ID: hsa-mir-4722
GENE: FAM38A(2)
chr16:88782636-88782818-


(1)
AGO1.ip 		(3)
AGO2.ip 		(13)
B-CELL 		(1)
BRAIN 		(6)
BREAST 		(44)
CELL-LINE 		(3)
CERVIX 		(2)
FIBROBLAST 		(1)
HEART 		(7)
HELA 		(3)
LIVER 		(2)
OTHER 		(2)
RRP40.ip 		(26)
SKIN 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
GCACGGCGGCAGCTGGCCAGCCTGCTCGAGGGCACCTCGGACCAGTCTGTGTGAGTGAAGGGCCCGGGTGGTGGGCAGGAGGGCTGTGCCAGGTTGGCTGGGCCAGGCCTGACCTGCCAGCACCTCCCTGCAGGGTCATCCCTAATCTCTTCCCCAAGTACATCCGTGCCCCCAACGGGCCCG
..........................................................................((((((((((((.((.(((((((((......)))).))))))))))).))))).)))....................................................
........................................................................73..........................................................133................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR038857(GSM458540)
D20. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR189782SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR038854(GSM458537)
MM653. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR038863(GSM458546)
MM603. (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038855(GSM458538)
D10. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038861(GSM458544)
MM466. (cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		SRR038862(GSM458545)
MM472. (cell line)		GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR040010(GSM532895)
G529N. (cervix)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		GSM532884(GSM532884)
G871T. (cervix)		SRR037937(GSM510475)
293cand2. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR029124(GSM416753)
HeLa. (hela)		TAX577580(Rovira)
total RNA. (breast)		GSM359180(GSM359180)
hela_phil_smrna_cyto. (hela)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR040037(GSM532922)
G243T. (cervix)		SRR189787SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)		SRR038860(GSM458543)
MM426. (cell line)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
.........................................................................................CAGGTTGGCTGGGCCAGGC...........................................................................19178.0078.00--9.00-3.001.001.002.006.00-5.002.002.00-2.00-----1.003.003.00-----3.004.00-3.00--1.00-2.00-1.00-1.00--3.00-3.001.001.001.00-2.00----1.002.00-----1.00--------1.001.00---1.00--1.001.00---------1.001.00------------1.00--------
..........................................................................................AGGTTGGCTGGGCCAGGC...........................................................................18144.0044.0012.00-5.00-2.00--2.002.00-1.002.00------3.00-4.00-1.00--1.00--1.00-1.00----------1.00------------2.00---2.00-----------------------1.00-----------------------1.00------
.................................ACCTCGGACCAGTCTGT.....................................................................................................................................17125.0025.0017.00-1.00----2.00---1.00------1.00---1.00-----------------2.00------------------------------------------------------------------------
.........................................................................GGCAGGAGGGCTGTGCCAGGTTGT......................................................................................24124.0023.00------1.00--4.00---3.00--2.00-------4.00------------1.001.001.00--1.00-1.00--------1.00-----1.00---1.00---------------------1.00--1.00------------------------
.........................................................................GGCAGGAGGGCTGTGCCAGGTTG.......................................................................................23123.0023.00---2.003.002.001.00--3.00--1.00---2.00--2.00------1.001.00----1.00-----------1.00----1.00--1.00-------1.00----------------------------------------------------
.........................................................................GGCAGGAGGGCTGTGCCAGGTT........................................................................................22115.0015.00---3.00-1.00---------2.00---1.00---2.00---1.00------1.00------2.00-------1.00----------1.00----------------------------------------------------
.........................................................................GGCAGGAGGGCTGTGCCAGGT.........................................................................................21113.0013.00---9.00-----------1.00-1.001.00-------------1.00--------------------------------------------------------------------------------
.........................................................................GGCAGGAGGGCTGTGCCAGGTTGA......................................................................................24110.0023.00-----2.003.00------2.00-----1.00----------------1.00--------------------1.00-------------------------------------------------------
.........................................................................GGCAGGAGGGCTGTGCCAGGTTAA......................................................................................2418.0015.00------1.00-----1.00--1.00----------3.00------------------------1.00-------------------------------------------------1.00-----------
..............................................................................GAGGGCTGTGCCAGGTTGT......................................................................................1918.004.00-8.00---------------------------------------------------------------------------------------------------------------
.........................................................................GGCAGGAGGGCTGTGCCAGGTTT.......................................................................................2317.0015.00------1.00-----1.00--------------1.00--------------1.00-------------------------------------------------1.00--1.00--1.00--------------
...........................................................................................GGTTGGCTGGGCCAGGC...........................................................................1716.006.00-------1.00---1.00---------1.00---1.00-----1.00--------------------------------------1.00------------------------------------------
...............................................................................AGGGCTGTGCCAGGTTG.......................................................................................1715.005.00-5.00---------------------------------------------------------------------------------------------------------------
................................CACCTCGGACCAGTCTGT.....................................................................................................................................1815.005.00--1.00----1.00---------1.00----------------------------------------------1.00------------------------------------------1.00-----
.........................................................................GGCAGGAGGGCTGTGCCAGG..........................................................................................2014.004.00---1.00-----------1.00-----------1.00----1.00--------------------------------------------------------------------------------
