ID: hsa-mir-1909
GENE: REXO1
chr19:1816104-1816273-


(4)
AGO2.ip
(1)
AGO3.ip
(12)
B-CELL
(5)
BRAIN
(19)
BREAST
(47)
CELL-LINE
(2)
CERVIX
(1)
FIBROBLAST
(5)
HEART
(4)
HELA
(6)
LIVER
(3)
OTHER
(1)
RRP40.ip
(19)
SKIN
(2)
UTERUS
(1)
XRN.ip

Sense strand
CCTGCGGAACCTCATGGCCGACTACCTCAGACAGATCATCCAGGACAATGGTGAGTGCCGGTGCCTGCCCTGGGGCCGTCCCTGCGCAGGGGCCGGGTGCTCACCGCATCTGCCCCGCAGTGGATGGGCACAGCTCCAGCGAGGACGCCGGCGCCTGCATGCACCTGGTG
..................................................(((((..(((((.(((((...(((.....)))...))))).))).))..)))))..................................................................
..................................................51.........................................................110..........................................................
SizePerfect hitTotal NormPerfect NormSRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
GSM541796(GSM541796)
undifferentiated human embryonic stem cells. (cell line)
SRR189782SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR189786DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR343334SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR343336SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
GSM416733(GSM416733)
HEK293. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR038855(GSM458538)
D10. (cell line)
TAX577579(Rovira)
total RNA. (breast)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR029125(GSM416754)
U2OS. (cell line)
SRR037931(GSM510469)
293GFP. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR038857(GSM458540)
D20. (cell line)
SRR040028(GSM532913)
G026N. (cervix)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577739(Rovira)
total RNA. (breast)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)
SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR191482(GSM715592)
5genomic small RNA (size selected RNA from to. (breast)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037936(GSM510474)
293cand1. (cell line)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR038853(GSM458536)
MELB. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR207117(GSM721079)
Whole cell RNA. (cell line)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038862(GSM458545)
MM472. (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR038859(GSM458542)
MM386. (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
TAX577740(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR037937(GSM510475)
293cand2. (cell line)
SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR343337SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR191413(GSM715523)
28genomic small RNA (size selected RNA from t. (breast)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR040008(GSM532893)
G727N. (cervix)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
....................................................................................CGCAGGGGCCGGGTGCTCACCG................................................................22116.0016.004.00-1.00--------1.00----------1.00-1.00-1.00-------2.00------------------------------1.00----------1.00--1.00-------1.00----1.00---------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCGT...............................................................23114.0016.001.006.00--------1.001.00--2.00--------------------------------1.00----------------1.00------------------------------------------------------------1.00------
..................................................GTGAGTGCCGGTGCCTGCCCTGT.................................................................................................2319.009.00--1.00-------------1.00----------------------1.00---1.00------1.00--------------------------------1.00-------------1.00-1.00---------------------------1.00----
..................................................GTGAGTGCCGGTGCCTGCCCTG..................................................................................................2219.009.00--1.00-1.00-----1.00----------------1.00-----------------------------------1.00-------------1.00-----------------1.00--------1.00----1.00----------------------
..................................................GTGAGTGCCGGTGCCTGCCCT...................................................................................................2119.009.00--2.00----------------3.00------1.00---------------------1.001.00--------1.00-------------------------------------------------------------------------
..................................................GTGAGTGCCGGTGCCTGCCC....................................................................................................2018.008.00-----1.00--1.00--------1.00----------1.00------1.00---------------1.00------------------------------------------------------------1.00---1.00---------------
....................................................................................CGCAGGGGCCGGGTGCTCAC..................................................................2017.007.00-2.00----1.00--------1.00----1.00-----------------------1.00------------------------------1.00--------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACC.................................................................2117.007.001.001.00---1.00--------------1.00--------------------------------------------------------------------------------------------1.00-----1.00----1.00-------
....................................................................................CGCAGGGGCCGGGTGCTCACCGA...............................................................2315.0016.00------1.00---1.00--------------------1.00--------1.00--------------------------------------------------1.00----------------------------------------
...................................................................................GCGCAGGGGCCGGGTGCTCACCGCAT.............................................................2615.005.00-------5.00----------------------------------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACATC...............................................................2315.007.00---5.00--------------------------------------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCGC...............................................................2315.005.001.00-1.00------1.00---------------------1.00--------1.00-------------------------------------------------------------------------------------------
..................................................GTGAGTGCCGGTGCCTGCCATC..................................................................................................225.000.00---5.00--------------------------------------------------------------------------------------------------------------------------------
...................................................................................GCGCAGGGGCCGGGTGCTCACCGT...............................................................244.000.001.00--------------------------------------------------------------------------------1.00----------------------------1.00---------------1.00-----
..................................................GTGAGTGCCGGTGCCTGCCCTGTT................................................................................................2414.009.00--------2.00--------------------------------------------------------------------------------1.00--------1.00---------------------------------
..................................................GTGAGTGCCGGTGCCTGCCCTGA.................................................................................................2314.009.00-----------------2.00------------------------------------------1.00-----------------------------------1.00-----------------------------------
