ID: dme-mir-4972
chr2L:3636917-3637123 -
Display Libraries
(6)
AGO1.ip 		(3)
AGO2.ip 		(3)
AGO2.mut 		(1)
ARMI.mut 		(1)
AUB.ip 		(6)
BODY 		(1)
CME L1 		(5)
DCR2.mut 		(11)
HEAD 		(1)
KC 		(1)
LARVAE 		(1)
LOQS.mut 		(2)
ML_CELL_LINE 		(1)
OSC 		(2)
OSS 		(1)
OTHER.ip 		(5)
OTHER.mut 		(18)
OVARY 		(1)
PIWI.ip 		(1)
PUPAE 		(1)
R2D2.mut 		(1)
S1 		(6)
S2 		(4)
S2_R 		(2)
S3 		(1)
TESTES 		(49)
TOTAL_RNA.ip 		(5)
WHOLE 		(1)
ZUC.mut 		(1)
mbn2
Showing top 43 reads
GGCGACGCTTGTGTGTGCAACAGGACATTTTTTGACACTTGCATGGCATAAATCAAAAGCGCCGTAGGCCTCCACCTCGGCTTTACAGATATATATATATATATCGTGTATATATCTGTGCGATCGGGATTGAGACTGAGGTTGGTCCGAGTACTTTTGTGGCCATTTACACCACGCAACTGTCGCTTGTTGGCTTTCAACGGGGCC
.....................................................................(((...(((((...(((((((((((((((.......)))))))))))))))...)))))...))).........................................................................
.....................................................................70...............................................................135......................................................................
 Size Perfect hit Total Norm Perfect Norm SRR029032:GSM430034 MUT:r2d2 r2d2 knockdown V0652: IP:ago1 MUT:dcr2 dcr2 ovary, AGO1-IP, reseq V074: IP:total RNA S3 V128: IP:total RNA S3 V098:GSE24544 IP:total RNA MUT:dcr2 dcr-2[L811fsX] ovary total RNA SRR317113:GSM767597 IP:total RNA 5-6 days old flies.. S32:GSM609242 IP:total RNA s2+48 #2 SRR317115:GSM767599 IP:total RNA old flies.. S30:GSM361908 IP:total RNA s2-48 Biological Replicate #2 V097:GSE24545 IP:total RNA CS ovary total RNA V093: IP:total RNA MUT:loqs loqs-KO, 40A; loqs-PB rescue/TM3  male total RNA M064: IP:AGO2 MUT:CG1091 Flag-HA-Ago2 S2R+, knockdown DS1091 SRR317110:GSM767594 IP:total RNA ays old flies.. SRR029608: IP:total RNA total small RNAs from hen1 heterozygous flies SRR317114:GSM767598 IP:total RNA om 5-6 days old flies.. V146: IP:total RNA S1 cell M069: IP:total RNA MUT:CG1091 Flag-HA-Ago2 S2R+, overexpression UAS1091 SRR010957:SRX002242 IP:aub Aub IP in Ago3 trans-heterozygotes V140: IP:total RNA Dessication_female_body SRR031697:GSM466490 IP:total RNA Total small RNAs from dcr-2 heterozygous flies V073: IP:total RNA mbn2 SRR031696:GSM466489 IP:ago1 Ago1-associated small RNAs from Oregon R V142: IP:total RNA Oxidation_female_body SRR060644:GSM548583 IP:total RNA A2_ovaries_total V090:GSM609234 IP:total RNA CS  male total RNA   S19:GSM322219 IP:total RNA 2-4day pupae #1 S24:GSM399107 IP:total RNA male body #2 V126: IP:total RNA CME L1 V139: IP:total RNA Cold_female_body S18:GSM322208 IP:total RNA 3rd inster #2 V134: IP:total RNA ML-DmD8 V0892:GSM628272 IP:total RNA MUT:ago2 ago2[414] ovary total RNA SRR065805:GSM593302 IP:piwi MUT:zuc Piwi-IP_zuc_het(H-Y)_ovaries SRR351332:GSM811191 IP:total RNA Nibbler ygenotype: control wild type (w, 5905).. V083:GSM609223 IP:total RNA male, one day SRR031701:GSM466494 IP:total RNA Total small RNAs from r2d2 heterozygous flies V092: IP:total RNA MUT:dcr2 dcr-2[G31R] male total RNA   SRR029028:GSM430030 IP:total RNA untreated (mock) V144: IP:total RNA OSC GSM379057: MUT:Krimp Krimp Mutant V0632: IP:ago1 wt ovary AGO1-IP, reseq SRR029633: IP:total RNA total small RNAs from hen1 homozygous flies SRR341117:GSM786606 IP:Nibbler MUT:Oxidized Schneider 2 (S2) cellsoxidation.. SRR031692:GSM466487 IP:total RNA Total small RNAs from Oregon R S16:GSM272653 IP:total RNA KC -48 #1 SRR317117:GSM767601 IP:total RNA ld flies.. M068: IP:AGO2 MUT:CG1091 Flag-HA-Ago2 S2R+, overexpression UAS1091 SRR060652:GSM548591 IP:total RNA hs-Penelope_testes_total V076:GSM609225 IP:total RNA ML-DmBG3-C2 SRR001349:GSM278705 IP:total RNA heterozygous_dcr-2_untreated V145: IP:total RNA S2-DRSC GSM379052: IP:total RNA Aub Heterozygote V065:GSM609236 IP:ago1 MUT:dcr2 dcr-2[L811fsX], ovary, AGO1IP V091: IP:total RNA fGS/OSS total   GSM379051: MUT:armi Armi Mutant SRR032152:GSM466489 IP:ago1 Ago1-associated small RNAs from Oregon R V0642: IP:ago1 MUT:ago2 ago2 ovary, AGO1-IP, reseq V086: IP:total RNA female body, aged OSS6:GSM385748 IP:total RNA OSS_s6 V138: IP:total RNA Male cold body V094:SRX247213 IP:ago2 FLAG-IP from S2-R+, FLAG-HA-AGO2 SRR001347:GSM278704 IP:total RNA MUT:ago2 ago2_untreated SRR001664:GSM278703 IP:total RNA MUT:dcr2 homozygous_dcr-2_untreated SRR001339:GSM278706 IP:total RNA WT_females_non-beta-eliminated
.............................................................................................................ATATATCTGTGCGATCGGGATT............................................................................ 22 1 25.00 25.00 - 3.00 - 3.00 2.00 1.00 - 1.00 - - - 1.00 2.00 - 1.00 - 1.00 - - - 1.00 1.00 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - 1.00 - - - 1.00 - - - 1.00 - - - - 1.00 - 1.00 - - - - - -
