ID:

der_52

 Coordinate:

scaffold_4845:10619176-10619234 -

 Confidence:

novel

 Type:

intergenic

 [View on UCSC Genome Browser]
Legend: mature star mismatch in read

Predicted structure

-27.8 -27.8 -27.3

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TCTCCTGGTAAATAAGTTAAGATGTCTAGAACCTGATTTTCCCAAGTGCATAGTATCAGCAAGGTGTAATTTTTATTTGGGTAAAGTACACGTTACTGGTACTAGGTACTTTGAGAAACATGACTACGGAGAATACCAAACTAGCACTGCAGCTTCAAG
***********************************.(((((..((((((.(((((((((.((.(((((..((((((....))))))))))).)).))))))))).)))))).)))))****************************************** 		Read size # Mismatch Hit Count Total Norm Total V107
male body
malebody
..................................................TAGTATCAGCAAGGTGTAATT........................................................................................ 21 0 1 439.00 439 439
..................................................TAGTATCAGCAAGGTGTAATTT....................................................................................... 22 0 1 405.00 405 405
..................................................TAGTATCAGCAAGGTGTAAT......................................................................................... 20 0 1 331.00 331 331
..................................................TAGTATCAGCAAGGTGTAA.......................................................................................... 19 0 1 30.00 30 30
..................................................TAGTATCAGCAAGGTGTAATTA....................................................................................... 22 1 1 27.00 27 27
..................................................TAGTATCAGCAAGGTGTAATTTT...................................................................................... 23 0 1 12.00 12 12
..................................................TAGTATCAGCAAGGTGTAATTTAA..................................................................................... 24 2 1 9.00 9 9
..................................................TAGTATCAGCAAGGTGTAATTTA...................................................................................... 23 1 1 7.00 7 7
..................................................TAGTATCAGCAAGGTGTAATTAA...................................................................................... 23 2 1 6.00 6 6
..................................................TAGTATCAGCAAGGTGTAATTTTT..................................................................................... 24 0 1 5.00 5 5
................................................CATAGTATCAGCAAGGTGTAA.......................................................................................... 21 0 1 4.00 4 4
................................................CATAGTATCAGCAAGGTGTAAT......................................................................................... 22 0 1 4.00 4 4
..................................................TAGTATCAGCAAGGTGTAATTAAA..................................................................................... 24 3 1 4.00 4 4
..................................................TAGTATCAGCAAGGTGTAATA........................................................................................ 21 1 1 3.00 3 3
..................................................TAGTATCAGCAAGGTGTAATTAT...................................................................................... 23 1 1 3.00 3 3
..................................................TAGTATCAGCAAGGTGTAATTTAAA.................................................................................... 25 2 1 3.00 3 3
..................................................TAGTATCAGCAAGGTGTAATTTAAAA................................................................................... 26 3 1 2.00 2 2
..................................................TATTATCAGCAAGGTGTAATT........................................................................................ 21 1 1 2.00 2 2
..................................................TAGTATCAGCAGGGTGTAATTT....................................................................................... 22 1 1 2.00 2 2
..................................................TAGTATCAGCAAGGGGTAATTT....................................................................................... 22 1 1 2.00 2 2
..................................................TAGTATCAGCAAGGCGTAATT........................................................................................ 21 1 1 2.00 2 2
..................................................TAGTATCAGCAAGGTTTAATT........................................................................................ 21 1 1 2.00 2 2
..................................................TAGTATCAGCAGGGTGTAATT........................................................................................ 21 1 1 2.00 2 2
..................................................TAGTATCAGTAAGGTGTAATTT....................................................................................... 22 1 1 2.00 2 2
..................................................TGGTATCAGCAAGGTGTAATTT....................................................................................... 22 1 1 2.00 2 2
...............................................GCATAGTATCAGCAAGGTGTA........................................................................................... 21 0 1 2.00 2 2
..................................................TGGTATCAGCAAGGTGTAATT........................................................................................ 21 1 1 2.00 2 2
..................................................TAGCATCAGCAAGGTGTAATTTAA..................................................................................... 24 3 1 1.00 1 1
..................................................TAGTATCAGCAAGGTTTAAT......................................................................................... 20 1 1 1.00 1 1
..................................................TAGTATCGGCAAGGTGTAAT......................................................................................... 20 1 1 1.00 1 1
..................................................TAGCATCAGCAAGGTGTAAT......................................................................................... 20 1 1 1.00 1 1
..................................................TAGTATCAGCAAGGTGTAGTTT....................................................................................... 22 1 1 1.00 1 1
..................................................TAGTATCAACAAGGTGTAATT........................................................................................ 21 1 1 1.00 1 1
