ID: hsa-mir-6756
GENE: MCAM(10)
chr11:119183610-119183859-


(1)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(3)
AGO2.ip
(9)
B-CELL
(5)
BRAIN
(33)
BREAST
(26)
CELL-LINE
(9)
CERVIX
(9)
HEART
(4)
HELA
(5)
LIVER
(1)
OTHER
(1)
RRP40.ip
(51)
SKIN
(1)
TESTES
(1)
UTERUS
(1)
XRN.ip

Sense strand
ACATGAAAATGTTTTTCTAGGGTTGACACTGAGCAGTAAAAGTGCTGGGTTGAAGGGTTTCCAGCTTGCATTTGTACCTGGCCTTCTACAGGGGACAGGGGGCTATTTAGATGGTCCCCTGCCAACCCCAGTGGACAACCCTAGGGTGGGGCTGGAGGTGGGGCTGAGGCTGAGTCTTCCTCCCCTTCCTCCCTGCCCAGGGGTCCACATTCAGTCGTCCCAGACTGTGGAGTCGAGTGGTTTGTACACC
...............................................................................................................................................(((..(((..(((((.((((..(((((...)))))..))))))))).)))..)))....................................................
.........................................................................................................................................138...........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
TAX577741(Rovira)
total RNA. (breast)
SRR038863(GSM458546)
MM603. (cell line)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189782SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
TAX577746(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR040016(GSM532901)
G645N. (cervix)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029124(GSM416753)
HeLa. (hela)
SRR038861(GSM458544)
MM466. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
TAX577579(Rovira)
total RNA. (breast)
TAX577743(Rovira)
total RNA. (breast)
SRR038856(GSM458539)
D11. (cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191580(GSM715690)
103genomic small RNA (size selected RNA from . (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR040018(GSM532903)
G701N. (cervix)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577590(Rovira)
total RNA. (breast)
SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189786DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR029129(GSM416758)
SW480. (cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR040039(GSM532924)
G531T. (cervix)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR189784GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM339995(GSM339995)
hues6NP. (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR038854(GSM458537)
MM653. (cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038859(GSM458542)
MM386. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR040010(GSM532895)
G529N. (cervix)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR191449(GSM715559)
144genomic small RNA (size selected RNA from . (breast)
TAX577740(Rovira)
total RNA. (breast)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR038860(GSM458543)
MM426. (cell line)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038858(GSM458541)
MEL202. (cell line)
SRR040032(GSM532917)
G603N. (cervix)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577739(Rovira)
total RNA. (breast)
SRR191422(GSM715532)
129genomic small RNA (size selected RNA from . (breast)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR191558(GSM715668)
61genomic small RNA (size selected RNA from t. (breast)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)
SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)
SRR191393(GSM715503)
22genomic small RNA (size selected RNA from t. (breast)
SRR040014(GSM532899)
G623N. (cervix)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR040020(GSM532905)
G699N_2. (cervix)
TAX577588(Rovira)
total RNA. (breast)
SRR191432(GSM715542)
169genomic small RNA (size selected RNA from . (breast)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR191466(GSM715576)
114genomic small RNA (size selected RNA from . (breast)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR040029(GSM532914)
G026T. (cervix)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR191576(GSM715686)
86genomic small RNA (size selected RNA from t. (breast)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
....................................................................................................................................................................................TCCCCTTCCTCCCTGCCCAGT.................................................21250.005.003.004.50--3.002.501.002.00-1.502.00-1.502.001.001.50---0.50-0.501.00--1.00--------0.500.501.50--1.00-0.500.50------0.50-0.50-0.50--0.50----1.500.501.000.50--0.50---------------1.00-------------0.501.000.500.50----0.501.00--0.500.50--0.50------0.500.50-0.50-0.50-----------0.50--0.500.50--0.50--------0.50---
...................................................................................................................................................................................CTCCCCTTCCTCCCTGCCCAGT.................................................2240.000.003.00--1.003.001.00-1.00--1.002.00-1.00-1.00---1.00-1.00-3.00-1.00-2.00-1.00---1.001.00--2.001.00-1.00-1.002.00-1.00--2.00---------------1.00-------------------------1.00----------1.00--1.00---1.00------------------------------------------------
....................................................................................................................................................................................TCCCCTTCCTCCCTGCCCAGTT................................................22237.005.002.002.50---1.501.501.50-1.501.00-1.501.000.500.50--0.501.00-2.001.50------0.50--0.500.500.501.000.500.50-------0.50-0.50-----1.000.500.50--0.500.500.50-1.000.50---0.50--1.00--------------------0.50-------0.50-----0.50----------------0.50----0.500.50-0.50--0.50----------------0.50-0.50-0.50--
....................................................................................................................................................................................TCCCCTTCCTCCCTGCCCAGA.................................................21226.005.001.502.00--1.500.50-0.50-1.500.50-0.50-1.00---1.00-----0.500.50------2.00-0.500.50-----0.50---0.50-----1.00---0.50-0.50-1.00----------------------------0.501.00-------0.50--0.50--------0.50---0.50---0.50-0.50---------0.50--0.50--0.50-------0.50----0.500.50-------
...................................................................................................................................................................................CTCCCCTTCCTCCCTGCCCAGA.................................................2223.000.00-----2.00--3.00-1.001.00--2.00-1.00--------1.00---1.00---1.00-------1.00-----1.00----1.00----1.001.00-1.00--------1.00----------------------1.00---1.00-----1.00------------------------------------------------------
..............................................................................................................................................AGGGTGGGGCTGGAGGTGGGGCT.....................................................................................2318.008.00--2.002.00-------------1.00-------------2.00-------------------------------------------------------1.00---------------------------------------------------------------------
....................................................................................................................................................................................TCCCCTTCCTCCCTGCCCAG..................................................2025.005.000.500.50---0.50---1.00-----------------------------0.50----------0.50-0.50------------------------------------------------------0.50----------------------------0.50--------------------
..............................................................................................................................................AGGGTGGGGCTGGAGGTGGGGC......................................................................................2215.005.00---1.00--2.00---------------------------------------------------------------------------1.00-------------------------------1.00------------------------------------------
