ID: hsa-mir-1225
GENE: PKD1
chr16:2140146-2140335-


(3)
AGO2.ip 		(1)
B-CELL 		(8)
BRAIN 		(9)
BREAST 		(16)
CELL-LINE 		(5)
CERVIX 		(9)
HEART 		(6)
HELA 		(1)
KIDNEY 		(4)
LIVER 		(2)
OTHER 		(41)
SKIN 		(1)
TESTES

Sense strand
TGTTCCTGCGCAGGCTGCGCCTCTGGATGGGCCTCAGCAAGGTCAAGGAGGTGGGTACGGCCCAGTGGGGGGGAGAGGGACACGCCCTGGGCTCTGCCCAGGGTGCAGCCGGACTGACTGAGCCCCTGTGCCGCCCCCAGTTCCGCCACAAAGTCCGCTTTGAAGGGATGGAGCCGCTGCCCTCTCGCTC
...................................................((((.....)))).((((((((..((((...((((((((((...))))))))))..(((((.....))).))))))...)).))))))...................................................
..................................................51.......................................................................................140................................................
SizePerfect hitTotal NormPerfect NormSRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189782DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR189786SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR189783SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040008(GSM532893)
G727N. (cervix)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)		SRR189787GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038857(GSM458540)
D20. (cell line)		GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR040036(GSM532921)
G243N. (cervix)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR029129(GSM416758)
SW480. (cell line)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191418(GSM715528)
40genomic small RNA (size selected RNA from t. (breast)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR040018(GSM532903)
G701N. (cervix)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		DRR001484(DRX001038)
"Hela long nuclear cell fraction, control". (hela)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577590(Rovira)
total RNA. (breast)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040037(GSM532922)
G243T. (cervix)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..................................................GTGGGTACGGCCCAGTGG..........................................................................................................................18159.0059.0029.00----3.001.00-2.00-1.001.00----1.003.00---1.003.00-1.00-1.00-1.00-1.00----1.00----1.001.00------1.00--------------------1.001.00------1.00-----1.00--------1.00----1.00---------
.............................................................................................................CGGACTGACTGAGC...................................................................14159.0059.00---25.0016.00---6.00-5.007.00-----------------------------------------------------------------------------------------------
..................................................GTGGGTACGGCCCAGTGGGGGGGAGAGGGACACGCCCTGGGCTCTGCCCAGGGTGCAGCCGGACTGACTGAGCCCCTGTGCCGCCCCCAGT.................................................91158.0058.00--35.00----21.00------------------------------------1.00---------------------------------------1.00----------------------
..................................................GTGGGTACGGCCCAGTGGA.........................................................................................................................19134.0059.0022.00----3.00-----1.00----1.00-1.001.00-2.00----------------------------------------------------1.001.00------------------1.00------------
..................................................GTGGGTACGGCCCAGTGGGG........................................................................................................................20129.0029.001.009.00---1.003.00-----9.00-----1.001.00-----------------------------1.00----------------------------1.001.00--------1.00------------------
..................................................GTGGGTACGGCCCAGTGGGGG.......................................................................................................................21128.0028.00-25.00---1.00------2.00----------------------------------------------------------------------------------------------
..................................................GTGGGTACGGCCCAGTGGGGGG......................................................................................................................22116.0016.001.0010.00---1.002.00--------------------------------------1.00----------------------------------1.00--------------------------
..................................................GTGGGTACGGCCCAGTGGG.........................................................................................................................19115.0015.006.002.00---1.003.00---------------------------------1.00-----------1.00----------------------------1.00-------------------------
..........................................................................................GCTCTGCCCAGGGTGCAGC.................................................................................19114.0014.00---2.006.00---4.00-2.00------------------------------------------------------------------------------------------------
..................................................GTGGGTACGGCCCAGT............................................................................................................................16110.0010.00---1.00------2.003.00--------------1.00--1.00-------------1.00------------------1.00--------------------------------------------
..................................................GTGGGTACGGCCCAGTGGGGGGGAGAGGGAC.............................................................................................................3118.008.00-1.00-------5.00----------------------2.00--------------------------------------------------------------------------
..................................................GTGGGTACGGCCCAGTGGAAA.......................................................................................................................2118.0059.006.00------------------1.00----------------------1.00----------------------------------------------------------------
..................................................GTGGGTACGGCCCAGTGGGA........................................................................................................................2018.0015.005.00---------1.00-------------------1.00-------------------------------------------------------------------1.00--------
..................................................GTGGGTACGGCCCAGTGGGGGGG.....................................................................................................................2317.007.00------2.00--3.00-----------------------------2.00-------------------------------------------------------------------
................................................................................................................ACTGACTGAGCCCCTGTGCCGCCCCCAGT.................................................2917.007.001.00----3.00---1.00---1.00---1.00-----------------------------------------------------------------------------------------
..................................................GTGGGTACGGCCCAGTGGGGGGGAGAGGGA..............................................................................................................3017.007.00---------5.00-----2.00-------------------------------------------------------------------------------------------
..................................................GTGGGTACGGCCCAGTGGGGGGGAGAGGGACACGCCCTGGGCTCTGCCCAGGGTGCAGCCGGACTGACTGAGCCCCTGTGCCGCCCCCAG..................................................9016.006.00--6.00--------------------------------------------------------------------------------------------------------