.............................................................................GGAGGGCTGTGCCAGGTTGTTT....................................................................................2214.002.00-4.00---------------------------------------------------------------------------------------------------------------
.........................................................................GGCAGGAGGGCTGTGCCAGGTTGAA.....................................................................................2514.0023.00-----1.00---1.00---------------------------1.001.00--------------------------------------------------------------------------
.......................................................TGAAGGGCCCGGGTGGTGGGCAGGAGGGC...................................................................................................2914.004.00-------------------------1.00---------------------2.00---------------------------------------------------------1.00-------
..............................................................................GAGGGCTGTGCCAGGTTG.......................................................................................1814.004.00-4.00---------------------------------------------------------------------------------------------------------------
...........................................................................CAGGAGGGCTGTGCCAGGTTGG......................................................................................2212.002.00---------------1.00----------------------------1.00--------------------------------------------------------------------
..............................................................................................................................................TAATCTCTTCCCCAAGTACATCC..................2312.002.00-----------------2.00-----------------------------------------------------------------------------------------------
...............................................................................................................ACCTGCCAGCACCTCCCTGCAGT.................................................2312.001.00------------------------------------------------------------------------------------1.00---------1.00------------------
....................................................................TGGTGGGCAGGAGGGCTGTGC..............................................................................................2112.002.00---------------------------------------1.00------1.00------------------------------------------------------------------
..........................................................AGGGCCCGGGTGGTGGGCAGGAGGGCTGTGC..............................................................................................3112.002.00--------------2.00--------------------------------------------------------------------------------------------------
.........................................................................GGCAGGAGGGCTGTGCCAGGTTAT......................................................................................2412.0015.00-----------------------------------2.00-----------------------------------------------------------------------------
.........................................................................GGCAGGAGGGCTGTGCCAG...........................................................................................1912.002.00--------------------------------1.00--------------------------------------------1.00-----------------------------------
.........................................................................GGCAGGAGGGCTGTGCCAGGTTGAT.....................................................................................2512.0023.00---------------------------------------------------1.00-----------------------1.00-------------------------------------
................................................................................................................CCTGCCAGCACCTCCCTGCAGGGT...............................................2412.002.00-------------------------2.00---------------------------------------------------------------------------------------
.............................................................................GGAGGGCTGTGCCAGGTTG.......................................................................................1912.002.00-2.00---------------------------------------------------------------------------------------------------------------
....................................................................................................................................................CTTCCCCAAGTACATCCGTGCCCCC..........2512.002.00--------------2.00--------------------------------------------------------------------------------------------------
.........................................................................GGCAGGAGGGCTGTGCCAGGTTGTTTT...................................................................................2712.0023.00-----------------------2.00-----------------------------------------------------------------------------------------
.........................................................................................CAGGTTGGCTGGGCCAGGCA..........................................................................2012.0078.00----1.00-----------------------------1.00------------------------------------------------------------------------------
.......................................................TGAAGGGCCCGGGTGGTGGGCAGGAGGGCTGTGC..............................................................................................3412.002.00-----------1.00---------------------------------------------1.00-------------------------------------------------------
......................TGCTCGAGGGCACCTCGGACCAGTCTGT.....................................................................................................................................2812.002.00--2.00--------------------------------------------------------------------------------------------------------------
.........................................................................GGCAGGAGGGCTGTGCCAGGTTA.......................................................................................2312.0015.00----------------2.00------------------------------------------------------------------------------------------------
..................................................GTGAGTGAAGGGCCCGGGTGGTGGGCAGGAGGGCTGTGCCAGGTTGGCTGGGCCAGGCCTGACCTGCCAGCACCTCCCTGCAGA.................................................842.000.00------------------------------2.00----------------------------------------------------------------------------------
...........................................................................CAGGAGGGCTGTGCCAGGTTG.......................................................................................2112.002.00-----------------2.00-----------------------------------------------------------------------------------------------
.........................................................................GGCAGGAGGGCTGTGCCAGGGTGT......................................................................................2412.004.00-----------------------------------1.00-----------------1.00-----------------------------------------------------------
