|
(2) 2OME.ip |
(3) AGO1.ip |
(2) AGO2.ip |
(3) AGO2.mut |
(1) AUB.ip |
(2) BODY |
(2) DCR2.mut |
(1) EMBRYO |
(1) G2 |
(10) HEAD |
(1) LARVAE |
(1) LOQS.mut |
(1) ML_CELL_LINE |
(7) OTHER.mut |
(9) OVARY |
(2) R2D2.mut |
(2) S2 |
(6) S2_R |
(27) TOTAL_RNA.ip |
(6) WHOLE |
| CTTGAATGGCGACAAGACGCTGAAGATGATCTTCCGCCAGCTTTGCGGCCAGAGCTGCAATGGCGCTTGTCCGGAAGTGGAGCGCGTCATGCTCGCCGATGGCTGCCGCATCTCGGACAAGGGCCTTCAGCTCCTCACGCGCCGCTGCCCCGAGTTGACCCACCTTCAGCTACAGACCTGCGTG .............................................................(((.((((((((((.(((((((.((((.........))))))).)))).)).)))))))).)))........................................................... .............................................................62..............................................................126........................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | V127: IP:total RNA G2 | V0642: IP:ago1 MUT:ago2 ago2 ovary, AGO1-IP, reseq | V081:GSM609229 IP:total RNA embryo 2-6hr | V078: IP:total RNA Desiccation, female head | SRR298712:GSM744620 MUT:Bam n: Bam Mutant.. | M064: IP:AGO2 MUT:CG1091 Flag-HA-Ago2 S2R+, knockdown DS1091 | SRR351332:GSM811191 IP:total RNA Nibbler ygenotype: control wild type (w, 5905).. | SRR010955:SRX002240 IP:aub Aub IP in Ago3 heterozygotes | V083:GSM609223 IP:total RNA male, one day | V084:GSM609224 IP:total RNA female, one day | M069: IP:total RNA MUT:CG1091 Flag-HA-Ago2 S2R+, overexpression UAS1091 | SRR351333:GSM811192 IP:total RNA MUT:Nibbler ygenotype: nbr[f02257].. | V094:SRX247213 IP:ago2 FLAG-IP from S2-R+, FLAG-HA-AGO2 | M066: IP:AGO1 MUT:CG1091 Flag-HA-Ago2 S2R+, overexpression UAS1091 | SRR031701:GSM466494 IP:total RNA Total small RNAs from r2d2 heterozygous flies | SRR001349:GSM278705 IP:total RNA heterozygous_dcr-2_untreated | S24:GSM399107 IP:total RNA male body #2 | SRR298537:GSM744630 MUT:Vret ret Mutant.. | S18:GSM322208 IP:total RNA 3rd inster #2 | V089:GSM609237 IP:total RNA MUT:ago2 ago2[414] ovary total RNA | SRR317116:GSM767600 IP:total RNA 5-6 days old flies.. | V006: IP:total RNA r2d2 female: possibly heterozygous | V095:SRX247212 IP:ago1 AGO1-IP from S2-R+, FLAG-HA-AGO2 | M067: IP:total RNA MUT:CG1091 Flag-HA-Ago2 S2R+, knockdown DS1091 | SRR001338:GSM278707 IP:total RNA IR_non-beta-eliminated | V092: IP:total RNA MUT:dcr2 dcr-2[G31R] male total RNA | SRR010953:SRX002238 IP:total RNA Aub heterozygotes, oxidized | SRR029031:GSM430033 MUT:loqs loqs-ORF knockdown | SRR001337:GSM278573 IP:2Ome WT_females_beta-eliminated | V076:GSM609225 IP:total RNA ML-DmBG3-C2 | SRR031702:GSM466495 IP:2Ome flies.. | V097:GSE24545 IP:total RNA CS ovary total RNA | S8:GSM272651 IP:total RNA S2-48,+48, KC-48, +48 mix | S22:GSM322533 IP:total RNA female head #1 | GSM467730: MUT:r2d2 Dmel_r2d2_sRNAseq | SRR001347:GSM278704 IP:total RNA MUT:ago2 ago2_untreated | SRR001664:GSM278703 IP:total RNA MUT:dcr2 homozygous_dcr-2_untreated | V0882:GSM628271 IP:total RNA MUT:r2d2 r2d2[1] ovary total RNA   | SRR031699:GSM466492 IP:total RNA Total small RNAs from dcr-2 homozygous flies |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................TGGCTGCCGCATCTCGGACAAGG.............................................................. | 23 | 1 | 15.00 | 15.00 | 4.00 | - | 2.00 | 1.00 | - | - | 1.00 | - | 1.00 | - | - | 1.00 | - | 1.00 | - | - | 1.00 | - | 1.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................TGGCTGCCGCATCTCGGACAAGGt............................................................. | 24 | t | 9.00 | 15.00 | 3.00 | - | 1.00 | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ....................TGAAGATGATCTTCCGCaaat............................................................................................................................................... | 21 | aaat | 7.00 | 0.00 | - | 7.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................TGGCTGCCGCATCTCGGACAAG............................................................... | 22 | 1 | 5.00 | 5.00 | 2.00 | - | - | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................TTGTCCGGAAGTGGAGCGCGT................................................................................................. | 21 | 1 | 3.00 | 3.00 | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......TGGCGACAAGACGCTGAAGATGA........................................................................................................................................................... | 23 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................TTGTCCGGAAGTGGAGCGCGTC................................................................................................ | 22 | 1 | 2.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .TTGAATGGCGACAAGAaaa.................................................................................................................................................................... | 19 | aaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .......................................................TGCAATGGCGCTTGTCCGGAAGTGGA....................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........ACAAGACGCTGAAGATGATCTTCC..................