....................................................................................................................................................................................TCCCCTTCCTCCCTGCCCATT.................................................2124.502.50----------------3.00-----------------------------------------------------------------------0.50-------------------------------------0.50-------------------0.50----------
....................................................................................................................................................................................TCCCCTTCCTCCCTGCCCAGAT................................................2224.505.001.000.50-------0.50--0.50-------------------------------------------------------------------------------------------------0.50--------------------0.50-------0.50-------0.50---------
..................................................................................................................................................TGGGGCTGGAGGTGGGGCTGAGG.................................................................................2314.004.001.00-------------------1.00-------2.00--------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................TAGGGTGGGGCTGGAGGTGG.........................................................................................2022.502.50--0.50---2.00------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCCCCTTCCTCCCTGCCCAGTA................................................2222.505.000.50------------0.50---------------0.50-------------------------0.50-----------------------------------------------------------------------------------------------0.50-----
....................................................................................................................................................................................TCCCCTTCCTCCCTGCCCA...................................................1922.502.500.50---0.50------------------------------0.50-------------------------------------------------------0.50---------------0.50-------------------------------------------------
......................................................................................TACAGGGGACAGGGGGCTATTT..............................................................................................................................................2212.002.00--2.00----------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................TGGGGCTGGAGGTGGGGCTGAGGT................................................................................2412.004.00---------------------------------------------------------------------------1.00---------------------------------------1.00-----------------------------------------
.............................................................................................................................................................................................................................AGACTGTGGAGTCGAGTG...........1812.002.00---------------1.00-1.00-------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................TAGGGTGGGGCTGGAGGTGA.........................................................................................2022.000.50--2.00----------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................ACAACCCTAGGGTGGGGCTG................................................................................................2012.002.00------------------------2.00------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................AGACTGTGGAGTCGAGTGGTTTGTACACC2912.002.00------------------1.00---1.00--------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCCCCTTCCTCCCTGCCCAAT.................................................2122.002.50-------------------0.50------------0.50-------------------------------------------------------------------------------------0.50-----------------------0.50--------------
.............................................................................................................................................................................................................................AGACTGTGGAGTCGAGTGGTTTGTA....2512.002.00--------------------------1.00---1.00------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................AGACTGTGGAGTCGAGTGGTTTGTACA..2712.002.00--------------------------1.00---1.00------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................AGGGTGGGGCTGGAGGTGGGGTT.....................................................................................232.000.00---1.00-------------------------------------------------------------------------------------------1.00-------------------------------------------------------------
.............................................................................................................................................................................................................................AGACTGTGGAGTCGAGTGGTTG.......222.000.00----------------------------------------------2.00--------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCCCCTTCCTCCCTGCCCAGTTT...............................................2321.505.000.50-----------------------------------0.50--0.50---------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................GGGGCTGGAGGTGGGGCTGA...................................................................................2011.001.00--------------------------------------------1.00----------------------------------------------------------------------------------------------------------------
..............................................................................................................................................AGGGTGGGGCTGGAGGTGGGGCTT....................................................................................2411.008.00-------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------
.............................................................................................................................................TAGGGTGGGGCTGGAGGTGGGGCTAA...................................................................................2611.001.00--------------------1.00----------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................TTCAGTCGTCCCAGACTGTGGAGTC................2511.001.00----------------------------------------------------------------------------------------------------------------1.00--------------------------------------------
..................................................................................................................................................TGGGGCTGGAGGTGGGGCTGAGGCG...............................................................................251.000.00-------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................CAGACTGTGGAGTCGAGTGGTTT.......2311.001.00--------------------------------------------------------------------------1.00----------------------------------------------------------------------------------
.....................................................................................................................................................................................CCCCTTCCTCCCTGCCCAGA.................................................201.000.00------------------------------------------------------1.00------------------------------------------------------------------------------------------------------