.........................................................................GGCAGGAGGGCTGTGCCAGGTTGTAA....................................................................................2611.0023.00-------------------1.00---------------------------------------------------------------------------------------------
..........................................................AGGGCCCGGGTGGTGGGC...........................................................................................................1811.001.00-------------------------------------1.00---------------------------------------------------------------------------
...........................................................GGGCCCGGGTGGTGGGCAGGAGGGCTGTGC..............................................................................................3011.001.00--------------------------------------------------------------------1.00--------------------------------------------
.........................................................................GGCAGGAGGGCTGTGCCAGGTTAAT.....................................................................................2511.0015.00------------1.00----------------------------------------------------------------------------------------------------
...................................CTCGGACCAGTCTGTGG...................................................................................................................................171.000.00--------1.00--------------------------------------------------------------------------------------------------------
......................TGCTCGAGGGCACCTCGGACCA...........................................................................................................................................2211.001.00---1.00-------------------------------------------------------------------------------------------------------------
.........................................................................GGCAGGAGGGCTGTGCCAGGAA........................................................................................2211.004.00----------------------------------1.00------------------------------------------------------------------------------
............................AGGGCACCTCGGACCAG..........................................................................................................................................1711.001.00------------------1.00----------------------------------------------------------------------------------------------
.............................................................................................TTGGCTGGGCCAGGC...........................................................................1501.001.00---------------------1.00-------------------------------------------------------------------------------------------
..............................................................................................................GACCTGCCAGCACCTCCCTG.....................................................2011.001.00---------------------------------1.00-------------------------------------------------------------------------------
................................CACCTCGGACCAGTCTG......................................................................................................................................1711.001.00-----------------------------------------------------------------1.00-----------------------------------------------
..................................................................GGTGGTGGGCAGGAGGGCTGTAA..............................................................................................231.000.00-------------------------------------------------------------------------1.00---------------------------------------
.........................................................................GGCAGGAGGGCTGTGCCAGGTTATAA....................................................................................2611.0015.00--------------------------1.00--------------------------------------------------------------------------------------
.........................................................................GGCAGGAGGGCTGTGCCAGGTTGAG.....................................................................................2511.0023.00----------------------------------------------------1.00------------------------------------------------------------
.........................................................AAGGGCCCGGGTGGTGGGCAGGAGGG....................................................................................................2611.001.00-----------------------------------------------------------------------------------------1.00-----------------------
.............TGGCCAGCCTGCTCGAGGGC......................................................................................................................................................2011.001.00------------------------------------------------1.00----------------------------------------------------------------
.........................................................................GGCAGGAGGGCTGTGCCAGT..........................................................................................2011.002.00---1.00-------------------------------------------------------------------------------------------------------------
......................TGCTCGAGGGCACCTCGGACCAG..........................................................................................................................................2311.001.00---------------------------------------------------------------------1.00-------------------------------------------
........GCAGCTGGCCAGCCTGCTCGAGG........................................................................................................................................................2311.001.00------------------------------------------------------------------------------1.00----------------------------------
.....................................................................GGTGGGCAGGAGGGCTGTGC..............................................................................................2011.001.00---------------------------------------1.00-------------------------------------------------------------------------
.........................................................................................CAGGTTGGCTGGGCCAGGCAA.........................................................................2111.0078.00------------1.00----------------------------------------------------------------------------------------------------
...............................................................................................................ACCTGCCAGCACCTCCCTGCAG..................................................2211.001.00---------------------------------1.00-------------------------------------------------------------------------------
.........................................................................GGCAGGAGGGCTGTGCCAGTAA........................................................................................2211.002.00----1.00------------------------------------------------------------------------------------------------------------