...........................................................................................................................CCCTGTGCCGCCCCCAGT.................................................1816.006.001.00--1.00-1.00-----1.00------------------------1.001.00---------------------------------------------------------------------
............................................................................................................CCGGACTGACTGAGCCCCTGTGCCG.........................................................2516.006.00------------5.00-1.00--------------------------------------------------------------------------------------------
..................................................GTGGGTACGGCCCAGTGGAA........................................................................................................................2016.0059.003.00----------------1.00---------------------------------------------1.00--------1.00----------------------------------
..................................................GTGGGTACGGCCCAGTGGGGGGGAGAGGG...............................................................................................................2916.006.00--------1.002.00-------------3.00-----------------------------------------------------------------------------------
..................................................GTGGGTACGGCCCAGTGGGGGGGAGAGGGACACGCCCTGGGCTCTGCCCAGGGTGCAGCCGGACTGACTGAGCCCCTGTGCCGCCCCCAGC.................................................9115.006.00--3.00----2.00---------------------------------------------------------------------------------------------------
...............................................................................................................GACTGACTGAGCCCCTGTGCCGCCCCCAGT.................................................3015.005.00-------------3.00----1.00-----------------------------------------------------------------------------1.00----------
.....................................................................................................................CTGAGCCCCTGTGCCGCCCCCAGT.................................................2415.005.00---2.001.00---------1.00----------------------------------------------------------------------------------------1.00---
..................................................GTGGGTACGGCCCAGTGGGGGGGAG...................................................................................................................2515.005.00-1.00-------2.00------------------------------------------------------1.00---1.00--------------------------------------
..................................................GTGGGTACGGCCCAGTGGGGGGGAGAGGGACACG..........................................................................................................3415.005.00---------------4.00---1.00---------------------------------------------------------------------------------------
...................................................................................................................GACTGAGCCCCTGTGCCGCCCCCAGT.................................................2614.004.00---1.00------2.00---------1.00--------------------------------------------------------------------------------------
.............................................................................................................CGGACTGACTGAGCC..................................................................1514.004.00---1.002.00------1.00-----------------------------------------------------------------------------------------------
..................................................GTGGGTACGGCCCAGTGGGGGGGAGAGG................................................................................................................2814.004.001.00-----1.00------------------------2.00---------------------------------------------------------------------------
......................................................................................................................TGAGCCCCTGTGCCGCCCCCAGT.................................................2314.004.00-----2.00--1.00-1.00------------------------------------------------------------------------------------------------
..................................................GTGGGTACGGCCCAGTGGGAA.......................................................................................................................2114.0015.002.00----1.00--------------------------------------------------------------------------------1.00--------------------
................................................................................................................ACTGACTGAGCCCCTGTGCCG.........................................................2113.003.002.00----------------------------------------------------1.00-----------------------------------------------------
..................................................GTGGGTACGGCCCAGTGGGGGGGAGAGGGACACGCCCTGGGCTCTGCCCAGGGTGCAGCCGGACTGACTGAGCCCCTGTGCCGCCCCCAGTT................................................9213.003.00--2.00----1.00---------------------------------------------------------------------------------------------------
..................................................GTGGGTACGGCCCAGTGGGGGGGA....................................................................................................................2413.003.002.00-----1.00----------------------------------------------------------------------------------------------------
..................................................GTGGGTACGGCCCAGTGGGGGGGAGAGGGACACGCCCTGGGCTCTGCCCAGGGTGCAGCCGGACTGACTGAGCCCCTGTGCCGCCCCCAGTCT...............................................9313.0058.00--3.00--------------------------------------------------------------------------------------------------------
..................................................GTGGGTACGGCCCAGTGGAG........................................................................................................................2013.0059.00------------1.00-----1.00---------------------------------------------------------------1.00------------------------
...................................................................................................AGGGTGCAGCCGGACTGACTG......................................................................2113.003.00-------------3.00---------------------------------------------------------------------------------------------
..........................................................................................................................................................CCGCTTTGAAGGGATGGAGCCG..............2212.002.00----------------2.00------------------------------------------------------------------------------------------
..................................................GTGGGTACGGCCCAGTGGGGGGGAGAGGGACAC...........................................................................................................3312.002.00-2.00---------------------------------------------------------------------------------------------------------
.........................................................................................GGCTCTGCCCAGGGTGCAGCCGGACTGACTGAGC...................................................................3412.002.001.00----1.00-----------------------------------------------------------------------------------------------------