.............................................................................................................................................TAGGGTGGGGCTGGAGGTGGGGTAT....................................................................................251.000.00---1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................AGACTGTGGAGTCGAGTGGTTTGTATA..2711.002.00------------------------------1.00------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................AGGGTGGGGCTGGAGGTGGGGCTTT...................................................................................2511.008.00--1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................CCAGACTGTGGAGTCGAGTGGTTTG......2511.001.00-----------------------------------------------------------------1.00-------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................CAGACTGTGGAGTCGAGTG...........1911.001.00-----------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................GACTGTGGAGTCGAGTGGTTTGT.....2311.001.00---1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................TAGGGTGGGGCTGGAGGTGGGGCA.....................................................................................241.000.00------------------------------------------------------------------------------------1.00------------------------------------------------------------------------
..............................................................................................................................................AGGGTGGGGCTGGAGGTGGGGCA.....................................................................................2311.005.00-------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTCCCCTTCCTCCCTGCCCA...................................................2011.001.00----1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................AGGGTGGGGCTGGAGGTGGGGCTAAAA.................................................................................2711.008.00--------------------1.00----------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................AGGGTGGGGCTGGAGGTGGGGCTAAT..................................................................................2611.008.00--------------------------------------------------------------------------------------1.00----------------------------------------------------------------------
..............................................................................................................................................................................................................................GACTGTGGAGTCGAGTGGTTT.......2111.001.00---------------------------------------------------------------------------------1.00---------------------------------------------------------------------------
..................................................................................................................................................................................CCTCCCCTTCCTCCCTGCCCAGT.................................................231.000.00-----------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................CCCTTCCTCCCTGCCCAGT.................................................191.000.00----------------------------1.00--------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................AGGGTGGGGCTGGAGGTGAA........................................................................................201.000.00--1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................CCCTTCCTCCCTGCCCAGTT................................................201.000.00----------------------------------------1.00--------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................TAGGGTGGGGCTGGAGGTGGGGCAT....................................................................................251.000.00--------------------------------------------1.00----------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................AGACTGTGGAGTCGAGTGGTTT.......2211.001.00------------------------------------------------------------------1.00------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................GTCGTCCCAGACTGTGGAGTCGAGTGGTT........2911.001.00------------------------------------------------------------------------1.00------------------------------------------------------------------------------------
..............................................................................................................................................AGGGTGGGGCTGGAGGTGGGGCTAAA..................................................................................2611.008.00---1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................AGGGTGGGGCTGGAGGTGGGGTA.....................................................................................231.000.00-------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------
..............................................................................................................................................AGGGTGGGGCTGGAGGTGGGGCTA....................................................................................2411.008.00------------------------------------------------------------------------------1.00------------------------------------------------------------------------------
........................................................................................................................................................................................CTTCCTCCCTGCCCAGAAT...............................................191.000.00------------1.00------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................AGACTGTGGAGTCGAGTGGTTTGTAC...2611.001.00----------------------------------------------------------------------------1.00--------------------------------------------------------------------------------
..............................................................................................................................................AGGGTGGGGCTGGAGGTGA.........................................................................................191.000.00--1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................CCCAGACTGTGGAGTAGCG.............191.000.00--------------------------------------------------------------------------------1.00----------------------------------------------------------------------------
...................................................................................................................................................................................CTCCCCTTCCTCCCTGCCCAGTA................................................231.000.00-------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................CAGACTGTGGAGTCGAGTGGAA........221.000.00-----------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTCCCCTTCCTCCCTGCCCAGG.................................................2211.001.00-----------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................AGGGTGGGGCTGGAGGTGGGGCTTTTT.................................................................................2711.008.00--------------------------------------1.00----------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................CCCAGACTGTGGAGTGGTG.............191.000.00--------------------------------------------------------------------------------------------------------------------1.00----------------------------------------
..............................................................................................................................................AGGGTGGGGCTGGAGGTGT.........................................................................................191.000.00---------------------------------------------------------------------------------------------------------------1.00---------------------------------------------