..............................................................................................................TATATCTGTGCGATCGGGATTG........................................................................... 22 1 16.00 16.00 - 1.00 3.00 - 2.00 - - - - 4.00 - - - - - - - - - 2.00 - - - - - - - 1.00 - - - - - - - - - - - 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - -
.............................................................................................................ATATATCTGTGCGATCGGGAT............................................................................. 21 1 14.00 14.00 - 2.00 - - 2.00 2.00 - - - - - - - 1.00 - - - - - - - - 1.00 - - - - - - - 1.00 - - 1.00 - 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - -
..............................................................................................................TATATCTGTGCGATCGGGATT............................................................................ 21 1 6.00 6.00 - - 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - 1.00 - - - -
..........................................................................CCTCGGCTTTACAGATATAT................................................................................................................. 20 1 3.00 3.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - -
.........................................................................ACCTCGGCTTTACAGATATATA................................................................................................................ 22 1 3.00 3.00 - - - - - 1.00 - 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................TATATCTGTGCGATCGGGAT............................................................................. 20 1 2.00 2.00 - - 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................ATATATCTGTGCGATCGGGA.............................................................................. 20 1 2.00 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................CCTCGGCTTTACAGATATATAT............................................................................................................... 22 1 2.00 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
...............................................................................................................ATATCTGTGCGATCGGGATTGAGA........................................................................ 24 1 2.00 2.00 - - - - - - - - - - - - - - - - - - 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................GATTGAGACTGAGGTTGGTCCGAGTAC..................................................... 27 1 2.00 2.00 - - - - - - - - - - 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................TATATCTGTGCGATCGGGAgcg........................................................................... 22 gcg 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................TGAGGTTGGTCCGAGTACTTTTGTGGC............................................ 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
............................................................................................................TATATATCTGTGCGATCGGGATTaaa......................................................................... 26 aaa 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................ATATATATCGTGTATATggcc.......................................................................................... 21 ggcc 1.00 0.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................TATATATATATATCGaagc................................................................................................. 19 aagc 1.00 0.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................ACCTCGGCTTTACAGATATAT................................................................................................................. 21 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................ATATATCTGTGCGATCGGGATTaaa......................................................................... 25 aaa 1.00 25.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................CCTCGGCTTTACAGATATATA................................................................................................................ 21 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................TATATATCTGTGCGATCGGGA.............................................................................. 