.............................................................................................................CGGACTGACTGAGCCCCTGTGCC..........................................................2312.002.00---1.00---------------1.00---------------------------------------------------------------------------------------
..................................................GTGGGTACGGCCCAGTGGGGGGGAGAGGGACACGC.........................................................................................................3512.002.00------1.00------------------------------1.00---------------------------------------------------------------------
.................................................................................................................CTGACTGAGCCCCTGTGCCGC........................................................2112.002.00----------------1.00--------------------------------------------------------------------1.00---------------------
..................................................GTGGGTACGGCCCAGTGGGGGGGAGAGGGACACGCCCTGGGCTCTGCCCAGGGTGCAGCCGGACTGACTGAGCCCCTGTGCCGCCCCCAGG.................................................9112.006.00--1.00----1.00---------------------------------------------------------------------------------------------------
.............................................................................................................CGGACTGACTGAGCCCCTGTGCCGCCCCCA...................................................3012.002.00-----2.00-----------------------------------------------------------------------------------------------------
...........................................................................................................GCCGGACTGACTGAGC...................................................................1612.002.00---1.00----1.00--------------------------------------------------------------------------------------------------
........................................................................................................................AGCCCCTGTGCCGCCCCCAGT.................................................2112.002.00----1.00------1.00-----------------------------------------------------------------------------------------------
......................................................................................................GTGCAGCCGGACTGACTGAGC...................................................................2112.002.00----1.00-------------------------------1.00----------------------------------------------------------------------
.................................................................................................................CTGACTGAGCCCCTGTGCCGCCCCCAGT.................................................2812.002.001.00-------------1.00--------------------------------------------------------------------------------------------
.......................................................................................................................GAGCCCCTGTGCCGCCCCCAGT.................................................2212.002.00------1.00---1.00------------------------------------------------------------------------------------------------
.............................................................................................................CGGACTGACTGAGCCCCTGTGCCG.........................................................2412.002.001.00-----1.00----------------------------------------------------------------------------------------------------
..........................................................................................GCTCTGCCCAGGGTGCAGCCGGACTGAC........................................................................2812.002.00----------1.00------------------------------------------------------------------------------1.00-----------------
.............................................................................................................CGGACTGACTGAGCCCCTGTGCCGC........................................................2512.002.001.00----------1.00-----------------------------------------------------------------------------------------------
....................................................................................................................ACTGAGCCCCTGTGCCGCCCCCAG..................................................2412.002.00---1.00------1.00------------------------------------------------------------------------------------------------
.......................................................................................................................GAGCCCCTGTGCCGCCCCCAGTTA...............................................2412.002.00--------------------2.00--------------------------------------------------------------------------------------
..................................................................................................................TGACTGAGCCCCTGTGCCGCCCCCAGT.................................................2712.002.00--------1.00--------------------------------------1.00-----------------------------------------------------------
..................................................GTGGGTACGGCCCAGTGGGGT.......................................................................................................................2112.0029.00----1.001.00-----------------------------------------------------------------------------------------------------
.............................................................................................................CGGACTGACTGAGCCCCTGTGC...........................................................2212.002.00--------2.00--------------------------------------------------------------------------------------------------
.......................................................................................................................GAGCCCCTGTGCCGCCCCCAGTT................................................2312.002.001.00-------------------------1.00--------------------------------------------------------------------------------
.......................................................................................................................................................AGTCCGCTTTGAAGGGATGGAG.................2212.002.00--------------------------------------2.00--------------------------------------------------------------------
..................................................GTGGGTACGGCCCAGTGGGGGGGAGA..................................................................................................................2612.002.00------2.00----------------------------------------------------------------------------------------------------
.............................................................................................................CGGACTGACTGAGCCCCTGTGCCGCCCCCAGT.................................................3212.002.00------2.00----------------------------------------------------------------------------------------------------
.........................................................................................................CAGCCGGACTGACTGAGC...................................................................1811.001.00------------------------------------------------------1.00----------------------------------------------------
............GGCTGCGCCTCTGGACGCG...............................................................................................................................................................191.000.00-----------------------------------------1.00-----------------------------------------------------------------