................................................................................GCCTTCTACAGGGGAGAG........................................................................................................................................................181.000.00-----------------------------------------------------------------------------1.00-------------------------------------------------------------------------------
............................................................................................................................................................................................................................CAGACTGTGGAGTCGAGTGGTT........2211.001.00------------------1.00------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................AGGGTGGGGCTGGAGGTGGGGTAT....................................................................................241.000.00---1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................ACATTCAGTCGTCCCAGACT........................2011.001.00----------------------------------------------------------------------------------------------1.00--------------------------------------------------------------
....................................................................................................................................................................................TCCCCTTCCTCCCTGCCTAGA.................................................211.000.00--------------------------------------------------------1.00----------------------------------------------------------------------------------------------------
..................................................................................................................................................TGGGGCTGGAGGTGGGGCGGGT..................................................................................221.000.00--------------------------------------------------------------------1.00----------------------------------------------------------------------------------------
..................................................................................................................................................................................CCTCCCCTTCCTCCCTGCCCAGA.................................................231.000.00---------------------------1.00---------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................AGACTGTGGAGTCGAGTGG..........1911.001.00--------------------------1.00----------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................TAGGGTGGGGCTGGAGGTGGGGT......................................................................................231.000.00--------------------------------------------------1.00----------------------------------------------------------------------------------------------------------
.............................................................................................................................................TAGGGTGGGGCTGGAGGTGGGGCT.....................................................................................2411.001.00---------------------------------------------------------------------------------------------1.00---------------------------------------------------------------
....................................................................................................................................................................................TCCCCTTCCTCCCTGCCCATTT................................................2220.502.50-----------------------0.50-------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCCCCTTCCTCCCTGCCCAGTTC...............................................2320.505.00------------------------------------------------------------------------------------------------------------------------------------------0.50------------------
....................................................................................................................................................................................TCCCCTTCCTCCCTGCCCAGTCT...............................................2320.505.00-------0.50-----------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCCCCTTCCTCCCTGCCCAGTG................................................2220.505.00-------------------------------------------------------------------------------------------------------------------------------------------------0.50-----------
.............................................................................................................................................TAGGGTGGGGCTGGAGGTGGG........................................................................................2120.500.50--------------------0.50----------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................AGGGTGGGGCTGGAGGTGGG........................................................................................2040.500.50-------------------------------------------------0.25----------------0.25------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCCCCTTCCTCCCTGCCCAGCTAT..............................................2420.505.00-----------------------------------------------0.50-------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCCCCTTCCTCCCTGCCCAGTC................................................2220.505.00-----0.50-------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCCCCTTCCTCCCTGCCCAATC................................................2220.502.50------------------------------------------0.50------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCCCCTTCCTCCCTGCCCAAA.................................................2120.502.50-------------------0.50-----------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................TAGGGTGGGGCTGGAGGTGGGAAA.....................................................................................2420.500.50---0.50---------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCCCCTTCCTCCCTGCCCAA..................................................2020.502.50--------------------------------------------------------------------------------------------------------------------------------------0.50----------------------
.............................................................................................................................................TAGGGTGGGGCTGGAGGTG..........................................................................................1920.500.50----------------------------------------------------------------------------------------------------------------------------0.50--------------------------------
..............................................................................................................................................AGGGTGGGGCTGGAGGTGG.........................................................................................1940.250.25------------------------------------------------------------------------------------------------------------------------------------------------------------0.25
..............................................................................................................................................AGGGTGGGGCTGGAGGTGGAA.......................................................................................2140.250.25-----------------------------------------------------------------------------------------------------------------------------------------------------------0.25-

Antisense strand
ACATGAAAATGTTTTTCTAGGGTTGACACTGAGCAGTAAAAGTGCTGGGTTGAAGGGTTTCCAGCTTGCATTTGTACCTGGCCTTCTACAGGGGACAGGGGGCTATTTAGATGGTCCCCTGCCAACCCCAGTGGACAACCCTAGGGTGGGGCTGGAGGTGGGGCTGAGGCTGAGTCTTCCTCCCCTTCCTCCCTGCCCAGGGGTCCACATTCAGTCGTCCCAGACTGTGGAGTCGAGTGGTTTGTACACC
...............................................................................................................................................(((..(((..(((((.((((..(((((...)))))..))))))))).)))..)))....................................................
