ID: hsa-mir-6765
GENE: JAG2(14)
chr14:105617065-105617251-


(1)
AGO1.ip 		(3)
AGO2.ip 		(7)
BREAST 		(25)
CELL-LINE 		(3)
CERVIX 		(1)
FIBROBLAST 		(1)
HEART 		(2)
HELA 		(1)
LIVER 		(1)
OTHER 		(14)
SKIN

Sense strand
CAGACGTCAACGACTGTCGCGGGCAGTGTCAGCATGGGGGCACCTGCAAGGTGAGGCGGGGCCAGGAGGGTGTGTGGCGTGGGTGCTGCGGGGCCGTCAGGGTGCCTGCGGGACGCTCACCTGGCTGGCCCGCCCAGGACCTGGTGAACGGGTACCAGTGTGTGTGCCCACGGGGCTTCGGAGGCCG
...................................................((.(((.(((((((..(((((.(((.((..((..(((((....)))...))..))..))...))).)))))..))))))))))))...................................................
..................................................51....................................................................................137................................................
SizePerfect hitTotal NormPerfect NormSRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR189786SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR189782SRR037935(GSM510473)
293cand3. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029129(GSM416758)
SW480. (cell line)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR191504(GSM715614)
124genomic small RNA (size selected RNA from . (breast)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040007(GSM532892)
G601T. (cervix)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR191421(GSM715531)
122genomic small RNA (size selected RNA from . (breast)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR191492(GSM715602)
154genomic small RNA (size selected RNA from . (breast)		SRR189787SRR037938(GSM510476)
293Red. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR191620(GSM715730)
167genomic small RNA (size selected RNA from . (breast)		SRR029130(GSM416759)
DLD2. (cell line)		SRR191486(GSM715596)
125genomic small RNA (size selected RNA from . (breast)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR191449(GSM715559)
144genomic small RNA (size selected RNA from . (breast)		SRR189784SRR040018(GSM532903)
G701N. (cervix)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
....................................................................................................................TCACCTGGCTGGCCCGCCCAGT.................................................22140.008.00-2.009.00-6.00-2.004.003.002.00-2.00-1.00--1.00---1.00-----------1.00-1.00------1.00-1.001.00-1.00-----1.00------
..................................................GTGAGGCGGGGCCAGGAGGGTGTGT................................................................................................................25129.0029.0025.00----3.00------1.00----------------------------------------------
....................................................................................................................TCACCTGGCTGGCCCGCCCAG..................................................2118.008.00--2.003.00-----1.00---1.00--1.00------------------------------------------
....................................................................................................................TCACCTGGCTGGCCCGCCCAGC.................................................2216.008.00-3.00--1.00---------2.00--------------------------------------------
.....................................................................................................................CACCTGGCTGGCCCGCCCAGT.................................................214.000.00----1.00-1.00--------------------------------------1.00--1.00----------
................................................................................................................ACGCTCACCTGGCTGGCCCGCCCAGTC................................................273.000.00-3.00---------------------------------------------------------
...................................................TGAGGCGGGGCCAGGAGGGTGTG.................................................................................................................2313.003.00---1.00-1.00------------------1.00----------------------------------
..................................................GTGAGGCGGGGCCAGGAGGGCG...................................................................................................................223.000.00-2.00--------------------------------------1.00------------------
....................................................................................................................TCACCTGGCTGGCCCGCCCAGTT................................................2313.008.00--------------------------1.00---1.00----------------------1.00-----
..................................................GTGAGGCGGGGCCAGGAGGGTGC..................................................................................................................233.000.00-3.00---------------------------------------------------------
..................................................GTGAGGCGGGGCCAGGAGGGCGT..................................................................................................................232.000.00-2.00---------------------------------------------------------
...............................................................AGGAGGGTGTGTGGCGT...........................................................................................................1712.002.00---------------2.00-------------------------------------------
...................................................TGAGGCGGGGCCAGGAGGGTGT..................................................................................................................2212.002.001.00--1.00-------------------------------------------------------
..................................................GTGAGGCGGGGCCAGGAGGGTGTG.................................................................................................................2412.002.002.00----------------------------------------------------------
...................................................TGAGGCGGGGCCAGGAGGGTGTGT................................................................................................................2412.002.00---2.00-------------------------------------------------------
....................................................................................................................TCACCTGGCTGGCCCGCCCAGTAT...............................................2412.008.00---------------------------1.00---------------------1.00---------
..................................................GTGAGGCGGGGCCAGGAGGGTGGGT................................................................................................................252.000.002.00----------------------------------------------------------
....................................................................................................................TCACCTGGCTGGCCCGCCCAA..................................................2112.001.00---1.00------1.00------------------------------------------------