............................................................................................................CCGGACTGACTGAGC...................................................................1511.001.00-----------------------------1.00-----------------------------------------------------------------------------
..................................................GTGGGTACGGCCCAGTGGGT........................................................................................................................2011.0015.00-----------------------------------------------------------------1.00-----------------------------------------
.....................................................................................................GGTGCAGCCGGACTGACTGAGCCC.................................................................2411.001.00--------------------1.00--------------------------------------------------------------------------------------
..................................................GTGGGTACGGCCCAGTGGGGGGGAGAGGGACACA..........................................................................................................3411.002.00-1.00---------------------------------------------------------------------------------------------------------
.................................TCAGCAAGGTCAAGGAGTTCC........................................................................................................................................211.000.00----------1.00------------------------------------------------------------------------------------------------
..................................................................................................CAGGGTGCAGCCGGACTGACTGAGC...................................................................2511.001.00----1.00------------------------------------------------------------------------------------------------------
..................................................GTGGGTACGGCCCAGTGGGGGGGGAG..................................................................................................................2611.007.00---------1.00-------------------------------------------------------------------------------------------------
...................................................................................................................GACTGAGCCCCTGTGCCGCCCCCAGA.................................................261.000.00----------1.00------------------------------------------------------------------------------------------------
..................................................GTGGGTACGGCCCAGTGGTG........................................................................................................................2011.0059.00-----1.00-----------------------------------------------------------------------------------------------------
...........................................................................................CTCTGCCCAGGGTGCAGCCGGACTGACT.......................................................................2811.001.00------1.00----------------------------------------------------------------------------------------------------
...................................................................................................................GACTGAGCCCCTGTGCCGCCCCC....................................................2311.001.00------------------------1.00----------------------------------------------------------------------------------
......TGCGCAGGCTGCGCCTCTGGATGGGCC.............................................................................................................................................................2711.001.00--------1.00--------------------------------------------------------------------------------------------------
..................................................GTGGGTACGGCCCAGTGGGGGATT....................................................................................................................2411.0028.00-----------------------------------1.00-----------------------------------------------------------------------
..................................................GTGGGTACGGCCCAGTGGGGGGGAGAGGGACC............................................................................................................3211.008.00-----------------------------------------------------------------------1.00-----------------------------------
.................................................................................................CCAGGGTGCAGCCGGACTGACT.......................................................................2211.001.00-----------1.00-----------------------------------------------------------------------------------------------
............................................................................................................................CCTGTGCCGCCCCCAGC.................................................171.000.00-----1.00-----------------------------------------------------------------------------------------------------
.............................................................................................................CGGACTGACTGAGCCCCT...............................................................1811.001.00---------------------------------------------------------------------------------------------------1.00-------
.....................TCTGGATGGGCCTCAGC........................................................................................................................................................1711.001.00-----1.00-----------------------------------------------------------------------------------------------------
..................................................................................CGCCCTGGGCTCTGCCCAGGGTGCAGCCGGACTGACTGAGCCCCTGTGCCGCCCCCAGT.................................................5911.001.00--1.00--------------------------------------------------------------------------------------------------------
..................................................GTGGGTACGGCCCAGGGG..........................................................................................................................181.000.001.00----------------------------------------------------------------------------------------------------------
.................................................................................................................CTGACTGAGCCCCTGTGCCGCCC......................................................2311.001.00----------------------------1.00------------------------------------------------------------------------------
...............................................................................ACACGCCCTGGGCTCTGCCCAGGGTG.....................................................................................2611.001.00-1.00---------------------------------------------------------------------------------------------------------
.........................................................................................................................GCCCCTGTGCCGCCCCCAGT.................................................2011.001.00------1.00----------------------------------------------------------------------------------------------------
.............GCTGCGCCTCTGGATGCGAG.............................................................................................................................................................201.000.00-----------------------------------------------------------1.00-----------------------------------------------