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................CGCATCTCGGACAAGGGCCTTCAGCTCCT................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................TGGCTGCCGCATCTCGGACAAGt.............................................................. | 23 | t | 1.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................GAAGATGATCTTCCGt................................................................................................................................................... | 16 | t | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................CGCTTGTCCGGAAGTGGAGC..................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................CTGAAGATGATCTTCCGCaa................................................................................................................................................. | 20 | aa | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................CGCCAGCTTTGCGGCgcg.................................................................................................................................... | 18 | gcg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................ATCTCGGACAAGGGCCTTCAGCTCCTCAC.............................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........GACAAGACGCTGAAGATGATCTTCCG.................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................TCTCGGACAAGGGCCTTCAGCTCC.................................................. | 24 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................AGAGCTGCAATGGCGCTTGTCCGG.............................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........GCGACAAGACGCTGAcacg............................................................................................................................................................. | 19 | cacg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ....................TGAAGATGATCTTCCGCCAGC............................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..........................................................................AAGTGGAGCGCGTCATGCTCGC........................................................................................ | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................TGGCTGCCGCATCTCGGACAAGGa............................................................. | 24 | a | 1.00 | 15.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................AAGTGGAGCGCGTCATGagta......................................................................................... | 21 | agta | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................CGCCAGCTTTGCGG........................................................................................................................................ | 14 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................TTGACCCACCTTC................. | 13 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - | - |
| ...................................GCCAGCTTTGCGG........................................................................................................................................ | 13 | 7 | 0.29 | 0.29 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.14 | - | - | - |
| ..................................................................................................................................................GCCCCGAGTTGA.......................... | 12 | 10 | 0.10 | 0.10 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.10 | - | - |
| ...........ACAAGACGCTGA................................................................................................................................................................. | 12 | 11 | 0.09 | 0.09 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.09 | - | - | - |
| .....................................................................................................................................CTCACGCGCCGC....................................... | 12 | 12 | 0.08 | 0.08 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.08 | - |
| ...................................GCCAGCTTTGCG......................................................................................................................................... | 12 | 18 | 0.06 | 0.06 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.06 |
| CTTGAATGGCGACAAGACGCTGAAGATGATCTTCCGCCAGCTTTGCGGCCAGAGCTGCAATGGCGCTTGTCCGGAAGTGGAGCGCGTCATGCTCGCCGATGGCTGCCGCATCTCGGACAAGGGCCTTCAGCTCCTCACGCGCCGCTGCCCCGAGTTGACCCACCTTCAGCTACAGACCTGCGTG .............................................................(((.((((((((((.(((((((.((((.........))))))).)))).)).)))))))).)))........................................................... .............................................................62..............................................................126........................