......................................................................................................................ACCTGGCTGGCCCGCCCAGT.................................................201.000.00------------------------------------------------------1.00----
......TCAACGACTGTCGCGG.....................................................................................................................................................................1611.001.00-----------------------------------------------1.00-----------
....................................................................................................................TCACCTGGCTGGCCCGCCCA...................................................2011.001.00----------------------1.00------------------------------------
....................................................................................................................TCACCTGGCTGGCCCGCCCAGAA................................................2311.008.001.00----------------------------------------------------------
.....................................................................................................................CACCTGGCTGGCCCGCCCAGTA................................................221.000.00-------------------------1.00---------------------------------
..................................................GTGAGGCGGGGCCAGGAGGGTGTGTT...............................................................................................................2611.0029.00-----1.00-----------------------------------------------------
..................................................GTGAGGCGGGGCCAGGAGGGTGTGCG...............................................................................................................2611.002.00-1.00---------------------------------------------------------
...................................................TGAGGCGGGGCCAGGT........................................................................................................................161.000.00---1.00-------------------------------------------------------
................................................................................................................ACGCTCACCTGGCTGGCCCGCCCACC.................................................261.000.00-1.00---------------------------------------------------------
....................................................................................................................TCACCTGGCTGGCCCGCCATTT.................................................221.000.00---------------------------------------1.00-------------------
....................................................................................................................TCACCTGGCTGGCCCGCCCAGTTTT..............................................2511.008.00-------------------1.00---------------------------------------
....................................................................................................................TCACCTGGCTGGCCCGCCCAGATA...............................................2411.008.00-------------------------------------1.00---------------------
.............................CAGCATGGGGGCACCTGCAAG.........................................................................................................................................2111.001.00-----------------------1.00-----------------------------------
..................................................GTGAGGCGGGGCCAGGAGGGTGT..................................................................................................................2311.001.00-----1.00-----------------------------------------------------
................................................................................................................ACGCTCACCTGGCTGGCCCGCCCAATC................................................271.000.00-1.00---------------------------------------------------------
...........GACTGTCGCGGGCAGTGTCAGCATG.......................................................................................................................................................2511.001.00---------------------------------1.00-------------------------
..................................................GTGAGGCGGGGCCAGGAGGGTGTGTG...............................................................................................................2611.001.00-1.00---------------------------------------------------------
...................................................TGAGGCGGGGCCAGGAGGGTGTGA................................................................................................................2411.003.00---1.00-------------------------------------------------------
..................................................GTGAGGCGGGGCCAGGAG.......................................................................................................................1811.001.00------------1.00----------------------------------------------
.......CAACGACTGTCGCGGG....................................................................................................................................................................1611.001.00------------------------------------1.00----------------------
....................................................................................................................TCACCTGGCTGGCCCGCCAAGT.................................................221.000.00----1.00------------------------------------------------------
.....................................................................................................................CACCTGGCTGGCCCGCCCAGC.................................................211.000.00------1.00----------------------------------------------------
..................................................GTGAGGCGGGGCCAGGAA.......................................................................................................................181.000.00----------1.00------------------------------------------------
..................................................GTGAGGCGGGGCCAGGAGGGTGCG.................................................................................................................241.000.00-1.00---------------------------------------------------------
........................................................................................................................................................TACCAGTGTGTGTGCCCACGGGGCTTCGG......2911.001.00----------------------------1.00------------------------------
