ID:

der_45

 Coordinate:

scaffold_4845:10617587-10617649 -

 Confidence:

novel

 Type:

intergenic

 [View on UCSC Genome Browser]
Legend: mature star mismatch in read

Predicted structure

-30.3 -30.1 -30.0

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TGAGAAACATGACTACGGAGAGTACCAAACTAGCACTGCAGCTTCAAGCTTTTCCCCACTCCTTGCTTTAGTACTTATTTTAATGTCGTATTAAAGCCAGAGTTTGGAAAGTTTTGATTCTGCTTCTTAAATCGCCACCCAACTTATAGTATTCCAAAAATAT
***********************************..((((..(((((.((((((..((((...((((((((((.............))))))))))..))))..)))))).)))))..))))....************************************ 		Read size # Mismatch Hit Count Total Norm Total V107
male body
malebody
..........................................................................................TTAAAGCCAGAGTTTGGAAAGT................................................... 22 0 2 441.00 882 882
..........................................................................................TTAAAGCCAGAGTTTGGAAAG.................................................... 21 0 2 329.50 659 659
..........................................................................................TTAAAGCCAGAGTTTGGAAA..................................................... 20 0 2 88.50 177 177
..........................................................................................TTAAAGCCAGAGTTTGGAAAGTA.................................................. 23 1 2 20.50 41 41
..........................................................................................TTAAAGCCAGAGTTTGGAAAGTT.................................................. 23 0 2 13.50 27 27
..........................................................................................TTAAAGCCAGAGTTTGGAAAGA................................................... 22 1 2 10.00 20 20
..........................................................................................TTAAAGCCAGAGTTTGGAAAA.................................................... 21 1 3 8.00 24 24
..........................................................................................TTAAAGCCAGAGTTTGGAA...................................................... 19 0 3 7.33 22 22
..........................................................................................TTAAAGCCAGAGTTTGGAAAGTAA................................................. 24 2 2 4.50 9 9
..........................................................................................TTAAAGCCAGAGTTTGGAAAT.................................................... 21 1 2 3.50 7 7
..........................................................................................TGAAAGCCAGAGTTTGGAAAGT................................................... 22 1 2 3.00 6 6
..................................................TTTCCCCACTCCTTGCTTTAGT........................................................................................... 22 0 2 3.00 6 6
..........................................................................................TTAAAGCCAGAGTTTGGAAAGTAAA................................................ 25 3 2 2.50 5 5
..........................................................................................TTAAAGCCAGCGTTTGGAAAG.................................................... 21 1 2 2.00 4 4
..........................................................................................TTAAAGCCAGAGTTTGAAAAG.................................................... 21 1 2 2.00 4 4
..................................................TTTCCCCACTCCTTGCTTTAG............................................................................................ 21 0 2 2.00 4 4
..........................................................................................TGAAAGCCAGAGTTTGGAAAG.................................................... 21 1 2 2.00 4 4
..........................................................................................TTAAAGCCGGAGTTTGGAAAGT................................................... 22 1 2 1.50 3 3
..........................................................................................TTAAAGCCAGAGATTGGAAAG.................................................... 21 1 2 1.50 3 3
..........................................................................................TTAAAGCCGGAGTTTGGAAA..................................................... 20 1 2 1.50 3 3
..........................................................................................TTAAAGCCAGAGTTTGGAAAGTTA................................................. 24 1 2 1.00 2 2
.........................................................................................ATTAAAGCCAGAGTTTGGAAA..................................................... 21 0 2 1.00 2 2
..........................................................................................TTAAAGCCAGAGTTTGGAAAGC................................................... 22 1 2 1.00 2 2
..........................................................................................TTAAAGCCGGAGTTTGGAAAG.................................................... 21 1 2 1.00 2 2
..........................................................................................TTAAAGTCAGAGTTTGGAAAGT................................................... 22 1 2 1.00 2 2
..........................................................................................TTAAAGCCAGAGTTTGGGAAGT................................................... 22 1 2 1.00 2 2
..........................................................................................TTAAAGCCAGAGGTTGGAAAG.................................................... 21 1 2 1.00 2 2
..........................................................................................TTAAAGCCAGAGTTTGGAAAGG................................................... 22 1 2 1.00 2 2
..........................................................................................TTAAATCCAGAGTTTGGAAAGT................................................... 22 1 2 1.00 2 2
...........................................................................................TAAAGCCAGAGTTTGGAAAGT................................................... 21 0 2 1.00 2 2
..........................................................................................TTAAAGCCAGATTTTGGAAAGT................................................... 22 1 2 1.00 2 2
