ID: hsa-mir-6737
GENE: SLC39A1(1)
chr1:153934777-153935054-


(1)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(5)
AGO2.ip
(1)
AGO3.ip
(2)
B-CELL
(2)
BRAIN
(21)
BREAST
(35)
CELL-LINE
(7)
CERVIX
(3)
FIBROBLAST
(9)
HEART
(5)
HELA
(2)
LIVER
(2)
OTHER
(55)
SKIN
(1)
XRN.ip

Sense strand
GGTGCCCATCTGTGTGCTGCGCCGGCCAGGAGCTAACCATGAAGGCTCAGGTAAGCCTCTCCTTTTCCCCACACTGCTATGAATGCTTGGCTTAGGGAGGGCTCTGGGGCTGGCGGGGAGTGACCAAAGGAGGAGGGAAAGGCAAGGGTAGCCATTGTTTGGGTTGGGGTGGTCGGCCCTGGAGGGGGTTTGTTTGCTTATTCCCCTCTGTGCTTCACCCCTACCCAGCTTCCCGCCAGAAAGCCCTGAGCCTAGTAAGCTGTTTCGCGGGGGGCGTC
...............................................................................................................................................................(((((.(((((((..(((...((((((((.............))))))))..)))))))))).)))))...................................................
..............................................................................................................................................................159..................................................................228................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR189782SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
TAX577741(Rovira)
total RNA. (breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR029124(GSM416753)
HeLa. (hela)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR037938(GSM510476)
293Red. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR040028(GSM532913)
G026N. (cervix)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR189785SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040034(GSM532919)
G001N. (cervix)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR189786GSM532929(GSM532929)
G702N. (cervix)
SRR040007(GSM532892)
G601T. (cervix)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
TAX577739(Rovira)
total RNA. (breast)
SRR189783SRR191422(GSM715532)
129genomic small RNA (size selected RNA from . (breast)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)
SRR191561(GSM715671)
80genomic small RNA (size selected RNA from t. (breast)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR040018(GSM532903)
G701N. (cervix)
SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)
SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029127(GSM416756)
A549. (cell line)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR191623(GSM715733)
18genomic small RNA (size selected RNA from t. (breast)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR029131(GSM416760)
MCF7. (cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR040014(GSM532899)
G623N. (cervix)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR207117(GSM721079)
Whole cell RNA. (cell line)
SRR038856(GSM458539)
D11. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR029126(GSM416755)
143B. (cell line)
TAX577746(Rovira)
total RNA. (breast)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR191430(GSM715540)
167genomic small RNA (size selected RNA from . (breast)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR040037(GSM532922)
G243T. (cervix)
SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCCAGT.................................................231227.0044.007.0012.003.008.00-5.008.005.005.008.005.002.002.008.00-3.004.001.007.00-4.002.003.005.005.003.001.002.00-1.00-1.003.002.003.003.00-3.002.001.00-4.00-4.003.001.004.002.003.002.001.002.001.001.002.00-2.002.003.001.001.001.001.001.002.002.003.003.002.00-1.001.001.002.002.001.00--1.00-----1.00--1.001.00----1.00--1.00----1.001.00-1.00-1.001.00-1.001.00--1.001.001.00--1.00-1.00-1.001.00--1.00---1.001.001.001.001.00-1.00---------1.00-
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCCAGA.................................................231129.0044.001.005.001.002.0011.004.003.00-5.002.002.00-4.001.00-1.001.002.00---2.003.001.001.001.002.003.00-1.003.002.002.002.001.00--1.002.002.002.00-3.00-1.003.00--1.002.002.001.001.002.001.002.00-1.00-1.001.001.00-2.001.001.00-----1.001.00--1.001.00--1.00-2.001.00-1.002.00--1.00---1.00-1.00---1.00-1.00----1.00------------------1.00--1.001.001.00-----1.00--1.001.00--1.001.00----
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCCAG..................................................22144.0044.006.001.009.002.00-1.002.00-2.00-1.00-1.00-4.00-1.00---1.002.00----1.00--2.00-------------------------1.001.00----1.001.00-------------------1.00----1.00---------1.00--------------1.00-----------------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCCAGTA................................................24113.0044.001.00--1.00-------1.00---1.001.001.00--1.00----1.00----1.00---1.00------------1.00-----------------------------2.00----------------------------------------------------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCCAGC.................................................23111.0011.001.00----3.00-----1.00---1.00----1.00-----1.00---1.00--------------------------------------1.00-------------------------------------------------------1.00----------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCCA...................................................2119.009.00-----1.001.001.00------1.00----------------1.00---------------------------1.00-----------------------2.00-------------------------------------1.00--------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCCAGTT................................................2417.0044.00-----------1.002.00------------------1.00------------------------------1.00-------------1.00-1.00---------------------------------------------------------------------
...................................................................................................................................................................TTGGGGTGGTCGGCCCTGGAG..............................................................................................2115.005.00---1.00----------------------1.00--1.00--------------------------------------------------1.00--------------------------------------1.00----------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCCATT.................................................2315.009.00-1.00---1.00--1.00-------------------------------------------1.00------------------------------------------------------------------------------------1.00----------
...................................................................................................................................................................TTGGGGTGGTCGGCCCTGGAGGATC..........................................................................................2514.003.00-------------------4.00--------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................CGCCAGAAAGCCCTGAGCC..........................1914.004.00-------3.00----------------------------------1.00---------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACC.....................................................1914.004.00----------2.00-----------------------------2.00-----------------------------------------------------------------------------------------------------------
