ID:

der_99

 Coordinate:

scaffold_4690:1633142-1633205 +

 Confidence:

novel

 Type:

intronic

 [View on UCSC Genome Browser]
Legend: mature star mismatch in read

Predicted structure

-15.1 -14.9 -14.9

Flybase annnotation

intron [Dere\GG18704-in]

No Repeatable elements found

Sense Strand Reads

ATATCATGAGCAATTTCTCACACGCCAACGAGTTGAATGTTAACAATAACTTAATAATCCGTTTCGCATTTATGAATGATTAAAGCACATAACTTCGAATCGAATTATTAAATCACTGTAACATAATATCACACAATTCCGGTGGATTTAAGCTATACACTGAG
***********************************.((((((.((.....((((((((.((.((((...(((((.............)))))...)))).)).)))))))).....))))))))....************************************ 		Read size # Mismatch Hit Count Total Norm Total V107
male body
malebody
...........................................................................................ACTTCGAATCGAATTATTAAAT................................................... 22 0 1 17.00 17 17
...........................................................................................ACTTCGAATCGAATTATTAAA.................................................... 21 0 1 3.00 3 3
.........................................................................................TAACTTCGAATCGAATTATTAAA.................................................... 23 0 1 1.00 1 1
...........................................................................................ACTTCGAATCGAATTATTGAAT................................................... 22 1 1 1.00 1 1
...........................................................................................ACTTCGAATCGAATTATTAA..................................................... 20 0 1 1.00 1 1
..................................................TTAATAATCCGTTTCGCATTTA............................................................................................ 22 0 1 1.00 1 1
..................................................TTAATAATCCGTTTCGCATTT............................................................................................. 21 0 2 0.50 1 1