21 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................AGTACTTTTGTGGCCcgc........................................ 18 cgc 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................ACTGTCGCTTGTTGGtgt........... 18 tgt 1.00 0.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................ATATATCTGTGCGATCGGGATTG........................................................................... 23 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................CGGGATTGAGACTGAGGTTG............................................................... 20 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................CCTCGGCTTTACAGA...................................................................................................................... 15 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
...........................................................................................TATATATATATATCGTGgcat............................................................................................... 21 gcat 1.00 0.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................ATCTGTGCGATCGGGATTGAGA........................................................................ 22 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................CGGCTTTACAGAT..................................................................................................................... 13 3 0.33 0.33 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.33 - -
....................................................................................................................................................................................................TCAACGGGGCC 11 17 0.12 0.12 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.06 0.06
GGCGACGCTTGTGTGTGCAACAGGACATTTTTTGACACTTGCATGGCATAAATCAAAAGCGCCGTAGGCCTCCACCTCGGCTTTACAGATATATATATATATATCGTGTATATATCTGTGCGATCGGGATTGAGACTGAGGTTGGTCCGAGTACTTTTGTGGCCATTTACACCACGCAACTGTCGCTTGTTGGCTTTCAACGGGGCC
.....................................................................(((...(((((...(((((((((((((((.......)))))))))))))))...)))))...))).........................................................................
.....................................................................70...............................................................135......................................................................
 Size Perfect hit Total Norm Perfect Norm SRR029032:GSM430034 MUT:r2d2 r2d2 knockdownV0652: IP:ago1 MUT:dcr2 dcr2 ovary, AGO1-IP, reseqV074: IP:total RNA S3V128: IP:total RNA S3V098:GSE24544 IP:total RNA MUT:dcr2 dcr-2[L811fsX] ovary total RNASRR317113:GSM767597 IP:total RNA 5-6 days old flies..S32:GSM609242 IP:total RNA s2+48 #2SRR317115:GSM767599 IP:total RNA old flies..S30:GSM361908 IP:total RNA s2-48 Biological Replicate #2V097:GSE24545 IP:total RNA CS ovary total RNAV093: IP:total RNA MUT:loqs loqs-KO, 40A; loqs-PB rescue/TM3  male total RNAM064: IP:AGO2 MUT:CG1091 Flag-HA-Ago2 S2R+, knockdown DS1091SRR317110:GSM767594 IP:total RNA ays old flies..SRR029608: IP:total RNA total small RNAs from hen1 heterozygous fliesSRR317114:GSM767598 IP:total RNA om 5-6 days old flies..V146: IP:total RNA S1 cellM069: IP:total RNA MUT:CG1091 Flag-HA-Ago2 S2R+, overexpression UAS1091SRR010957:SRX002242 IP:aub Aub IP in Ago3 trans-heterozygotesV140: IP:total RNA Dessication_female_bodySRR031697:GSM466490 IP:total RNA Total small RNAs from dcr-2 heterozygous fliesV073: IP:total RNA mbn2SRR031696:GSM466489 IP:ago1 Ago1-associated small RNAs from Oregon RV142: IP:total RNA Oxidation_female_bodySRR060644:GSM548583 IP:total RNA A2_ovaries_totalV090:GSM609234 IP:total RNA CS  male total RNA  S19:GSM322219 IP:total RNA 2-4day pupae #1S24:GSM399107 IP:total RNA male body #2V126: IP:total RNA CME L1V139: IP:total RNA Cold_female_bodyS18:GSM322208 IP:total RNA 3rd inster #2V134: IP:total RNA ML-DmD8V0892:GSM628272 IP:total RNA MUT:ago2 ago2[414] ovary total RNASRR065805:GSM593302 IP:piwi MUT:zuc Piwi-IP_zuc_het(H-Y)_ovariesSRR351332:GSM811191 IP:total RNA Nibbler ygenotype: control wild type (w, 5905)..V083:GSM609223 IP:total RNA male, one daySRR031701:GSM466494 IP:total RNA Total small RNAs from r2d2 heterozygous fliesV092: IP:total RNA MUT:dcr2 dcr-2[G31R] male total RNA  SRR029028:GSM430030 IP:total RNA untreated (mock)V144: IP:total RNA OSCGSM379057: MUT:Krimp Krimp MutantV0632: IP:ago1 wt ovary AGO1-IP, reseqSRR029633: IP:total RNA total small RNAs from hen1 homozygous fliesSRR341117:GSM786606 IP:Nibbler MUT:Oxidized Schneider 2 (S2) cellsoxidation..SRR031692:GSM466487 