.................................GATCATCCAGGACAATG........................................................................................................................1714.004.00----------1.00------------------1.00--------------------------------------------1.00-------1.00-------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCC................................................................2214.007.00-1.00-------1.00-------------------------------------------------------------1.00--------------------------------------------------1.00---------
...................................................TGAGTGCCGGTGCCTGCCCTGT.................................................................................................223.000.00-1.00------------------------------------------------------1.00-------------1.00-------------------------------------------------------------
.....................................................................................GCAGGGGCCGGGTGCTCACCGT...............................................................223.000.001.00-----1.00-----1.00-----------------------------------------------------------------------------------------------------------------------
.....................................................................................GCAGGGGCCGGGTGCTCACCGA...............................................................223.000.001.00---1.00----------------------------------------------------------------------------------------------------------------------1.00--------
.......AACCTCATGGCCGACTACCTCAGA...........................................................................................................................................2413.003.00-------------------------2.00----------------------------------------------------------------------------------------1.00-----------------
....................................................................................CGCAGGGGCCGGGTGCTCA...................................................................1913.003.00-1.00----------------------------------1.00------------------1.00----------------------------------------------------------------------------
..................................................GTGAGTGCCGGTGCCTGCCCTGTA................................................................................................2413.009.00--------2.00----------------------------------------------------------------------------------------------------------------1.00----------
................................AGATCATCCAGGACAATG........................................................................................................................1812.002.00--------------------------------------------------------------------------------1.00-------------1.00-------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCGCTA.............................................................2512.005.00------------------------------2.00-----------------------------------------------------------------------------------------------------
.............................GACAGATCATCCAGGACAAT.........................................................................................................................2012.002.00-----2.00------------------------------------------------------------------------------------------------------------------------------
...................................................................................GCGCAGGGGCCGGGTGCTCACCCT...............................................................242.000.00------------1.00----------------1.00------------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACAAGA..............................................................2412.007.00----------------------------------------------------1.00--------------------------------------------------------------1.00----------------
...........................CAGACAGATCATCCAGGAC............................................................................................................................1912.002.00-----------------------1.00------------------------------------------1.00-----------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCGTA..............................................................2412.0016.00----1.00----------------------------1.00--------------------------------------------------------------------------------------------------
...................................................TGAGTGCCGGTGCCTGCCCTGG.................................................................................................2212.002.00----------------2.00-------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGCCGGTGCCTGCCCTTT.................................................................................................2312.009.00-------------1.00---------------------------------------------------------------------------------------1.00------------------------------
.............................GACAGATCATCCAGGACA...........................................................................................................................1822.002.00--------------------0.50--------------------0.50----------------------------------------------------------------------------------------0.500.50
..................................................GTGAGTGCCGGTGCCTG.......................................................................................................1712.002.00----------------------------1.00---------1.00---------------------------------------------------------------------------------------------
..................................................................................TGCGCAGGGGCCGGGTGCTCTT..................................................................222.000.00-------------2.00----------------------------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCA................................................................2212.007.002.00-----------------------------------------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCCT...............................................................2312.007.00------------------------------------------------------------------------------------------1.00-----------1.00-----------------------------
...................................................................................GCGCAGGGGCCGGGTGCTCAC..................................................................2112.002.00----2.00-------------------------------------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCGAAA.............................................................2512.0016.00------2.00-----------------------------------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCTTT..............................................................2412.007.002.00-----------------------------------------------------------------------------------------------------------------------------------
........................CCTCAGACAGATCATCCAGGACA...........................................................................................................................2312.002.00----------------------------------------------------------------------------------------1.00----1.00--------------------------------------
...................................................................................GCGCAGGGGCCGGGTGCTCACCGTC..............................................................251.000.00---------1.00--------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGCCGGTGCCTGCCCTTA.................................................................................................2311.009.00--1.00---------------------------------------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCT................................................................2211.007.001.00-----------------------------------------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCCC..................................................................201.000.00------------------------------------------------------------------------------------1.00-----------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCAAT.................................................................2111.003.00---------------1.00--------------------------------------------------------------------------------------------------------------------
