ID: CG1136_in2
chr3L:4057340-4057549 +
Display Libraries
(1)
2OME_MUTANT.ip 		(3)
AGO1.ip 		(2)
AGO2.mut 		(1)
ARMI.mut 		(1)
AUB.ip 		(3)
BODY 		(1)
DCR2.mut 		(1)
EMBRYO 		(9)
HEAD 		(1)
OTHER.ip 		(2)
OTHER.mut 		(16)
OVARY 		(1)
PUPAE 		(1)
R2D2.mut 		(1)
S2 		(1)
S3 		(27)
TOTAL_RNA.ip 		(3)
WHOLE
Showing top 32 reads
AGCGATACTTCCGCTTCCAAACGGACAGCGGACAGTTCCGCAAGGAGAAACGGCTGCAGGATGGCACAGTCATCGGTGAGTGATCAACGATGTCTATAGTGGGAAAGTACATTGAACTAATTGATTACTGACAGGAACTGAGGCCTGGATCGATGCGGCGGGCTATCTACGACAGAAGGACTACATTGCCGATAAGCAGGGATACAGGA
..........................................................................................((((..((((.((..(((.......)))..)).))))..))))............................................................................
.................................................................................82..................................................134.........................................................................
 Size Perfect hit Total Norm Perfect Norm SRR298537:GSM744630 MUT:Vret ret Mutant.. V082:GSM609238 IP:total RNA embryo 14-24hr V0632: IP:ago1 wt ovary AGO1-IP, reseq SRR317110:GSM767594 IP:total RNA ays old flies.. S24:GSM399107 IP:total RNA male body #2 GSM467729: IP:total RNA Dmel_wt_sRNAseq V087: IP:ChIP-Seq Grh (mouse ab), Dm stage 16 SRR317113:GSM767597 IP:total RNA 5-6 days old flies.. SRR001348:GSM278693 IP:2'Ome in mutant MUT:ago2 ago2_oxidized SRR060644:GSM548583 IP:total RNA A2_ovaries_total V0652: IP:ago1 MUT:dcr2 dcr2 ovary, AGO1-IP, reseq S19:GSM322219 IP:total RNA 2-4day pupae #1 SRR317111:GSM767595 IP:total RNA : from 5-6 days old flies.. SRR029608: IP:total RNA total small RNAs from hen1 heterozygous flies GSM379065: IP:total RNA Zuc Heterozygote GSM379053: MUT:armi Aub Mutant SRR317112:GSM767596 IP:total RNA old flies.. V083:GSM609223 IP:total RNA male, one day SRR031701:GSM466494 IP:total RNA Total small RNAs from r2d2 heterozygous flies SRR029028:GSM430030 IP:total RNA untreated (mock) V084:GSM609224 IP:total RNA female, one day V074: IP:total RNA S3 V007:GSM609247 IP:total RNA heat female head SRR029633: IP:total RNA total small RNAs from hen1 homozygous flies SRR031692:GSM466487 IP:total RNA Total small RNAs from Oregon R SRR317117:GSM767601 IP:total RNA ld flies.. SRR010957:SRX002242 IP:aub Aub IP in Ago3 trans-heterozygotes GSM379063: IP:total RNA Vasa Heterozygote V0882:GSM628271 IP:total RNA MUT:r2d2 r2d2[1] ovary total RNA   SRR031697:GSM466490 IP:total RNA Total small RNAs from dcr-2 heterozygous flies M065: MUT:CG1091 ovary - sample C, homozygous mutant V077: IP:total RNA cold, female head V138: IP:total RNA Male cold body V063:GSM609230 IP:ago1 CS,ovary,AGO1IP SRR351332:GSM811191 IP:total RNA Nibbler ygenotype: control wild type (w, 5905).. SRR001347:GSM278704 IP:total RNA MUT:ago2 ago2_untreated
................................................................................................................TGAACTAATTGATTACTGACAG........................................................................... 22 1 8.00 8.00 1.00 - - - 1.00 1.00 - 1.00 - - - - 1.00 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - -
................................................................................................................TGAACTAATTGATTACTGACAGt.......................................................................... 23 t 6.00 8.00 5.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - -
................................................................................................................TGAACTAATTGATTACTGACAGa.......................................................................... 23 a 4.00 8.00 - - 2.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
................................................................................................................TGAACTAATTGATTACTGACA............................................................................ 21 1 4.00 4.00 1.00 - - - 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - -
.................................................................................................................GAACTAATTGATTACTGACAGt.......................................................................... 22 t 3.00 0.00 2.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
...............................................................................................................TTGAACTAATTGATTACTGACAG........................................................................... 23 1 2.00 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - 1.00 - - - - - - -
...........................................................................GTGAGTGATCAACGATGTCTAT................................................................................................................ 22 1 2.00 2.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
......................................................................................ACGATGTCTATAGTGGGA......................................................................................................... 18 1 2.00 2.00 - 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................GGAACTGAGGCCTGGtcac......................................................... 19 tcac 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - -
...................................................................................................................................................GATCGATGCGGCGGGacca........................................... 19 acca 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - -
................................................................................................................................................CTGGATCGATGCGGCGGacaa............................................ 21 acaa 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
..........................................................................................................................GATTACTGACAGGAAgag..................................................................... 18 gag 1.00 0.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
..................................GTTCCGCAAGGAGAAACGGCTGCAGGAT................................................................................................................................................... 28 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
.................................................................................................AGTGGGAAAGTACATTGAACTAAT........................................................................................ 24 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................GTGAGTGATCAACGATGTCTA................................................................................................................. 21 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................GGAACTGAGGCCTGGgct.......................................................... 18 gct 1.00 0.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