IP:total RNA Total small RNAs from Oregon RS16:GSM272653 IP:total RNA KC -48 #1SRR317117:GSM767601 IP:total RNA ld flies..M068: IP:AGO2 MUT:CG1091 Flag-HA-Ago2 S2R+, overexpression UAS1091SRR060652:GSM548591 IP:total RNA hs-Penelope_testes_totalV076:GSM609225 IP:total RNA ML-DmBG3-C2SRR001349:GSM278705 IP:total RNA heterozygous_dcr-2_untreatedV145: IP:total RNA S2-DRSCGSM379052: IP:total RNA Aub HeterozygoteV065:GSM609236 IP:ago1 MUT:dcr2 dcr-2[L811fsX], ovary, AGO1IPV091: IP:total RNA fGS/OSS total  GSM379051: MUT:armi Armi MutantSRR032152:GSM466489 IP:ago1 Ago1-associated small RNAs from Oregon RV0642: IP:ago1 MUT:ago2 ago2 ovary, AGO1-IP, reseqV086: IP:total RNA female body, agedOSS6:GSM385748 IP:total RNA OSS_s6V138: IP:total RNA Male cold bodyV094:SRX247213 IP:ago2 FLAG-IP from S2-R+, FLAG-HA-AGO2SRR001347:GSM278704 IP:total RNA MUT:ago2 ago2_untreatedSRR001664:GSM278703 IP:total RNA MUT:dcr2 homozygous_dcr-2_untreatedSRR001339:GSM278706 IP:total RNA WT_females_non-beta-eliminated
...................................................................................................................tttTGCGATCGGGATTGAGAC....................................................................... 21 ttt 8.00 0.00 8.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................tgATATATATATATATCG..................................................................................................... 18 tg 4.00 0.00 - - - - - - 3.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................cgATATATATATATATCG..................................................................................................... 18 cg 3.00 0.00 - - - - - - - - 3.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................caATATATATATATATCGT.................................................................................................... 19 ca 2.00 0.00 - - - - - - - - - - - - - - - - - 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.....................................gacGCATGGCATAAATCAAAA..................................................................................................................................................... 21 gac 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
...............................TTGACACTTGCATGGCATAA............................................................................................................................................................ 20 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
......................................................................................tGATATATATATATATATCG..................................................................................................... 20 t 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - -
......................................................................................cGATATATATATATATATCG..................................................................................................... 20 c 1.00 0.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.......................tcccTTTTTTGACACTTGCAT................................................................................................................................................................... 21 tccc 1.00 0.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
....tgcCTTGTGTGTGCAACAG........................................................................................................................................................................................ 19 tgc 1.00 0.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................gcaCATTTACACCACGCA............................. 18 gca 1.00 0.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................agcACAGATATATATATA............................................................................................................ 18 agc 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
...............................aTGACACTTGCATGGC................................................................................................................................................................ 16 a 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
.........................................................................................TATATATATATATATCGTGT.................................................................................................. 20 3 0.33 0.33 - - - - - 0.33 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................TCAACGGGGCC 11 17 0.06 0.06 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.06 -