.........CAGCTGGCCAGCCTGCTCGAGG........................................................................................................................................................2211.001.00-----------------------------------------------------------------------------------1.00-----------------------------
..................................................................GGTGGTGGGCAGGAGGGCTG.................................................................................................2011.001.00-------------------------------------------------------1.00---------------------------------------------------------
.........................................................................................CAGGTTGGCTGGGCCAGG............................................................................1811.001.00-------1.00---------------------------------------------------------------------------------------------------------
.........................................................................GGCAGGAGGGCTGTGCCAGA..........................................................................................2011.002.00--1.00--------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGAAGGGCCCGGGTGGT...............................................................................................................2211.001.00------------------------------------------------------------------1.00----------------------------------------------
.............................................................................GGAGGGCTGTGCCAGGTTGGCTGGGC................................................................................2611.001.00----------------------------------------------1.00------------------------------------------------------------------
...............................................................................................................ACCTGCCAGCACCTCCCTGC....................................................2011.001.00---------------------------------1.00-------------------------------------------------------------------------------
.........................................................................GGCAGGAGGGCTGTGCCAGGTTGC......................................................................................2411.0023.00-----1.00-----------------------------------------------------------------------------------------------------------
.................................................................GGGTGGTGGGCAGGAGGGC...................................................................................................1911.001.00-------------------------------------------------------------1.00---------------------------------------------------
.........................................................................GGCAGGAGGGCTGTGCCAGGTTGG......................................................................................2411.001.00------------------------------------------1.00----------------------------------------------------------------------
.........................................................................GGCAGGAGGGCTGTGCCAGGTCGT......................................................................................2411.0013.00----------------------------------------------------------------------------------------------------1.00------------
.........................................................................GGCAGGAGGGCTGTGCCAGGTTGTA.....................................................................................2511.0023.00------------------------1.00----------------------------------------------------------------------------------------
.......................................................TGAAGGGCCCGGGTGGTGGGC...........................................................................................................2111.001.00--1.00--------------------------------------------------------------------------------------------------------------
.........................................................................GGCAGGAGGGCTGTGCCAGGTAT.......................................................................................2311.0013.00-------------1.00---------------------------------------------------------------------------------------------------
.........................................................................GGCAGGAGGGCTGTGCGGC...........................................................................................191.000.00---------------------------------------------------------------------------------------------------1.00-------------
.........................................................................GGCAGGAGGGCTGTGCCAGGTTGGTTT...................................................................................2711.001.00-----------------------1.00-----------------------------------------------------------------------------------------
.....................................................................GGTGGGCAGGAGGGCTGTGCC.............................................................................................2111.001.00-------------------------------------------------------------------------------------------------------1.00---------
........................................................................GGGCAGGAGGGCTGTGCCAGGTTGGC.....................................................................................2611.001.00------------------------------------------------------------------------------------------------1.00----------------
.........................................................................GGCAGGAGGGCTGTGCCAGGAAA.......................................................................................2311.004.00--------------------------------------------------------------------------1.00--------------------------------------
.........................................................................GGCAGGAGGGCTGTGCCAGGTTAAAT....................................................................................2611.0015.00-----1.00-----------------------------------------------------------------------------------------------------------
.............................................................................GGAGGGCTGTGCCAGGTTGGCTGGGCAA..............................................................................2811.001.00---------------------------------------------------------------------------------------------1.00-------------------
....................................................GAGTGAAGGGCCCGGGTGGTGGGCAGGAGGGCTGTGC..............................................................................................3711.001.00------------------------------1.00----------------------------------------------------------------------------------
.........................................................................GGCAGGAGGGCTGTGCCAGGTTGTTT....................................................................................2611.0023.00-----1.00-----------------------------------------------------------------------------------------------------------
...................................................................GTGGTGGGCAGGAGGGCTG.................................................................................................1911.001.00------1.00----------------------------------------------------------------------------------------------------------