.........................................................................................................................................138...........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
TAX577741(Rovira)
total RNA. (breast)
SRR038863(GSM458546)
MM603. (cell line)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189782SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
TAX577746(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR040016(GSM532901)
G645N. (cervix)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029124(GSM416753)
HeLa. (hela)
SRR038861(GSM458544)
MM466. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
TAX577579(Rovira)
total RNA. (breast)
TAX577743(Rovira)
total RNA. (breast)
SRR038856(GSM458539)
D11. (cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191580(GSM715690)
103genomic small RNA (size selected RNA from . (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR040018(GSM532903)
G701N. (cervix)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577590(Rovira)
total RNA. (breast)
SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189786DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR029129(GSM416758)
SW480. (cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR040039(GSM532924)
G531T. (cervix)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR189784GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM339995(GSM339995)
hues6NP. (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR038854(GSM458537)
MM653. (cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038859(GSM458542)
MM386. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR040010(GSM532895)
G529N. (cervix)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR191449(GSM715559)
144genomic small RNA (size selected RNA from . (breast)
TAX577740(Rovira)
total RNA. (breast)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR038860(GSM458543)
MM426. (cell line)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038858(GSM458541)
MEL202. (cell line)
SRR040032(GSM532917)
G603N. (cervix)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577739(Rovira)
total RNA. (breast)
SRR191422(GSM715532)
129genomic small RNA (size selected RNA from . (breast)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR191558(GSM715668)
61genomic small RNA (size selected RNA from t. (breast)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)
SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)
SRR191393(GSM715503)
22genomic small RNA (size selected RNA from t. (breast)
SRR040014(GSM532899)
G623N. (cervix)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR040020(GSM532905)
G699N_2. (cervix)
TAX577588(Rovira)
total RNA. (breast)
SRR191432(GSM715542)
169genomic small RNA (size selected RNA from . (breast)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR191466(GSM715576)
114genomic small RNA (size selected RNA from . (breast)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR040029(GSM532914)
G026T. (cervix)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR191576(GSM715686)
86genomic small RNA (size selected RNA from t. (breast)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
...................................................................................TTCTACAGGGGACAGGGG..................................................................................................................................................... 1813.003.00--------3.00----------------------------------------------------------------------------------------------------------------------------------------------------
.............................TGAGCAGTAAAAGTGCTTTT......................................................................................................................................................................................................... 201.000.00------------------------1.00------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................CCTTCCTCCCTGCCCAT.................................................. 171.000.00-------------------------------------------------------------------------------------------------------1.00-----------------------------------------------------
............................................................................................................................................................GGTGGGGCTGAGGCTGAACGA......................................................................... 211.000.00-----------------------------------------------------------------------1.00-------------------------------------------------------------------------------------
...............................................GGTTGAAGGGTTTCCATCAG....................................................................................................................................................................................... 201.000.00-------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------
............................................................................................................................................................................AGTCTTCCTCCCCTTCCT............................................................ 1830.330.33-----------------------------------------------------------------0.33-------------------------------------------------------------------------------------------
..................................................................................................................................................................................................GCCCAGGGGTCCACA......................................... 1580.120.12-------------------------------------------------------------------0.12-----------------------------------------------------------------------------------------