Anti-sense strand reads

CTCAGTGTATAGCTTAAATCCACCGGAATTGTGTGATATTATGTTACAGTGATTTAATAATTCGATTCGAAGTTATGTGCTTTAATCATTCATAAATGCGAAACGGATTATTAAGTTATTGTTAACATTCAACTCGTTGGCGTGTGAGAAATTGCTCATGATAT
************************************....((((((((.....((((((((.((.((((...(((((.............)))))...)))).)).)))))))).....)).)))))).*********************************** 		Read size # Mismatch Hit Count Total Norm Total V107
male body
malebody
..............................................................................................AATGCGAAACGGATTATTAAG................................................. 21 0 1 2852.00 2852 2852
..............................................................................................AATGCGAAACGGATTATTAAGT................................................ 22 0 1 2547.00 2547 2547
..............................................................................................AATGCGAAACGGATTATTAAGTT............................................... 23 0 1 128.00 128 128
..............................................................................................AATGCGAAACGGATTATTAA.................................................. 20 0 2 111.50 223 223
..............................................................................................AATGCGAAACGGATTATTAAGTA............................................... 23 1 1 53.00 53 53
..............................................................................................AATGCGAAACGGATTATTAAGTAA.............................................. 24 1 1 48.00 48 48
............................................................................................TAAATGCGAAACGGATTATTAA.................................................. 22 0 1 40.00 40 40
..............................................................................................AATGCGAAACGGATTATTAAGA................................................ 22 1 1 34.00 34 34
.............................................................................................AAATGCGAAACGGATTATTAAG................................................. 22 0 1 34.00 34 34
............................................................................................TAAATGCGAAACGGATTATTAAG................................................. 23 0 1 31.00 31 31
.....................................................TTAATAATTCGATTCGAAGTTA......................................................................................... 22 0 1 26.00 26 26
...............................................................................................ATGCGAAACGGATTATTAAGT................................................ 21 0 1 19.00 19 19
............................................................................................TAAATGCGAAACGGATTATTAAA................................................. 23 1 2 10.00 20 20
...............................................................................................ATGCGAAACGGATTATTAAG................................................. 20 0 1 8.00 8 8
..............................................................................................AATGCAAAACGGATTATTAAGT................................................ 22 1 1 7.00 7 7
..............................................................................................AATGCGAAACGGATTATTAAGTTA.............................................. 24 0 1 6.00 6 6
..............................................................................................AATGCGAAGCGGATTATTAAGT................................................ 22 1 1 5.00 5 5
..............................................................................................AATGCGAAACGGATTATTAAGTAAA............................................. 25 2 1 5.00 5 5
..............................................................................................AATGCGAAGCGGATTATTAAG................................................. 21 1 1 4.00 4 4
..............................................................................................AATGCGAAACGGCTTATTAAGT................................................ 22 1 1 4.00 4 4
............................................................................................TAAATGCGAAACGGATTATTA................................................... 21 0 1 4.00 4 4
..............................................................................................AAGGCGAAACGGATTATTAAGT................................................ 22 1 1 3.00 3 3
..............................................................................................AATGCGAAACGGACTATTAAG................................................. 21 1 1 3.00 3 3
..............................................................................................AATGCGAAACGGATTATCAAG................................................. 21 1 1 3.00 3 3
..............................................................................................AACGCGAAACGGATTATTAAGT................................................ 22 1 1 3.00 3 3
..............................................................................................AATGCGAAACAGATTATTAAG................................................. 21 1 1 3.00 3 3
..............................................................................................AATGCGAAACGGATTATTA................................................... 19 0 2 3.00 6 6
..............................................................................................AGTGCGAAACGGATTATTAAGT................................................ 22 1 1 3.00 3 3
.............................................................................................CAATGCGAAACGGATTATTAAGT................................................ 23 1 1 3.00 3 3
..............................................................................................AATGCTAAACGGATTATTAAG................................................. 21 1 1 3.00 3 3
..............................................................................................AATGCGAAACGGATCATTAAG................................................. 21 1 1 3.00 3 3
..............................................................................................AATGCGAAACGGATTATTAAGC................................................ 22 1 2 2.50 5 5
..............................................................................................AATGCGAAACGGGTTATTAAG................................................. 21 1 1 2.00 2 2
..............................................................................................AATGCGAAATGGATTATTAAGT................................................ 22 1 1 2.00 2 2
..............................................................................................AATACGAAACGGATTATTAAG................................................. 21 1 1 2.00 2 2
................................................................................................TGCGAAACGGATTATTAAGT................................................ 20 0 1 2.00 2 2
..............................................................................................AATGCGAAACGTATTATTAAGT................................................ 22 1 1 2.00 2 2
............................................................................................TAAATGCGAAACGGATTATTAAGT................................................ 24 0 1 2.00 2 2
..............................................................................................AATGCGAAACGGATTATTAAGTC............................................... 23 1 1 2.00 2 2
..............................................................................................AATGCAAAACGGATTATTAAG................................................. 21 1 2 2.00 4 4
..............................................................................................AATACGAAACGGATTATTAAGT................................................ 22 1 1 2.00 2 2
..............................................................................................AATGCGAAACGGATTATTAAGTTT.............................................. 24 1 1 2.00 2 2
..............................................................................................AATGCGAAACGGATTATTAATT................................................ 22 1 1 2.00 2 2