..................................................................................................................................................................GTTGGGGTGGTCGGCCCTGGAGG.............................................................................................2314.004.003.00----------1.00----------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................TTGGGGTGGTCGGCCCTGGAGGGGAT.........................................................................................263.000.00----3.00-----------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................CCCCTACCCAGCTTCCCGCCAGAAAGCCCTGAGC...........................3413.003.00----------------------------3.00-----------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCC....................................................2013.003.00--1.001.00---1.00--------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................TTGGGGTGGTCGGCCCTGGAGG.............................................................................................2213.003.00-----------------1.00-------1.00-----------------------------------------------------------------------------1.00--------------------------------------------
...................................................................................................................................................................TTGGGGTGGTCGGCCCTGGAGATC...........................................................................................2413.005.00-------------------3.00--------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................TGGGTTGGGGTGGTCGGCCCTGGAGG.............................................................................................2613.003.00---1.00-------1.00--------------------------------------------------------------------------1.00-------------------------------------------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTAC......................................................1812.002.00-1.00-----1.00--------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................TTGGGTTGGGGTGGTCGGCCCTG.................................................................................................2312.002.00----2.00-----------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................CTCTGTGCTTCACCCCTACCC....................................................2112.002.00------------------------------------2.00---------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................CTCTGTGCTTCACCCCTACCCAGT.................................................242.000.00------------------------------------2.00---------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................TGGGGTGGTCGGCCCTGGAAGA............................................................................................2211.001.00---------------1.00------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCCAAAT................................................2411.009.00-----------------1.00----------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................CCTGAGCCTAGTAAGCTGTTTCGCGGGGGGC...3111.001.00---------------------------------1.00------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................GTTGGGGTGGTCGGCCCTGGAGGA............................................................................................2411.004.001.00---------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................GACCAAAGGAGGAGGTATG..........................................................................................................................................191.000.00-------------------------------------------------------------------------------------------------------------------------------------------------1.00--
..................................................................................................................................................................GTTGGGGTGGTCGGCCCTGGAG..............................................................................................2211.001.00---1.00------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCCAGGGGG..............................................2611.0044.00--1.00-------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................TTGGGTTGGGGTGGTCGGCCCTGGAGG.............................................................................................2711.001.00-----------1.00----------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................CCGCCAGAAAGCCCTGAGCC..........................2011.001.00-------1.00--------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................TGTGCTTCACCCCTACCCAGTTT...............................................231.000.00------------------------------------------------------------------------------------------------------------------------------------------------1.00---
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTA.......................................................1711.001.00---------------1.00------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCCAGTAC...............................................2511.0044.00---------------------------------------------------------------------------------------------------------------------1.00------------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCCAT..................................................2211.009.00--1.00-------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................TTGGGGTGGTCGGCCCTGGAGGGGTTTT.......................................................................................281.000.00-----------------------------------------------------------------------------------------------1.00----------------------------------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCCACG.................................................2311.009.00--------------------------------------------------------------------1.00-------------------------------------------------------------------------------
..............................................................................................................................................................TTGGGTTGGGGTGGTGCG......................................................................................................181.000.00-------------------------------------------------------------------------------1.00--------------------------------------------------------------------
......CATCTGTGTGCTGCGCCGGCCAGG........................................................................................................................................................................................................................................................2411.001.00----------------------------1.00-----------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCCCG..................................................2211.003.00-1.00--------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................CCCTCTGTGCTTCACCCCTATT.....................................................221.000.00------------------------------------------------------------1.00---------------------------------------------------------------------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCACCC.....................................................191.000.00--------------1.00-------------------------------------------------------------------------------------------------------------------------------------
