ID:

der_82

 Coordinate:

scaffold_4845:10617479-10617536 -

 Confidence:

novel

 Type:

intergenic

 [View on UCSC Genome Browser]
Legend: mature star mismatch in read

Predicted structure

-25.6

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TTGATTCTGCTTCTTAAATCGCCACCCAACTTATAGTATTCCAAAAATATTTAAGTCTGTTATGCATACTTTTGTGAGTTTGACAAAATGTGCACAACCGGCTTACTGTATTTTTAGAAAACAAACACCTTAGTTGTAAAGAATAAACTAATTGTAAA
***********************************...(((.((((((((.((((((.(((.((((((.((((((.......)))))))))))).))).))))))..)))))))).)))...************************************ 		Read size # Mismatch Hit Count Total Norm Total V107
male body
malebody
......................................................................................AATGTGCACAACCGGCTTACT................................................... 21 0 1 10.00 10 10
......................................................................................AATGTGCACAACCGGCTTACTGT................................................. 23 0 1 6.00 6 6
......................................................................................AATGTGCACAACCGGCTTACTG.................................................. 22 0 1 3.00 3 3
..................................................TTAAGTCTGTTATGCATACT........................................................................................ 20 0 1 3.00 3 3
.....................................................................................AAATGTGCACAACCGGCTTA..................................................... 20 0 1 2.00 2 2
..................................................TTAAGTCTGTTATGCATAC......................................................................................... 19 0 1 1.00 1 1
......................................................................................AATGTGCACAACCGGCTTAC.................................................... 20 0 1 1.00 1 1
..................................................TTAAGTCTGTTATGCATACTTT...................................................................................... 22 0 1 1.00 1 1
......................................................................................AATGTGCACAACCGGCTTACTGAA................................................ 24 1 1 1.00 1 1
......................................................................................AATGTGCACAACCGGCTTACTGTTAA.............................................. 26 3 1 1.00 1 1
.....................................................................................AAATGTGCACAACCGGCTTAA.................................................... 21 1 2 0.50 1 1
..................................................TTAAGTCTGTTATGCATAAT........................................................................................ 20 1 2 0.50 1 1
..................................................TTAAGTCTGTTATGCATAAA........................................................................................ 20 2 3 0.33 1 1
.......................................................................................................TACTGTATTTGTAGAAAAA.................................... 19 2 10 0.10 1 1
..................................................TTAAGTCTGTTATGCAGTTT........................................................................................ 20 3 20 0.05 1 1

Anti-sense strand reads

TTTACAATTAGTTTATTCTTTACAACTAAGGTGTTTGTTTTCTAAAAATACAGTAAGCCGGTTGTGCACATTTTGTCAAACTCACAAAAGTATGCATAACAGACTTAAATATTTTTGGAATACTATAAGTTGGGTGGCGATTTAAGAAGCAGAATCAA
************************************...(((.((((((((..((((((.(((.((((((((((((.......)))))).)))))).))).)))))).)))))))).)))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 01/18/2014 at 01:38 PM