....................................................................................................................TCACCTGGCTGGCCCGCCCAAT.................................................2211.001.00---------------------1.00-------------------------------------
.....................................................AGGCGGGGCCAGGAGGGGTGT.................................................................................................................211.000.00---1.00-------------------------------------------------------
..................................................GTGAGGCGGGGCCAGGAGGGTGTGTGGCGTGGGTGCTGCGGGGCCGTCAGGGTGCCTGCGGGACGCTCACCTGGC..............................................................7511.001.00-----------------------------------1.00-----------------------
....................................................................................................................TCACCTGGCTGGCCCGCCCAGTA................................................2311.008.00------1.00----------------------------------------------------
....................................................................................................................TCACCTGGCTGGCCCGCCCAGA.................................................2211.008.00-------------------------------1.00---------------------------
....................................................................................................................TCACCTGGCTGGCCCGCCCAAA.................................................2211.001.00--------------------------------------1.00--------------------
......TCAACGACTGTCGCGGGCA..................................................................................................................................................................1911.001.00------------------1.00----------------------------------------
....................................................................................................................TCACCTGGCTGGCCCGCCCAGTC................................................2311.008.00-1.00---------------------------------------------------------
....................................................................................................................TCACCTGGCTGGCCCGCCCCGA.................................................221.000.00-----------------------------1.00-----------------------------
.....................................................................................CTGCGGGGCCGTCAGT......................................................................................161.000.00--------------------------------------------------1.00--------
.....................................................................................................................CACCTGGCTGGCCCGCCCAGA.................................................211.000.00------------------------------------------1.00----------------
...................................................TGAGGCGGGGCCAGGAGGGTGC..................................................................................................................221.000.00-1.00---------------------------------------------------------
...................................................TGAGGCGGGGCCAGGAGGGTGCG.................................................................................................................231.000.00-1.00---------------------------------------------------------
..........................................................................................................................................................................CGGGGCTTCGGAGGC..1560.170.17-------------------------------------------------------0.17---
.......................................................................................................................CCTGGCTGGCCCGCC.....................................................1560.170.17--------------------------------------------------------0.17--
..............TGTCGCGGGCAGT................................................................................................................................................................13100.100.10----------------------------------------------------------0.10

Antisense strand
CAGACGTCAACGACTGTCGCGGGCAGTGTCAGCATGGGGGCACCTGCAAGGTGAGGCGGGGCCAGGAGGGTGTGTGGCGTGGGTGCTGCGGGGCCGTCAGGGTGCCTGCGGGACGCTCACCTGGCTGGCCCGCCCAGGACCTGGTGAACGGGTACCAGTGTGTGTGCCCACGGGGCTTCGGAGGCCG
...................................................((.(((.(((((((..(((((.(((.((..((..(((((....)))...))..))..))...))).)))))..))))))))))))...................................................
..................................................51....................................................................................137................................................
SizePerfect hitTotal NormPerfect NormSRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR189786SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR189782SRR037935(GSM510473)
293cand3. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029129(GSM416758)
SW480. (cell line)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR191504(GSM715614)
124genomic small RNA (size selected RNA from . (breast)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040007(GSM532892)
G601T. (cervix)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR191421(GSM715531)
122genomic small RNA (size selected RNA from . (breast)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR191492(GSM715602)
154genomic small RNA (size selected RNA from . (breast)		SRR189787SRR037938(GSM510476)
293Red. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR191620(GSM715730)
167genomic small RNA (size selected RNA from . (breast)		SRR029130(GSM416759)
DLD2. (cell line)		SRR191486(GSM715596)
125genomic small RNA (size selected RNA from . (breast)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR191449(GSM715559)
144genomic small RNA (size selected RNA from . (breast)		SRR189784SRR040018(GSM532903)
G701N. (cervix)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.............................................................................................................GGGACGCTCACCTGGCCG............................................................ 181.000.00---------------------------------------------------1.00-------
................TCGCGGGCAGTGTCAGCATGG...................................................................................................................................................... 2111.001.00-----------------1.00-----------------------------------------
............................................................................................................CGGGACGCTCACC.................................................................. 1390.110.11---------------------------------------------------------0.11-