------------1.00---------------------------------------------------------------
....................................................................................ACCTGGAAGTCAGCAGCCGTGGGTGTGGAGGGCCCAGGAGGGCTGAGGAACCTCGCGGC...........................................................................................................591.000.00-----------------1.00---------------------------------------------------------------------------------------------------
.......................................................................................................................................CTCGGGGCATGGGGGAGGGAGGCTGT.........................................................................................261.000.00---1.00-----------------------------------------------------------------------------------------------------------------
.......................................................................................................TGGGTGTGGAGGGCCCAGG................................................................................................................................1921.001.00--1.00------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CAGGCCCTGTCCTCTGCCCCAGT.................................................2311.002.00-------------------------------------------------------1.00-------------------------------------------------------------
...........................................CCGGTGTGTGAGGCAGATGGA..........................................................................................................................................................................................2111.001.001.00--------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................TGGACAGGAGAGGGCTCACC........................................................................2011.001.001.00--------------------------------------------------------------------------------------------------------------------
.......................AGAGTCGAGGGCGGGAGAAG...............................................................................................................................................................................................................201.000.00-----------------------------------------------------------------------------------1.00---------------------------------
.......................................................................................................................................CTCGGGGCATGGGGGAGGGAGGCTGG.........................................................................................2611.001.00---1.00-----------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CAGGCCCTGTCCTCTGCCCCTAT.................................................2311.003.00----1.00----------------------------------------------------------------------------------------------------------------
........................................................................................................................................................GGAGGCTGGACAGGACC.................................................................................171.000.00------------------------------------------------------1.00--------------------------------------------------------------
...................................................................................................................................................................................AGGCCCTGTCCTCTGCCCCAGAAGA..............................................2511.0024.00-1.00-------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................AGGCCCTGTCCTCTGCCCCAATAA...............................................2411.0030.00------1.00--------------------------------------------------------------------------------------------------------------
........................................................................................................................................TCGGGGCATGGGGGAGGGAGGCTGGCG.......................................................................................2711.008.001.00--------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................GGTGAACCTGGCCCTGCCTGT..............................2111.001.00----------------------------1.00----------------------------------------------------------------------------------------
.................................................................................................................................................................ACAGGAGAGGGCTCATGTA......................................................................191.000.00------------------------------------------------------1.00--------------------------------------------------------------
......................................................................................................................................................................................................AGGTGAACCTGGCCCTGCCTGTTC............................241.000.00------------------------------------------------1.00--------------------------------------------------------------------
......................................................................................................................................CCTCGGGGCATGGGGGAGGGAGGCTGGT........................................................................................281.000.00---1.00-----------------------------------------------------------------------------------------------------------------
........................................................................................................................................TCGGGGCATGGGGGAGGGAGGCTGT.........................................................................................251.000.00-------------------1.00-------------------------------------------------------------------------------------------------
............................................................................................................................................................GCTGGACAGGAGAGGGCTCACCCAGGCCCTG...............................................................3111.001.00-1.00-------------------------------------------------------------------------------------------------------------------
................TGTATGCAGAGTCGAGGGC.......................................................................................................................................................................................................................1911.001.00----------------------------------------------------1.00----------------------------------------------------------------
..........................................................................................................................................GGGGCATGGGGGAGGGAGGCTGGT........................................................................................2411.002.00---------------1.00-----------------------------------------------------------------------------------------------------
........................................................................................................................................TCGGGGCATGGGGGAG..................................................................................................1630.670.67-----------0.33----------0.33----------------------------------------------------------------------------------------------
........................................................................................................................................TCGGGGCATGGGGGAGGGA...............................................................................................1920.500.50--0.50------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................AGGCCCTGTCCTCTGCCATA...................................................2020.500.50------0.50--------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................AGGCCCTGTCCTCTGCC......................................................1720.500.50-------------------------------------------------------------------------------------------------------------------0.50-
..................................................................................................................................................................................................................................CATCCTGGCCTGCCTCT.......1730.330.33-------------------------------0.33-------------------------------------------------------------------------------------
.........................................................................................................GGTGTGGAGGGCCCAGGA...............................................................................................................................1840.250.25--------------------------------------------------------------------------------------------------------------------0.25
...................................................................................................................................................................................AGGCCCTGTCCTCTGCTCC....................................................1940.250.25--0.25------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................AGGCCCTGTCCTCTGC.......................................................1640.250.25---------0.25-----------------------------------------------------------------------------------------------------------
......................................................................................CTGGAAGTCAGCAGCC....................................................................................................................................................1660.170.17-------------------------------------------------------0.17-------------------------------------------------------------

Antisense strand
GCAACATGCCCAGCACTGTATGCAGAGTCGAGGGCGGGACAGCCCGGTGTGTGAGGCAGATGGAGTGCAGATCGCATCTTGGTGACCTGGAAGTCAGCAGCCGTGGGTGTGGAGGGCCCAGGAGGGCTGAGGAACCTCGGGGCATGGGGGAGGGAGGCTGGACAGGAGAGGGCTCACCCAGGCCCTGTCCTCTGCCCCAGGTGAACCTGGCCCTGCCTGTGTTCTTCATCCTGGCCTGCCTCTTCCTGAT
..........................................................................................................................................((((((.((((.((((...((((....(((....)))..)))).)))).)))).))))))....................................................
...................................................................................................................................132.................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR037937(GSM510475)
293cand2. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR029131(GSM416760)
MCF7. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR038862(GSM458545)
MM472. (cell line)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR038854(GSM458537)
MM653. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029125(GSM416754)
U2OS. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)		SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)		SRR040028(GSM532913)
G026N. (cervix)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR189786SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189782DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		TAX577743(Rovira)
total RNA. (breast)		SRR189787SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR191616(GSM715726)
103genomic small RNA (size selected RNA from . (breast)		SRR038853(GSM458536)
MELB. (cell line)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR029130(GSM416759)
DLD2. (cell line)		SRR191493(GSM715603)
155genomic small RNA (size selected RNA from . (breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191490(GSM715600)
15genomic small RNA (size selected RNA from t. (breast)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
...................................GGGACAGCCCGGTGTGTAG.................................................................................................................................................................................................... 191.000.00--------------------------------------------------------------1.00------------------------------------------------------
.......................................................................................................................................................................................................................CCTGTGTTCTTCATCCTGGC............... 2011.001.00---1.00-----------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................AGGCTGGACAGGAGAGTCG............................................................................. 191.000.00-------------------------------------------------------------------------------------------------------1.00-------------
..................................................................................................................................................................................CAGGCCCTGTCCTCTGCTGGT................................................... 211.000.00--------------------------------------------------------------------------------------------------------------1.00------
..........................................................................................................................................................AGGCTGGACAGGAGAGTCGC............................................................................ 201.000.00----------------------------------------------------------------------------------------------------1.00----------------
...............................................................................................................................................................................ACCCAGGCCCTGTCCTAG......................................................... 181.000.00--------------------------------------------------------------------------------------1.00------------------------------
..........................................................................................................................................................AGGCTGGACAGGAGATCG.............................................................................. 181.000.00------------------------------------------------------------------------------------------1.00--------------------------
.................................................................................................................................................................................................................GCCCTGCCTGTGTTCTTTT...................... 191.000.00-----------------------------------------------------------------------------------------------------1.00---------------