..................................................TAGTATCAGCATGGTGTAATT........................................................................................ 21 1 1 1.00 1 1
..................................................TAGCATCAGCAAGGTGTAATTT....................................................................................... 22 1 1 1.00 1 1
..................................................TAGTATCAGCAAGGTGCAATT........................................................................................ 21 1 1 1.00 1 1
..................................................TAGCATCAGCAAGGTGTAA.......................................................................................... 19 1 1 1.00 1 1
...............................................GCATAGTATCAGCAAGGTGTAATT........................................................................................ 24 0 1 1.00 1 1
..................................................TAGTATCAGCAAGGTGTAATAAA...................................................................................... 23 3 1 1.00 1 1
..................................................TAGCATCAGCAAGGTGTAATT........................................................................................ 21 1 1 1.00 1 1
................................................CATAGTATCAGCAAGGTGTA........................................................................................... 20 0 1 1.00 1 1
..................................................TATTATCAGCAAGGCGTAATTTT...................................................................................... 23 2 1 1.00 1 1
..................................................TAGTATCAGCAAGGTATAATTT....................................................................................... 22 1 1 1.00 1 1
..................................................TAGTATCAGCAGGGTGTAAT......................................................................................... 20 1 1 1.00 1 1
..................................................TATTATCAGCAAGGTGTAAT......................................................................................... 20 1 1 1.00 1 1
..................................................TAGTATCAACAAGGTGTAATTT....................................................................................... 22 1 1 1.00 1 1
..................................................TAGAATCAGCAAGGTGTAATT........................................................................................ 21 1 1 1.00 1 1
..................................................TAGTATCAGCAAGGCGTAA.......................................................................................... 19 1 1 1.00 1 1
..................................................TAGTATCAGCAAGGGTTAAT......................................................................................... 20 2 1 1.00 1 1
..................................................TAGTATCAGCATGGTGTAAT......................................................................................... 20 1 1 1.00 1 1
..................................................TAGTATCAGCAAGGCGTAATTT....................................................................................... 22 1 1 1.00 1 1
..................................................TAGTATCAGCAAGATGTAATTA....................................................................................... 22 2 1 1.00 1 1
..................................................TAGTATCAGCAAGGAGTAATTT....................................................................................... 22 1 1 1.00 1 1
...............................................GCATAGTATCAGCAAGGTGTAT.......................................................................................... 22 1 1 1.00 1 1
..................................................TAGTATCAGCAAGGTGTAATCT....................................................................................... 22 1 1 1.00 1 1
..................................................TAGTATCAGCAAGTTGTAA.......................................................................................... 19 1 1 1.00 1 1
..................................................TAGTATCAGCAAGGTGTAATTTTAA.................................................................................... 25 1 1 1.00 1 1
..................................................TAGTATCAGCAAGGCGTAAT......................................................................................... 20 1 1 1.00 1 1
..................................................TAGTATCTGCAAGGTGTAATTT....................................................................................... 22 1 1 1.00 1 1
..................................................TAGTATCAGCAAGGTGTA........................................................................................... 18 0 1 1.00 1 1
..................................................GAGTATCAGCAAGGTGTAATTT....................................................................................... 22 1 1 1.00 1 1
..................................................TAGTATTAGCAAGGTGTAATT........................................................................................ 21 1 1 1.00 1 1
......................................................................................TACACGTTACTGGTACTAGGTT................................................... 22 1 2 0.50 1 1
........................................................................................CACGTTACTGGTACTAGGTACT................................................. 22 0 2 0.50 1 1
.............................................................................TGGGTAAAGTACACGTTACTGGTAC......................................................... 25 0 2 0.50 1 1
............................................................................TTGGGTAAAGTACACGTTACTGGTAC......................................................... 26 0 2 0.50 1 1
..................................................TAGTATCAGCGAGGTGTAATT........................................................................................ 21 1 2 0.50 1 1
..................................................TAGTATCAGCAAGGTTAATTT........................................................................................ 21 3 4 0.25 1 1

Anti-sense strand reads

CTTGAAGCTGCAGTGCTAGTTTGGTATTCTCCGTAGTCATGTTTCTCAAAGTACCTAGTACCAGTAACGTGTACTTTACCCAAATAAAAATTACACCTTGCTGATACTATGCACTTGGGAAAATCAGGTTCTAGACATCTTAACTTATTTACCAGGAGA
******************************************(((((.((((((.(((((((((.((.(((((((((((....))))))..))))).)).))))))))).))))))..))))).*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 01/18/2014 at 01:37 PM