................CTGCGCCGGCCAGGAGCTAACCATGAAGGCTCA.....................................................................................................................................................................................................................................3311.001.00----------------------------1.00-----------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCCAA..................................................2211.009.00-----------------------------------------------1.00----------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................AGCCTAGTAAGCTGTTTCGCGGG.......2311.001.00-----------------------------------1.00----------------------------------------------------------------------------------------------------------------
..................GCGCCGGCCAGGAGCG....................................................................................................................................................................................................................................................161.000.001.00---------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCTAGA.................................................2311.004.00---------------------------------------------------------------------------------------------------------------1.00------------------------------------
....................................................................................................................................................................TGGGGTGGTCGGCCCTGGAG..............................................................................................2011.001.00---1.00------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................CTGTGCTTCACCCCTACCCAGTT................................................231.000.00------------------------------------------------------------------------------------------------------------1.00---------------------------------------
.....................................................................................................CTCTGGGGCTGGCGGGCTG..............................................................................................................................................................191.000.00---------------------------------------------------------------------------------------------------------------------------------------------1.00------
.GTGCCCATCTGTGTGCTGCGCCGGCCAGGAGC.....................................................................................................................................................................................................................................................3211.001.00-------------------------------------------------------------------------------------------1.00--------------------------------------------------------
.....CCATCTGTGTGCTGCGCCGGCC...........................................................................................................................................................................................................................................................2211.001.00--------------------------------------------------------------------------------------1.00-------------------------------------------------------------
................................................................................................................................................................................................................TGTGCTTCACCCCTACCCA...................................................1911.001.00--------------------------------------------------------------------------------------------------------------------------------------------1.00-------
...................................................................................................................................................................TTGGGGTGGTCGGCCCTGGAGGGGTT.........................................................................................261.000.001.00---------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACTCAG..................................................2211.002.00--1.00-------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................GGGCTGGCGGGGAGTGACCAAAGGAG..................................................................................................................................................2611.001.00---------------------------------------1.00------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................TGGGGTGGTCGGCCCTGGAGG.............................................................................................2111.001.001.00---------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................TTGGGGTGGTCGGCCCTGGAGGA............................................................................................2311.003.00-----------1.00----------------------------------------------------------------------------------------------------------------------------------------
.....CCATCTGTGTGCTGCGCCGGC............................................................................................................................................................................................................................................................2111.001.00------------------------------------------------------------------------------------------1.00---------------------------------------------------------
................CTGCGCCGGCCAGGAGCCAAC.................................................................................................................................................................................................................................................211.000.00--------------1.00-------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................TGGGGTGGTCGGCCCTGGAGGG............................................................................................2211.001.00----------------------------------------------------------------------1.00-----------------------------------------------------------------------------
.............................................................................................AGGGAGGGCTCTGGGGTGTA.....................................................................................................................................................................201.000.00-----------------------------------------------------------------------------------------1.00----------------------------------------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCCCGA.................................................2311.003.00-----------------1.00----------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCCAGTAA...............................................2511.0044.00-------1.00--------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................GTTTCGCGGGGGGCGCA171.000.001.00---------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................TGGGGTGGTCGGCCCTGGA...............................................................................................1911.001.00---1.00------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................GTTTCGCGGGGGGCGTCTTC201.000.00---------------------------------------------------------------------1.00------------------------------------------------------------------------------