..................................................................................TGCGCAGGGGCCGGGTGCTCCGT.................................................................231.000.00-----------1.00------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGCCGGTGCCTGC......................................................................................................1811.001.00--------------------------------------------------------------1.00---------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCGCTC.............................................................2511.005.00---------1.00--------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................TCCAGCGAGGACGCCGGC..................1811.001.00----------------------------------------------------------------------------------------------------------------------1.00-------------
....................................................................................CGCAGGGGCCGGGTGCTCACCGTTT.............................................................2511.0016.00-----------------------------------------------------1.00------------------------------------------------------------------------------
............................AGACAGATCATCCAGGACAA..........................................................................................................................2011.001.00-------------------------------------------------------------------------------------------------------1.00----------------------------
.....................................................................................GCAGGGGCCGGGTGCTCATT.................................................................2031.001.00---------------1.00--------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGCCGGTGCCTGCCCTGC.................................................................................................2311.009.00-----------------------------------------------------------------------------------------------------------1.00------------------------
..................................................GTGAGTGCCGGTGCCTGCAAA...................................................................................................2111.001.00-------------------------------------------------------------------1.00----------------------------------------------------------------
....................ACTACCTCAGACAGATCATCCAGGACA...........................................................................................................................2711.001.00---------------------------------------------------------1.00--------------------------------------------------------------------------
........................................................................................................................TGGATGGGCACAGCTCCAGCGAGGACG.......................2711.001.00-------------------------------------------------------------------------1.00----------------------------------------------------------
...................................................................................................................................AGCTCCAGCGAGGACGCCGG...................2011.001.00------------------1.00-----------------------------------------------------------------------------------------------------------------
.........................CTCAGACAGATCATCCAGGACAATGTGG.....................................................................................................................281.000.00-------------------------------------------------------------------------------------1.00----------------------------------------------
..............TGGCCGACTACCTCATG...........................................................................................................................................171.000.00----------------------1.00-------------------------------------------------------------------------------------------------------------
........................CCTCAGACAGATCATCCAGG..............................................................................................................................2011.001.00--------------------------------------1.00---------------------------------------------------------------------------------------------
.........................CTCAGACAGATCATCCAGGACAAT.........................................................................................................................2411.001.001.00-----------------------------------------------------------------------------------------------------------------------------------
...........................CAGACAGATCATCCAGGACAATGTGG.....................................................................................................................2611.001.00--------------------------------1.00---------------------------------------------------------------------------------------------------
..................................................................................TGCGCAGGGGCCGGGTGCTCCCC.................................................................231.000.001.00-----------------------------------------------------------------------------------------------------------------------------------
.........................CTCAGACAGATCATCCAGGA.............................................................................................................................2011.001.00---------------------------------------------------------------------------------------------------------1.00--------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCGAT..............................................................2411.0016.00----1.00-------------------------------------------------------------------------------------------------------------------------------
..................................................................................TGCGCAGGGGCCGGGTGCTT....................................................................201.000.00-------------------------------------1.00----------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCGAAT.............................................................2511.0016.00-----1.00------------------------------------------------------------------------------------------------------------------------------
...............................................................................CCCTGCGCAGGGGCCGGGTGCTCA...................................................................2411.001.00------------1.00-----------------------------------------------------------------------------------------------------------------------
..............................ACAGATCATCCAGGACAATG........................................................................................................................2011.001.00--1.00---------------------------------------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTT....................................................................181.000.00------------------------------------------------------------------------------------------------------------------------1.00-----------
....................................................................................CGCAGGGGCCGGGTGCTCAT..................................................................2011.003.00-----------------------------------------------------------1.00------------------------------------------------------------------------