..................................................................................................................................................................AAGGGATGGAGCCGCTGCCCTCT.....2311.001.00-1.00---------------------------------------------------------------------------------------------------------
............................................................................................................CCGGACTGACTGAGCCCCTGTGCCGCCCCC....................................................3011.001.00--------------1.00--------------------------------------------------------------------------------------------
.......................................................TACGGCCCAGTGGGGGGGAGAGGGA..............................................................................................................2511.001.00------1.00----------------------------------------------------------------------------------------------------
..................................................GTGGGTACGGCCCAGTGGGGGGGAGAGGGACACT..........................................................................................................3411.002.00---------------1.00-------------------------------------------------------------------------------------------
..................................................GTGGGTACGGCCCAGTGGGGGGGAGAGGGATA............................................................................................................3211.007.00-1.00---------------------------------------------------------------------------------------------------------
..........................................................................................................................CCCCTGTGCCGCCCCCAGT.................................................1911.001.00---------------------------1.00-------------------------------------------------------------------------------
..................................................................................................................TGACTGAGCCCCTGTGCCGCCCCCAG..................................................2611.001.00-----------------1.00-----------------------------------------------------------------------------------------
..............................................................................................................................................................................CGCTGCCCTCTCGCTGGC181.000.00-------------------------1.00---------------------------------------------------------------------------------
..................................................GTGGGTACGGCCCAGTAAA.........................................................................................................................1911.0010.00---1.00-------------------------------------------------------------------------------------------------------
..................................................................................................................TGACTGAGCCCCTGTGCCGCCCCCAGA.................................................2711.001.001.00----------------------------------------------------------------------------------------------------------
..................................................GTGGGTACGGCCCAGTGGGGGGGAGAGGGACACGCCCTGGGCTCTGCCCAGGGTGCAGCCGGACTGACTGAGCCCCTGTGCCGCCCCCCGG.................................................911.000.00-------1.00---------------------------------------------------------------------------------------------------
......................................................................GGGAGAGGGACACGCCCTGGGCTCTGC.............................................................................................2711.001.00----------------1.00------------------------------------------------------------------------------------------
..........................................................................................................................CCCCTGTGCCGCCCCCAGTAG...............................................2111.001.00--------------1.00--------------------------------------------------------------------------------------------
..........CAGGCTGCGCCTCTGGATGGG...............................................................................................................................................................2111.001.00------------------------------------------------------------1.00----------------------------------------------
........................................................................................................................AGCCCCTGTGCCGCCCCCACA.................................................211.000.00---------------------------1.00-------------------------------------------------------------------------------
.............................................................................................................CGGACTGACTGAGCCCCTGTGCCGCCCCCAG..................................................3111.001.00------1.00----------------------------------------------------------------------------------------------------
...........................................CAAGGAGGTGGGTACGG..................................................................................................................................1711.001.00-----1.00-----------------------------------------------------------------------------------------------------
................................................................................................................ACTGACTGAGCCCCTGTGCCGCA.......................................................231.000.001.00----------------------------------------------------------------------------------------------------------
..................................................GTGGGTACGGCCCAGTGGGAATT.....................................................................................................................2311.0015.00-------------------------1.00---------------------------------------------------------------------------------
..........................................................................................GCTCTGCCCAGGGTGCAGCCGGACTG..........................................................................2611.001.001.00----------------------------------------------------------------------------------------------------------
........................................................................................GGGCTCTGCCCAGGGTGCAGCCGGACTGACTGAG....................................................................3411.001.001.00----------------------------------------------------------------------------------------------------------
.........................................................................................GGCTCTGCCCAGGGTGCAGC.................................................................................2011.001.00--------1.00--------------------------------------------------------------------------------------------------
.........................................................................................GGCTCTGCCCAGGGTGCAG..................................................................................1911.001.00----------------------------------1.00------------------------------------------------------------------------
.....................................................................................................GGTGCAGCCGGACTGACTGAGC...................................................................2211.001.001.00----------------------------------------------------------------------------------------------------------
..............CTGCGCCTCTGGATGGGC..............................................................................................................................................................1811.001.00-----------1.00-----------------------------------------------------------------------------------------------