..............................................................................................AATGCGAAACGGATTATTAAGTTAA............................................. 25 1 1 2.00 2 2
..............................................................................................AATGCGAAACTGATTATTAAGT................................................ 22 1 1 2.00 2 2
..............................................................................................AATGCGAAACGGATTATTACGT................................................ 22 1 1 2.00 2 2
................................................................................................TGCGAAACGGATTATTAAG................................................. 19 0 1 2.00 2 2
..............................................................................................AATGCGAAACGGATTATTAACT................................................ 22 1 1 2.00 2 2
..............................................................................................AATGTGAAACGGATTATTAAGT................................................ 22 1 1 2.00 2 2
..............................................................................................AATGCGAAACGGATTATAAAG................................................. 21 1 1 2.00 2 2
.............................................................................................CAATGCGAAACGGATTATTAAG................................................. 22 1 1 2.00 2 2
..............................................................................................AAGGCGAAACGGATTATTAAG................................................. 21 1 1 2.00 2 2
..............................................................................................AATGAGAAACGGATTATTAAG................................................. 21 1 1 2.00 2 2
..............................................................................................ACTGCGAAACGGATTATTAAGT................................................ 22 1 1 2.00 2 2
..............................................................................................AATTCGAAACGGATTATTAAG................................................. 21 1 1 2.00 2 2
.............................................................................................AAATGCGAAACGGATTATTAA.................................................. 21 0 2 2.00 4 4
..............................................................................................AATGCGAAATGGATTATTAAG................................................. 21 1 1 2.00 2 2
..............................................................................................AATGTGAAACGGATTATTAAG................................................. 21 1 1 2.00 2 2
.................................................................................................GCGAAACGGATTATTAAG................................................. 18 0 1 2.00 2 2
..............................................................................................AATGCGAAACTGATTATTAAG................................................. 21 1 1 1.00 1 1
..............................................................................................AATGCGAAACGGATTATTCAGT................................................ 22 1 1 1.00 1 1
..............................................................................................AAGGCGAAACGGATTATTAAGAA............................................... 23 3 1 1.00 1 1
..............................................................................................AATGCGAAACGGATTATTAAGAAA.............................................. 24 2 1 1.00 1 1
..............................................................................................AATGCGAAACGGATTATCAAGT................................................ 22 1 1 1.00 1 1
..............................................................................................AATGCGAAGCGGATTATTAAGTT............................................... 23 1 1 1.00 1 1
..............................................................................................AATGCGAGACGGATTATTAAG................................................. 21 1 1 1.00 1 1
............................................................................................TAAATGCGAAACGGATTATT.................................................... 20 0 1 1.00 1 1
..............................................................................................AATGCGAGACGGATTATTAAGTA............................................... 23 2 1 1.00 1 1
............................................................................................TAAATGCGAAACGGATTATTAAGA................................................ 24 1 1 1.00 1 1
................................................................................................TTCGAAACGGATTATTAAGTT............................................... 21 1 1 1.00 1 1
..............................................................................................AATGCGAAAAGGATTATTAAGT................................................ 22 1 1 1.00 1 1
..............................................................................................AATGCGAAACGGATTATTAGGT................................................ 22 1 1 1.00 1 1
..............................................................................................AATGCGAAACGGATTATTGAGT................................................ 22 1 1 1.00 1 1
..............................................................................................AATGCGAAACGGAATATTAAGT................................................ 22 1 1 1.00 1 1
..............................................................................................AATGCGAGGCGGATTATTAAGT................................................ 22 2 1 1.00 1 1
..............................................................................................AATGCGAAACGGATTATTAAGTTAT............................................. 25 0 1 1.00 1 1
..............................................................................................AACGCGAAACGGATTATTAAG................................................. 21 1 1 1.00 1 1
..............................................................................................AATGCGAAACGGATTATTAAGTG............................................... 23 1 1 1.00 1 1
..............................................................................................AATGCGAAACGGGTTATTAAGT................................................ 22 1 1 1.00 1 1
..............................................................................................AATGCGAAACGGATTCTTAAGT................................................ 22 1 1 1.00 1 1
..............................................................................................AATGCTAAACTGATTATTAAGT................................................ 22 2 1 1.00 1 1
..............................................................................................AGTGCGAAACGGATTATTAAG................................................. 21 1 1 1.00 1 1
..............................................................................................AATGCGAAACCGATTATTAAGT................................................ 22 1 1 1.00 1 1
..............................................................................................AATGCTAAACGGATTATTAAGT................................................ 22 1 1 1.00 1 1
..............................................................................................AATGCGTAACGGATTATTAAG................................................. 21 1 1 1.00 1 1
..............................................................................................AATGAGAAACGGATTATTAAGT................................................ 22 1 1 1.00 1 1
..............................................................................................AATGCGAAACGGATTATTAAGTAT.............................................. 24 2 1 1.00 1 1
................................................................................................AACGAAACGGATTATTAAGT................................................ 20 2 1 1.00 1 1