.................................................................................................................................GACAGGAACTGAGGCaggg............................................................. 19 aggg 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
.............................................................................................................................................................................................CGATAAGCAGGGATACAGG. 19 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
.....................................................................TCATCGGTGAGTGATtgg.......................................................................................................................... 18 tgg 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - -
...............................................................................................................TTGAACTAATTGATTACTGACAGc.......................................................................... 24 c 1.00 2.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
................................................................................................................TGAACTAATTGATTACTGACAca.......................................................................... 23 ca 1.00 4.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................ACAGTCATCGGTGAGTataa............................................................................................................................ 20 ataa 1.00 0.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.................CAAACGGACAGCGGAggcg............................................................................................................................................................................. 19 ggcg 1.00 0.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
.......................................................................................................................................AACTGAGGCCTGGATCGATGC..................................................... 21 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................ATCTACGACAGA................................. 12 9 0.11 0.11 - - - - - - - - 0.11 - - - - - - - - - - - - - - - - - - - - - - - - - - -
AGCGATACTTCCGCTTCCAAACGGACAGCGGACAGTTCCGCAAGGAGAAACGGCTGCAGGATGGCACAGTCATCGGTGAGTGATCAACGATGTCTATAGTGGGAAAGTACATTGAACTAATTGATTACTGACAGGAACTGAGGCCTGGATCGATGCGGCGGGCTATCTACGACAGAAGGACTACATTGCCGATAAGCAGGGATACAGGA
..........................................................................................((((..((((.((..(((.......)))..)).))))..))))............................................................................
.................................................................................82..................................................134.........................................................................
 Size Perfect hit Total Norm Perfect Norm SRR298537:GSM744630 MUT:Vret ret Mutant..V082:GSM609238 IP:total RNA embryo 14-24hrV0632: IP:ago1 wt ovary AGO1-IP, reseqSRR317110:GSM767594 IP:total RNA ays old flies..S24:GSM399107 IP:total RNA male body #2GSM467729: IP:total RNA Dmel_wt_sRNAseqV087: IP:ChIP-Seq Grh (mouse ab), Dm stage 16SRR317113:GSM767597 IP:total RNA 5-6 days old flies..SRR001348:GSM278693 IP:2'Ome in mutant MUT:ago2 ago2_oxidizedSRR060644:GSM548583 IP:total RNA A2_ovaries_totalV0652: IP:ago1 MUT:dcr2 dcr2 ovary, AGO1-IP, reseqS19:GSM322219 IP:total RNA 2-4day pupae #1SRR317111:GSM767595 IP:total RNA : from 5-6 days old flies..SRR029608: IP:total RNA total small RNAs from hen1 heterozygous fliesGSM379065: IP:total RNA Zuc HeterozygoteGSM379053: MUT:armi Aub MutantSRR317112:GSM767596 IP:total RNA old flies..V083:GSM609223 IP:total RNA male, one daySRR031701:GSM466494 IP:total RNA Total small RNAs from r2d2 heterozygous fliesSRR029028:GSM430030 IP:total RNA untreated (mock)V084:GSM609224 IP:total RNA female, one dayV074: IP:total RNA S3V007:GSM609247 IP:total RNA heat female headSRR029633: IP:total RNA total small RNAs from hen1 homozygous fliesSRR031692:GSM466487 IP:total RNA Total small RNAs from Oregon RSRR317117:GSM767601 IP:total RNA ld flies..SRR010957:SRX002242 IP:aub Aub IP in Ago3 trans-heterozygotesGSM379063: IP:total RNA Vasa HeterozygoteV0882:GSM628271 IP:total RNA MUT:r2d2 r2d2[1] ovary total RNA  SRR031697:GSM466490 IP:total RNA Total small RNAs from dcr-2 heterozygous fliesM065: MUT:CG1091 ovary - sample C, homozygous mutantV077: IP:total RNA cold, female headV138: IP:total RNA Male cold bodyV063:GSM609230 IP:ago1 CS,ovary,AGO1IPSRR351332:GSM811191 IP:total RNA Nibbler ygenotype: control wild type (w, 5905)..SRR001347:GSM278704 IP:total RNA MUT:ago2 ago2_untreated
...........................................................................................................................ATTACTGACAGGAACTGAG................................................................... 19 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.......................................................GCAGGATGGCACAGT........................................................................................................................................... 15 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................tcGGAAAGTACATTGAACTAA......................................................................................... 21 tc 1.00 0.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................tcGGAAAGTACATTGAACTAATT....................................................................................... 23 tc 1.00 0.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
....................................................GCTGCAGGATGGCACAGTCATCGGTG................................................................................................................................... 26 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.......CTTCCGCTTCCAA............................................................................................................................................................................................. 13 7 0.14 0.14 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.14 - -
............GCTTCCAAACGGA........................................................................................................................................................................................ 13 7 0.14 0.14 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.14 -
....................................................................................................................................................................ATCTACGACAGA................................. 12 9 0.11 0.11 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.11