.........................................................................GGCAGGAGGGCTGTGCCAGGTAAT......................................................................................2411.0013.00-----------------------------------1.00-----------------------------------------------------------------------------
.........................................................................GGCAGGAGGGCTGTGCCAGGTTGAAT....................................................................................2611.0023.00-----------------------------------------------------------1.00-----------------------------------------------------
.........................................................................GGCAGGAGGGCTGTGCCAGGTTTA......................................................................................2411.0015.00---------------------------------------------------------------------------------1.00-------------------------------
.........................................................................GGCAGGAGGGCTGTGCCA............................................................................................1811.001.00--------------------------------------------------------------------------------------1.00--------------------------
.........................................................................GGCAGGAGGGCTGTGCCAGGTA........................................................................................2211.0013.00------------------------------------------------------------------------------------------------------1.00----------
.......................................................................TGGGCAGGAGGGCTGTGC..............................................................................................1820.500.50------------------------------------------------------------------------------------------------------------0.50----
....................................................................TGGTGGGCAGGAGGGCTG.................................................................................................1820.500.50------0.50----------------------------------------------------------------------------------------------------------
.......................................................................TGGGCAGGAGGGCTGTG...............................................................................................1740.250.25-------------------------------------------------------------------------------------------------------------0.25---
..............................................................................GAGGGCTGTGCCAGGT.........................................................................................1650.200.20--------------------------------------------------------------------------------------------------------------0.20--
......................................................................GTGGGCAGGAGGGCTGT................................................................................................1750.200.20------0.20----------------------------------------------------------------------------------------------------------

Antisense strand
GCACGGCGGCAGCTGGCCAGCCTGCTCGAGGGCACCTCGGACCAGTCTGTGTGAGTGAAGGGCCCGGGTGGTGGGCAGGAGGGCTGTGCCAGGTTGGCTGGGCCAGGCCTGACCTGCCAGCACCTCCCTGCAGGGTCATCCCTAATCTCTTCCCCAAGTACATCCGTGCCCCCAACGGGCCCG
..........................................................................((((((((((((.((.(((((((((......)))).))))))))))).))))).)))....................................................
........................................................................73..........................................................133................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR038857(GSM458540)
D20. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR189782SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR038854(GSM458537)
MM653. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR038863(GSM458546)
MM603. (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038855(GSM458538)
D10. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038861(GSM458544)
MM466. (cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		SRR038862(GSM458545)
MM472. (cell line)		GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR040010(GSM532895)
G529N. (cervix)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		GSM532884(GSM532884)
G871T. (cervix)		SRR037937(GSM510475)
293cand2. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR029124(GSM416753)
HeLa. (hela)		TAX577580(Rovira)
total RNA. (breast)		GSM359180(GSM359180)
hela_phil_smrna_cyto. (hela)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR040037(GSM532922)
G243T. (cervix)		SRR189787SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)		SRR038860(GSM458543)
MM426. (cell line)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
...........................................................GGGCCCGGGTGGTGGCTCT......................................................................................................... 191.000.00-------------------------------------------------------------------------------------------------1.00---------------
...................................................................................................................................................................CCGTGCCCCCAACGGGCCC. 1911.001.00----------1.00------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................GTGCCCCCAACGGGCCC. 1711.001.00-------------------------------------------------------------------1.00---------------------------------------------
..............................................................................................................................................................TACATCCGTGCCCCCATAG...... 191.000.00---------------------------------1.00-------------------------------------------------------------------------------
.......................................................................................................................................TCATCCCTAATCTCTAAA.............................. 181.000.00---------------------------------------------------------------------------------------1.00-------------------------
.....................................................................................................................................................................GTGCCCCCAACGG..... 1370.290.29-0.29---------------------------------------------------------------------------------------------------------------
.CACGGCGGCAGCTG........................................................................................................................................................................ 1490.110.11---------------------------------------------------------------------------------------------------------------0.11-
..........................................................................GCAGGAGGGCTGTGCC............................................................................................. 16100.100.10----------------------------------------------------------------------------------------------------------------0.10