......................................................................................CTGGGCTCTGCCCAGGGTGCAGCCGGACTG..........................................................................3011.001.00-----1.00-----------------------------------------------------------------------------------------------------
..................................................GTGGGTACGGCCCAGTGGGGGGGAGAGGGACA............................................................................................................3211.001.00-----1.00-----------------------------------------------------------------------------------------------------
.................................TCAGCAAGGTCAAGGAGGTGG........................................................................................................................................2111.001.00------------------1.00----------------------------------------------------------------------------------------
.......................................................................................................TGCAGCCGGACTGACTGAGC...................................................................2011.001.00----1.00------------------------------------------------------------------------------------------------------
............................................................................................................CCGGACTGACTGAGCCCCTGTGC...........................................................2311.001.00------------------------1.00----------------------------------------------------------------------------------
..................................................GTGGGTACGGCCCAGTGGGGGGGAGAGGGACACGCCCTGGGCTCTGCCCAGGGTGCAGCCGGACTGACTGAGCCCCTGTGCCGCCCCCATTTT...............................................931.000.00------------------------------------------------------------------------------------------1.00----------------
.................................................................................................................CTGACTGAGCCCCTGTGCCGCCCCCAGTTTTT.............................................321.000.00--------------1.00--------------------------------------------------------------------------------------------
............................................................................................................................................................GCTTTGAAGGGATGGAGCCGCTGC..........2411.001.00----------------------------------1.00------------------------------------------------------------------------
....................................................................................................GGGTGCAGCCGGACTGACTGAGC...................................................................2311.001.00-----1.00-----------------------------------------------------------------------------------------------------
..........CAGGCTGCGCCTCTGGATGGGCCTC...........................................................................................................................................................2511.001.00---------------------------------1.00-------------------------------------------------------------------------
..................................................................................................................TGACTGAGCCCCTGTGCCGCCCCCAGC.................................................2711.001.00-----1.00-----------------------------------------------------------------------------------------------------
...................................................TGGGTACGGCCCAGTGGG.........................................................................................................................1811.001.001.00----------------------------------------------------------------------------------------------------------
............................................................................................................CCGGACTGACTGAGCCCCTGTGCCGCCCCCAGT.................................................3311.001.00--------------1.00--------------------------------------------------------------------------------------------
...................CCTCTGGATGGGCCTCAGCAAA.....................................................................................................................................................221.000.00---------------------------------------------------1.00-------------------------------------------------------
............GGCTGCGCCTCTGGACG.................................................................................................................................................................171.000.00------1.00----------------------------------------------------------------------------------------------------
................................................................GTGGGGGGGAGAGGGTGTG...........................................................................................................191.000.00---------------------------------1.00-------------------------------------------------------------------------
.....................TCTGGATGGGCCTCAGCA.......................................................................................................................................................1811.001.001.00----------------------------------------------------------------------------------------------------------
..................................................GTGGGTACGGCCCAGTGTGG........................................................................................................................201.000.00-1.00---------------------------------------------------------------------------------------------------------
..................................................GTGGGTACGGCCCAGTGGGGGGGAGAGGGACACGCCCTGGGCTCTGCCCAGGGTGCAGCCGGACTGACTGAGCCCCTGTGCCGCCCCCCGT.................................................911.000.00--1.00--------------------------------------------------------------------------------------------------------
.........GCAGGCTGCGCCTCTGGATGG................................................................................................................................................................2111.001.00------1.00----------------------------------------------------------------------------------------------------
........................................................................................GGGCTCTGCCCAGGGTGCAGCCGGACTGA.........................................................................2911.001.00-----1.00-----------------------------------------------------------------------------------------------------
................................................................GTGGGGGGGAGAGGGACACG..........................................................................................................2011.001.00-1.00---------------------------------------------------------------------------------------------------------
..........................................................................................GCTCTGCCCAGGGTGCAGCCGGACTGACTGA.....................................................................3111.001.001.00----------------------------------------------------------------------------------------------------------
..............................................................................................................GGACTGACTGAGCCCCTGTGCCGCCCCCAGT.................................................3111.001.00------1.00----------------------------------------------------------------------------------------------------