............................................................................................TAAATGCGAAACGGATTATTAAT................................................. 23 1 1 1.00 1 1
..............................................................................................AATGCTAAACGGATTATTAAGTAA.............................................. 24 2 2 1.00 2 2
..............................................................................................AATGCGAAACGGATTACTAAG................................................. 21 1 1 1.00 1 1
..............................................................................................AATGCGAAACGCATTATTAAGT................................................ 22 1 1 1.00 1 1
............................................................................................TAAATGCGAAACGGATTATTAAAA................................................ 24 2 2 1.00 2 2
..............................................................................................AATGCGAAACGGATTTTTAAGT................................................ 22 1 1 1.00 1 1
..............................................................................................ATTGCGAAACGGATTATTAAGT................................................ 22 1 1 1.00 1 1
..............................................................................................AATTCGAAACGGATTATTAAGT................................................ 22 1 1 1.00 1 1
.....................................................TTAATAATTCGATTCGAAGTTAA........................................................................................ 23 1 1 1.00 1 1
..............................................................................................AATCCGAAACGGATTATTAAGT................................................ 22 1 1 1.00 1 1
..............................................................................................AATGCGAAACGGATTATTAAGTTAAA............................................ 26 2 1 1.00 1 1
..............................................................................................AATGCCAAACGGATTATTAAG................................................. 21 1 1 1.00 1 1
..............................................................................................AATGCGAAACGGATTATTAAGTAC.............................................. 24 2 1 1.00 1 1
............................................................................................TAAATACGAAACGGATTATTAA.................................................. 22 1 1 1.00 1 1
..............................................................................................AAGGCGAAACGGATTATTAAGTT............................................... 23 1 1 1.00 1 1
..............................................................................................AATGCGAAACGGATTCTTCAG................................................. 21 2 1 1.00 1 1
..............................................................................................AATACGAAACGGATTATTAAGTT............................................... 23 1 1 1.00 1 1
..............................................................................................GATGCGAAACGGATTATTAAGT................................................ 22 1 1 1.00 1 1
.............................................................................................AAATGCGAAACGGATTATTAAGT................................................ 23 0 1 1.00 1 1
..............................................................................................AATGCGAAACGGATTCTTAAG................................................. 21 1 1 1.00 1 1
..............................................................................................AATGGGAAACGGATTATTAAG................................................. 21 1 1 1.00 1 1
.....................................................TTAATAATTCGATTCGAAGTTAT........................................................................................ 23 0 1 1.00 1 1
..............................................................................................AATGCCAAACGGATTATTAAGT................................................ 22 1 1 1.00 1 1
.....................................................TTAATAATTCTATTCGAAGTTA......................................................................................... 22 1 1 1.00 1 1
............................................................................................TAAATGCGAAACGGATTATTAAAAA............................................... 25 3 2 1.00 2 2
..............................................................................................AATGCGAAACGGATTATTAGG................................................. 21 1 1 1.00 1 1
..............................................................................................AATGCGCAACGGATTATTAAG................................................. 21 1 1 1.00 1 1
..............................................................................................AGTGCGAAACGGATTCTTAAG................................................. 21 2 1 1.00 1 1
..............................................................................................AATGCGAAACGAATTATTAAG................................................. 21 1 1 1.00 1 1
..............................................................................................AATGCGAAAAGGATTATTAAG................................................. 21 1 1 1.00 1 1
..............................................................................................AATGCGAAACGGATTATTACG................................................. 21 1 1 1.00 1 1
..............................................................................................AATGCGAAACGGATTATTAAT................................................. 21 1 2 0.50 1 1
..............................................................................................AATGCGAAACGGCTTATTAA.................................................. 20 1 2 0.50 1 1
.............................................................................................AAATGCGAAACGGATTATT.................................................... 19 0 2 0.50 1 1
..............................................................................................AATGCGAAACGGATTATTAGT................................................. 21 2 2 0.50 1 1
..............................................................................................AATGCGAAACGGATTATTAAGCT............................................... 23 1 2 0.50 1 1
..............................................................................................AATGGGAAACGGATTATTAA.................................................. 20 1 2 0.50 1 1
..............................................................................................AATGAGAAACGGATTATTAA.................................................. 20 1 2 0.50 1 1
..............................................................................................AATGCGAAACGGATTATTAAATT............................................... 23 1 2 0.50 1 1
..............................................................................................AACGCGAAACGGATTATTAAGC................................................ 22 2 2 0.50 1 1
..............................................................................................AATGCGAAACGGATCATTAA.................................................. 20 1 2 0.50 1 1
.............................................................................................AAATGCGAAACAGATTATTAA.................................................. 21 1 3 0.33 1 1
..............................................................................................AATGCGAAACGGATTATAAG.................................................. 20 2 4 0.25 1 1
.....................................AATATGTTACAGTGCGTTAAT.......................................................................................................... 21 3 4 0.25 1 1
..............................................................................................AATGCGTAACGGATTCTTC................................................... 19 3 17 0.06 1 1

Generated: 01/18/2014 at 01:39 PM