...................................................................................GCGCAGGGGCCGGGTGCTCACCTT...............................................................241.000.00------------------------------------1.00-----------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCGTCA.............................................................2511.0016.00----------------------------------------------------------------------------------------------------------1.00-------------------------
...................................................................................GCGCAGGGGCCGGGTGCTCAA..................................................................211.000.00------1.00-----------------------------------------------------------------------------------------------------------------------------
.......................................................................................AGGGGCCGGGTGCTCACCGCTAT............................................................231.000.00---------------------------------------1.00--------------------------------------------------------------------------------------------
..................................................................................TGCGCAGGGGCCGGGTGCTCACC.................................................................2311.001.00----------------------------------------------1.00-------------------------------------------------------------------------------------
...................................................................................GCGCAGGGGCCGGGTGCTCAGA.................................................................221.000.00-----------------------------------1.00------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTTA...................................................................191.000.00---------------------------------------------1.00--------------------------------------------------------------------------------------
...................................................................................GCGCAGGGGCCGGGTGCTCTCC.................................................................221.000.001.00-----------------------------------------------------------------------------------------------------------------------------------
....................................CATCCAGGACAATGGTGAGTGCCGGTGC..........................................................................................................2811.001.00--------------------------------------------------------------------1.00---------------------------------------------------------------
.........................................................................................GGGCCGGGTGCTCACCGGTT.............................................................201.000.00------------------------------------------------------------------------1.00-----------------------------------------------------------
...................................................TGAGTGCCGGTGCCTGCCCTGA.................................................................................................221.000.00---------------------------------------------------------------------1.00--------------------------------------------------------------
...........................CAGACAGATCATCCAGGA.............................................................................................................................1811.001.00------------------------------------------------------------------------------------------------------------1.00-----------------------
....................................................................................CGCAGGGGCCGGGTGCTCAGCAT...............................................................2311.003.00------------1.00-----------------------------------------------------------------------------------------------------------------------
.............................GACAGATCATCCAGGCCA...........................................................................................................................181.000.00-----------------------------------------1.00------------------------------------------------------------------------------------------
...................................................................................GCGCAGGGGCCGGGTGCTCATCGT...............................................................241.000.00-----------1.00------------------------------------------------------------------------------------------------------------------------
..................................................................................TGCGCAGGGGCCGGGTGCTCACCGA...............................................................251.000.001.00-----------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................AGCTCCAGCGAGGACGCCGGCGC................2311.001.00---------------------------------------------------------------------------------------------------------------------1.00--------------
....................................................................................CGCAGGGGCCGGGTGCTCTACC................................................................221.000.00-1.00----------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGCCGGTGCCTGCCAT...................................................................................................211.000.00----------------------------------------------------------------------------------------------------1.00-------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCAT...............................................................2311.007.00-----1.00------------------------------------------------------------------------------------------------------------------------------
......................TACCTCAGACAGATCATCCAGGACA...........................................................................................................................2511.001.00------------------1.00-----------------------------------------------------------------------------------------------------------------
......................................................GTGCCGGTGCCTGCCCTGT.................................................................................................191.000.00--------------------------------------------------------------------------------------1.00---------------------------------------------
............................AGACAGATCATCCAGGACAAT.........................................................................................................................2111.001.00---------------------------------------------------------------------------------------------------------------1.00--------------------
..............................ACAGATCATCCAGGACAACG........................................................................................................................201.000.00-------------------------------------------------------------1.00----------------------------------------------------------------------
.....................................................................................GCAGGGGCCGGGTGCTCA...................................................................1831.001.00------------------------------------------1.00-----------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCAGAAA...............................................................2311.003.00--------------1.00---------------------------------------------------------------------------------------------------------------------
........................................................................................................................................CAGCGAGGACGCCGGCGCCTGCA...........2311.001.00---------------------------1.00--------------------------------------------------------------------------------------------------------