..................................................GTGGGTACGGCCCAGCGGG.........................................................................................................................191.000.001.00----------------------------------------------------------------------------------------------------------
..................................................GTGGGTACGGCCCAGTGGGGGTAA....................................................................................................................2411.0028.00----------------------------------------------1.00------------------------------------------------------------
................................................................................................................ACTGACTGAGCCCCTGTGCCTCCC......................................................241.000.00-------------------------------------------------------------1.00---------------------------------------------
..................................................GTGGGTACGGCCCAGTGGGTG.......................................................................................................................2111.0015.00-1.00---------------------------------------------------------------------------------------------------------
..............................................................................................................................................................TTTGAAGGGATGGAGCCGCTGCC.........2311.001.00------------------------------------------------------------------------------------------------------1.00----
...............................................................................................................GACTGACTGAGCCCCTGTGCCGCCCCCAG..................................................2911.001.00---1.00-------------------------------------------------------------------------------------------------------
..................................................GTGGGTACGGCCCAGTGGGGGGGAGAGGGAG.............................................................................................................3111.007.00-1.00---------------------------------------------------------------------------------------------------------
............................................................................................................CCGGACTGACTGAGCCCCTGTGCC..........................................................2411.001.001.00----------------------------------------------------------------------------------------------------------
................................................................................................................ACTGACTGAGCCCCTGTGCCGCCCC.....................................................2511.001.00-------------------------1.00---------------------------------------------------------------------------------
......................................................................................CTGGGCTCTGCCCAGGGTGCAGCCGGAC............................................................................2811.001.00----1.00------------------------------------------------------------------------------------------------------
...........................................................................................................................CCCTGTGCCGCCCCCCGT.................................................181.000.001.00----------------------------------------------------------------------------------------------------------
..................................................GTGGGTACGGCCCAGTGGGGGGGAGAGGGGCA............................................................................................................3211.006.00-1.00---------------------------------------------------------------------------------------------------------
...........................................................................AGGGACACGCCCTGGGCTCTGCCCAGGGTGC....................................................................................3111.001.00----1.00------------------------------------------------------------------------------------------------------
..................................................GTGGGTACGGCCCAGTGGGGTT......................................................................................................................2211.0029.00------------------------------------------------------------------1.00----------------------------------------
.GTTCCTGCGCAGGCTGC............................................................................................................................................................................1711.001.00--------------------------------------------------1.00--------------------------------------------------------
................................CTCAGCAAGGTCAAGGAG............................................................................................................................................1811.001.00----------------------------------------------------------1.00------------------------------------------------
.......GCGCAGGCTGCGCCTCTGGATGGGCC.............................................................................................................................................................2611.001.00----------------------------------------------------------------------------------------------------1.00------
...............................................................AGTGGGGGGGAGAGGGGTC............................................................................................................191.000.00-------------------------------------------------------------------1.00---------------------------------------
..........................................................................................GCTCTGCCCAGGGTGCA...................................................................................1730.670.67-----0.67-----------------------------------------------------------------------------------------------------
...........................................................................................................GCCGGACTGACTGAG....................................................................1520.500.50----0.50------------------------------------------------------------------------------------------------------
.........................................................................................................................................................TCCGCTTTGAAGGGATGGA..................1920.500.50---------------------------------------------------------------------------------------------------------0.50-
..................................................................................................................................................................AAGGGATGGAGCCGCTGCC.........1920.500.50------------------------------------------0.50----------------------------------------------------------------
............................................................................GGGACACGCCCTGGGCT.................................................................................................1720.500.50--------------------------------------------------------------------------------------------------------0.50--
.........................................................................................................CAGCCGGACTGACTG......................................................................1520.500.50--------------0.50--------------------------------------------------------------------------------------------