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | V127: IP:total RNA G2 | V0642: IP:ago1 MUT:ago2 ago2 ovary, AGO1-IP, reseq | V081:GSM609229 IP:total RNA embryo 2-6hr | V078: IP:total RNA Desiccation, female head | SRR298712:GSM744620 MUT:Bam n: Bam Mutant.. | M064: IP:AGO2 MUT:CG1091 Flag-HA-Ago2 S2R+, knockdown DS1091 | SRR351332:GSM811191 IP:total RNA Nibbler ygenotype: control wild type (w, 5905).. | SRR010955:SRX002240 IP:aub Aub IP in Ago3 heterozygotes | V083:GSM609223 IP:total RNA male, one day | V084:GSM609224 IP:total RNA female, one day | M069: IP:total RNA MUT:CG1091 Flag-HA-Ago2 S2R+, overexpression UAS1091 | SRR351333:GSM811192 IP:total RNA MUT:Nibbler ygenotype: nbr[f02257].. | V094:SRX247213 IP:ago2 FLAG-IP from S2-R+, FLAG-HA-AGO2 | M066: IP:AGO1 MUT:CG1091 Flag-HA-Ago2 S2R+, overexpression UAS1091 | SRR031701:GSM466494 IP:total RNA Total small RNAs from r2d2 heterozygous flies | SRR001349:GSM278705 IP:total RNA heterozygous_dcr-2_untreated | S24:GSM399107 IP:total RNA male body #2 | SRR298537:GSM744630 MUT:Vret ret Mutant.. | S18:GSM322208 IP:total RNA 3rd inster #2 | V089:GSM609237 IP:total RNA MUT:ago2 ago2[414] ovary total RNA | SRR317116:GSM767600 IP:total RNA 5-6 days old flies.. | V006: IP:total RNA r2d2 female: possibly heterozygous | V095:SRX247212 IP:ago1 AGO1-IP from S2-R+, FLAG-HA-AGO2 | M067: IP:total RNA MUT:CG1091 Flag-HA-Ago2 S2R+, knockdown DS1091 | SRR001338:GSM278707 IP:total RNA IR_non-beta-eliminated | V092: IP:total RNA MUT:dcr2 dcr-2[G31R] male total RNA | SRR010953:SRX002238 IP:total RNA Aub heterozygotes, oxidized | SRR029031:GSM430033 MUT:loqs loqs-ORF knockdown | SRR001337:GSM278573 IP:2Ome WT_females_beta-eliminated | V076:GSM609225 IP:total RNA ML-DmBG3-C2 | SRR031702:GSM466495 IP:2Ome flies.. | V097:GSE24545 IP:total RNA CS ovary total RNA | S8:GSM272651 IP:total RNA S2-48,+48, KC-48, +48 mix | S22:GSM322533 IP:total RNA female head #1 | GSM467730: MUT:r2d2 Dmel_r2d2_sRNAseq | SRR001347:GSM278704 IP:total RNA MUT:ago2 ago2_untreated | SRR001664:GSM278703 IP:total RNA MUT:dcr2 homozygous_dcr-2_untreated | V0882:GSM628271 IP:total RNA MUT:r2d2 r2d2[1] ovary total RNA   | SRR031699:GSM466492 IP:total RNA Total small RNAs from dcr-2 homozygous flies |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................ggcCTGAAGATGATCTTCCGC................................................................................................................................................... | 21 | ggc | 2.00 | 0.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................cctcCCTTCAGCTCCTCACGC............................................ | 21 | cctc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................aaaGCCTTCAGCTCCTCA............................................... | 18 | aaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................GAAGATGATCTTCCGCCAGCT.............................................................................................................................................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................tcaaGCCTTCAGCTCCTCA............................................... | 19 | tcaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..............................................catCAGAGCTGCAATGGC........................................................................................................................ | 18 | cat | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................TCCTCACGCGCCGCTGCCCCGA............................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .........................................................................................................................................................tacGACCCACCTTCAGCT............. | 18 | tac | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .....................GAAGATGATCTTCCG.................................................................................................................................................... | 15 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................TGCGGCCAGAGCT................................................................................................................................ | 13 | 5 | 0.20 | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.20 | - | - |
| ......................................................................................TCATGCTCGCCG...................................................................................... | 12 | 7 | 0.14 | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................ATGGCTGCCGCAT......................................................................... | 13 | 7 | 0.14 | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.14 | - | - | - |
| ..............................................................................................................TCTCGGACAAGG.............................................................. | 12 | 7 | 0.14 | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........CGACAAGACGCT................................................................................................................................................................... | 12 | 8 | 0.12 | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................AGCTCCTCACGC............................................ | 12 | 10 | 0.10 | 0.10 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.10 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |