ID:

der_95

 Coordinate:

scaffold_4845:10617254-10617309 -

 Confidence:

novel

 Type:

intergenic

 [View on UCSC Genome Browser]
Legend: mature star mismatch in read

Predicted structure

-23.8 -23.0 -23.0

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

CTGTGAATTTACTATATAACTTATTTATGAAAAAGCTTTAGGATTTAATTTTTCGGACAATGCGATCTAGGCGTTTCTATTGCTGATGTAGTATAGTTTGAAAGATTAAGTTAAAGCGTAATCAACAAAATTTTAAAATGTACAAAAATATGTGTA
***********************************(((((..((((((((((((((((.((((......((((.......))))......)))).)))))))))))))))))))))....************************************ 		Read size # Mismatch Hit Count Total Norm Total V107
male body
malebody
...................................................................................TGATGTAGTATAGTTTGAAAGA................................................... 22 0 1 7.00 7 7
..................................................TTTCGGACAATGCGATCTAGGCGTTTC............................................................................... 27 0 1 2.00 2 2
...................................................................................TGATGTAGTATAGTTTGAAAG.................................................... 21 0 1 2.00 2 2
..................................................TTTCGGACAATGCGATCTAGGCGTT................................................................................. 25 0 1 1.00 1 1
...................................................................................TGATGTAGTATTGTTTGAAAGA................................................... 22 1 2 1.00 2 2
....................................................................................GATGTAGTATAGTTTGAAAGA................................................... 21 0 1 1.00 1 1
...................................................................................CGATGTAGTATTGTTTGAAAGA................................................... 22 2 2 0.50 1 1
....................................................................................GATGTAGTATTGTTTGAAAGA................................................... 21 1 2 0.50 1 1
...................................................................................TGAGGTAGTATAGTTTGAAAGA................................................... 22 1 2 0.50 1 1
....................................................................................TCTGTAGTATTGTTTGAAAGAT.................................................. 22 3 7 0.14 1 1

Anti-sense strand reads

TACACATATTTTTGTACATTTTAAAATTTTGTTGATTACGCTTTAACTTAATCTTTCAAACTATACTACATCAGCAATAGAAACGCCTAGATCGCATTGTCCGAAAAATTAAATCCTAAAGCTTTTTCATAAATAAGTTATATAGTAAATTCACAG
************************************....(((((((((((((((((((((.((((......((((.......))))......)))).))))))))))))))))..)))))*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 01/18/2014 at 01:39 PM