............................................................................................................................................................................................................................................CAGAAAGCCCTGAGCC..........................1630.330.33---------------------------------------------------------------------------------------------------------------------------------------------------0.33
.......................................................................................................................................................................................................................................................................TTCGCGGGGGGCG..1350.200.20---------------------------0.20------------------------------------------------------------------------------------------------------------------------

Antisense strand
GGTGCCCATCTGTGTGCTGCGCCGGCCAGGAGCTAACCATGAAGGCTCAGGTAAGCCTCTCCTTTTCCCCACACTGCTATGAATGCTTGGCTTAGGGAGGGCTCTGGGGCTGGCGGGGAGTGACCAAAGGAGGAGGGAAAGGCAAGGGTAGCCATTGTTTGGGTTGGGGTGGTCGGCCCTGGAGGGGGTTTGTTTGCTTATTCCCCTCTGTGCTTCACCCCTACCCAGCTTCCCGCCAGAAAGCCCTGAGCCTAGTAAGCTGTTTCGCGGGGGGCGTC
...............................................................................................................................................................(((((.(((((((..(((...((((((((.............))))))))..)))))))))).)))))...................................................
..............................................................................................................................................................159..................................................................228................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR189782SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
TAX577741(Rovira)
total RNA. (breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR029124(GSM416753)
HeLa. (hela)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR037938(GSM510476)
293Red. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR040028(GSM532913)
G026N. (cervix)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR189785SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040034(GSM532919)
G001N. (cervix)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR189786GSM532929(GSM532929)
G702N. (cervix)
SRR040007(GSM532892)
G601T. (cervix)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
TAX577739(Rovira)
total RNA. (breast)
SRR189783SRR191422(GSM715532)
129genomic small RNA (size selected RNA from . (breast)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)
SRR191561(GSM715671)
80genomic small RNA (size selected RNA from t. (breast)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR040018(GSM532903)
G701N. (cervix)
SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)
SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029127(GSM416756)
A549. (cell line)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR191623(GSM715733)
18genomic small RNA (size selected RNA from t. (breast)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR029131(GSM416760)
MCF7. (cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR040014(GSM532899)
G623N. (cervix)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR207117(GSM721079)
Whole cell RNA. (cell line)
SRR038856(GSM458539)
D11. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR029126(GSM416755)
143B. (cell line)
TAX577746(Rovira)
total RNA. (breast)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR191430(GSM715540)
167genomic small RNA (size selected RNA from . (breast)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR040037(GSM532922)
G243T. (cervix)
SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...........................................................................GCTATGAATGCTTGGCG.......................................................................................................................................................................................... 171.000.00--------------------------------------------------------------------------------1.00-------------------------------------------------------------------
.......ATCTGTGTGCTGCGCATGG............................................................................................................................................................................................................................................................ 191.000.00--1.00-------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................GCTATGAATGCTTGGCGA......................................................................................................................................................................................... 181.000.00--------------------------------------------------------------------------------------------------------------------1.00-------------------------------
...............................................................................................................................................................................................................................CCCAGCTTCCCGCCACA...................................... 171.000.00---------------------------------------------------------------------------------------------------1.00------------------------------------------------
.......ATCTGTGTGCTGCGCAGTC............................................................................................................................................................................................................................................................ 191.000.00--------------1.00-------------------------------------------------------------------------------------------------------------------------------------
.......................................................CCTCTCCTTTTCCCCAAGGG........................................................................................................................................................................................................... 201.000.00--1.00-------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................CTATGAATGCTTGGC........................................................................................................................................................................................... 1550.200.20---------------------0.20------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................ACCCAGCTTCCCGC.......................................... 1490.110.11--0.11-------------------------------------------------------------------------------------------------------------------------------------------------