......................................................................GGGAGAGGGACACGC.........................................................................................................1530.330.33----------------------------------------------------------------------------------------------------------0.33
......................................................................................CTGGGCTCTGCCCAGGG.......................................................................................1740.250.25-----0.25-----------------------------------------------------------------------------------------------------
.....................TCTGGATGGGCCTCAG.........................................................................................................................................................1640.250.25-----0.25-----------------------------------------------------------------------------------------------------
..............................................................................................................................................................TTTGAAGGGATGGAGC................1650.200.20----------------------------0.20------------------------------------------------------------------------------

Antisense strand
TGTTCCTGCGCAGGCTGCGCCTCTGGATGGGCCTCAGCAAGGTCAAGGAGGTGGGTACGGCCCAGTGGGGGGGAGAGGGACACGCCCTGGGCTCTGCCCAGGGTGCAGCCGGACTGACTGAGCCCCTGTGCCGCCCCCAGTTCCGCCACAAAGTCCGCTTTGAAGGGATGGAGCCGCTGCCCTCTCGCTC
...................................................((((.....)))).((((((((..((((...((((((((((...))))))))))..(((((.....))).))))))...)).))))))...................................................
..................................................51.......................................................................................140................................................
SizePerfect hitTotal NormPerfect NormSRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189782DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR189786SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR189783SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040008(GSM532893)
G727N. (cervix)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)		SRR189787GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038857(GSM458540)
D20. (cell line)		GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR040036(GSM532921)
G243N. (cervix)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR029129(GSM416758)
SW480. (cell line)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191418(GSM715528)
40genomic small RNA (size selected RNA from t. (breast)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR040018(GSM532903)
G701N. (cervix)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		DRR001484(DRX001038)
"Hela long nuclear cell fraction, control". (hela)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577590(Rovira)
total RNA. (breast)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040037(GSM532922)
G243T. (cervix)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
................................................................................................CCCAGGGTGCAGCCGGACTGACT....................................................................... 2313.003.00-------------3.00---------------------------------------------------------------------------------------------
....................................................................................................................ACTGAGCCCCTGTGCCTCC....................................................... 191.000.00---------------------------1.00-------------------------------------------------------------------------------
........................................................................................................GCAGCCGGACTGACT....................................................................... 1511.001.00-------------------------------------------------------1.00---------------------------------------------------
....................................................................................................................ACTGAGCCCCTGTGCCTCCG...................................................... 201.000.00---------------------------------------------------------------------------------------------1.00-------------
...........................................................................................................................................GTTCCGCCACAAAGTCCG................................. 1811.001.00-------------------------------------------------------------------------1.00---------------------------------
.................................................................................................................................GCCGCCCCCAGTTCCGC............................................ 1711.001.00-----------------------------------------------------------------------------------------------------1.00-----
....................................................................................................................ACTGAGCCCCTGTGCCGCCCCCAGTTCCGC............................................ 3011.001.00------1.00----------------------------------------------------------------------------------------------------
.....................................CAAGGTCAAGGAGGTGGGTACGG.................................................................................................................................. 2311.001.00---------------------------------------------------------------------------------------1.00-------------------
....................................................................................................................ACTGAGCCCCTGTGCCTCT....................................................... 191.000.00--------------------------------------------------------1.00--------------------------------------------------
....................................................................................................................ACTGAGCCCCTGTGCCGCCG...................................................... 201.000.00----------------------------------------------------------------------------1.00------------------------------
...................................................................................................................GACTGAGCCCCTGTGCCGGT....................................................... 201.000.00-1.00---------------------------------------------------------------------------------------------------------
..............................................GGAGGTGGGTACGGCGCA.............................................................................................................................. 181.000.00-----------------------------------------------------------------------------------------------1.00-----------
................................................................................CACGCCCTGGGCTCTGCCAGA......................................................................................... 211.000.00-------------------------------------------------------------------------------------------1.00---------------
.................................................................................ACGCCCTGGGCTCTG.............................................................................................. 1540.250.25-------------------------------------------0.25---------------------------------------------------------------