..................................................GTGAGTGCCGGTGCCTGAAC....................................................................................................2011.002.00------------------------------------------------------------------------------1.00-----------------------------------------------------
.......AACCTCATGGCCGACTACCTCAG............................................................................................................................................2311.001.00--1.00---------------------------------------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCCTAT.............................................................2511.007.00---------------------------------1.00--------------------------------------------------------------------------------------------------
.................................................................................CTGCGCAGGGGCCGGGTGCTCAC..................................................................2311.001.00---------------------1.00--------------------------------------------------------------------------------------------------------------
.......................................................................................................................GTGGATGGGCACAGCTCCAGCGAGGACG.......................2811.001.00------------------1.00-----------------------------------------------------------------------------------------------------------------
...........................CAGACAGATCATCCAGGACAATG........................................................................................................................2311.001.00------------------------1.00-----------------------------------------------------------------------------------------------------------
...................................................................................GCGCAGGGGCCGGGTGCTCCC..................................................................211.000.00----1.00-------------------------------------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCGTT..............................................................2411.0016.00----1.00-------------------------------------------------------------------------------------------------------------------------------
...................................................................................GCGCAGGGGCCGGGTGCTCTATA................................................................231.000.00------------------------------------------------------1.00-----------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCGTTTT............................................................2611.0016.00-------------------------------------1.00----------------------------------------------------------------------------------------------
..................................................................................TGCGCAGGGGCCGGGTGCTCCC..................................................................221.000.00----1.00-------------------------------------------------------------------------------------------------------------------------------
..............................ACAGATCATCCAGGACAATGTGG.....................................................................................................................2311.001.00--------------------------------1.00---------------------------------------------------------------------------------------------------
..................................................................................................................................CAGCTCCAGCGAGGACG.......................1720.500.50---------------------------------------------------------------------------------------------------------------------------------0.50--

Antisense strand
CCTGCGGAACCTCATGGCCGACTACCTCAGACAGATCATCCAGGACAATGGTGAGTGCCGGTGCCTGCCCTGGGGCCGTCCCTGCGCAGGGGCCGGGTGCTCACCGCATCTGCCCCGCAGTGGATGGGCACAGCTCCAGCGAGGACGCCGGCGCCTGCATGCACCTGGTG
..................................................(((((..(((((.(((((...(((.....)))...))))).))).))..)))))..................................................................
..................................................51.........................................................110..........................................................
SizePerfect hitTotal NormPerfect NormSRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
GSM541796(GSM541796)
undifferentiated human embryonic stem cells. (cell line)
SRR189782SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR189786DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR343334SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR343336SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
GSM416733(GSM416733)
HEK293. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR038855(GSM458538)
D10. (cell line)
TAX577579(Rovira)
total RNA. (breast)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR029125(GSM416754)
U2OS. (cell line)
SRR037931(GSM510469)
293GFP. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR038857(GSM458540)
D20. (cell line)
SRR040028(GSM532913)
G026N. (cervix)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577739(Rovira)
total RNA. (breast)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)
SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR191482(GSM715592)
5genomic small RNA (size selected RNA from to. (breast)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037936(GSM510474)
293cand1. (cell line)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR038853(GSM458536)
MELB. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR207117(GSM721079)
Whole cell RNA. (cell line)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038862(GSM458545)
MM472. (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR038859(GSM458542)
MM386. (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
TAX577740(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR037937(GSM510475)
293cand2. (cell line)
SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR343337SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR191413(GSM715523)
28genomic small RNA (size selected RNA from t. (breast)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR040008(GSM532893)
G727N. (cervix)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
..................................................................................................GCTCACCGCATCTGCCCCGC.................................................... 2011.001.00-----------------------1.00------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................CGCCTGCATGCACCTGGC. 181.000.00---------------------1.00--------------------------------------------------------------------------------------------------------------
............................................................................................................................................GAGGACGCCGGCGCCTCTT........... 191.000.00--------------------------------------------------------------------------------------------------------------------------------1.00---
......................TACCTCAGACAGATCATTA................................................................................................................................. 191.000.00--1.00---------------------------------------------------------------------------------------------------------------------------------
..................................................................................TGCGCAGGGGCCGG.......................................................................... 1450.200.20---------------------0.20--------------------------------------------------------------------------------------------------------------