..........................................................................................TTAAAGCCAGAGTTTGGAAAAA................................................... 22 2 3 1.00 3 3
..........................................................................................TTAAAGCTAGAGTTTGGAAAG.................................................... 21 1 2 1.00 2 2
..........................................................................................TTAAAGCCAGCGTTTGGAAAGT................................................... 22 1 2 1.00 2 2
..........................................................................................TTAAAGCCAGAGTTTGGAAAGAT.................................................. 23 1 2 1.00 2 2
..........................................................................................TTAAAGCCAGAGTTTGGCAAG.................................................... 21 1 2 1.00 2 2
..........................................................................................TTAAAGCCGGAGTTTGGAA...................................................... 19 1 3 0.67 2 2
..........................................................................................TTAAAGCCAGAGTTTGGAAT..................................................... 20 1 3 0.67 2 2
..........................................................................................TTAAAGCCAGAGTTTGGAAAGTG.................................................. 23 1 2 0.50 1 1
.............................................................................TTGTAATGTCGTATTAAAGCCAGAGT............................................................ 26 1 2 0.50 1 1
..........................................................................................TTAAAGCAAGAGTTTGGAAAGT................................................... 22 1 2 0.50 1 1
..........................................................................................TTAAAGCCAGAGGTTTGAAAGT................................................... 22 2 2 0.50 1 1
..........................................................................................TTAAAGCCAGAGTTTAGAAAGT................................................... 22 1 2 0.50 1 1
..........................................................................................TGAAAGCCAGAGTTTGGAAGG.................................................... 21 2 2 0.50 1 1
..........................................................................................TTAATGCCAGAGTTTGGAAAGT................................................... 22 1 2 0.50 1 1
..........................................................................................TTAAAGCCAGAGTTTGTAAAGTT.................................................. 23 1 2 0.50 1 1
..........................................................................................TTAAAGCCGGAGTTTGGAAAGTA.................................................. 23 2 2 0.50 1 1
..........................................................................................TTAAAGCCAGAGTTTGGGAAG.................................................... 21 1 2 0.50 1 1
..........................................................................................TTAAAGCCGGAGTTTGGAGAGT................................................... 22 2 2 0.50 1 1
..........................................................................................TTAAATCCAGAGTTTGGAAAG.................................................... 21 1 2 0.50 1 1
..........................................................................................TTAACGCCAGAGTTTGGAAAGT................................................... 22 1 2 0.50 1 1
..........................................................................................TTGAAGCCAGAGTTTGGAAAG.................................................... 21 1 2 0.50 1 1
..........................................................................................TAAAAGCCAGAGTTTGGAAAGT................................................... 22 1 2 0.50 1 1
..........................................................................................TTAAAGCCAGAGTTTGAAAA..................................................... 20 1 2 0.50 1 1
..........................................................................................TTAAATCCAGAGTTTGGAAAGC................................................... 22 2 2 0.50 1 1
..........................................................................................TTAAAGCCAGAGTTTGCAAAG.................................................... 21 1 2 0.50 1 1
..........................................................................................TTAAAGCCAGAGTTTGGACAGT................................................... 22 1 2 0.50 1 1
...........................................................................................TAAAGCCAGAGTTTGGAAAGTC.................................................. 22 1 2 0.50 1 1
..........................................................................................TGAAAGCCAGAGTTTGGAAAGTT.................................................. 23 1 2 0.50 1 1
..........................................................................................TTAAAACCAGAGTTTGGAAAG.................................................... 21 1 2 0.50 1 1
..........................................................................................TTAAAGCCAGAGTTTGAAAAGT................................................... 22 1 2 0.50 1 1
..........................................................................................TTAAAGCCAGAGTCTGGAAAG.................................................... 21 1 2 0.50 1 1
..........................................................................................TTAAGGCCAGAGTTTGGAAAG.................................................... 21 1 2 0.50 1 1
..........................................................................................TTAAACCCAGAGTTTGGAAAG.................................................... 21 1 2 0.50 1 1
..........................................................................................TTAAAGACAGAGTTTGGAAAG.................................................... 21 1 2 0.50 1 1
.................................................................................AATGTCGTATTAAAGCCAGAGTTTGG........................................................ 26 0 2 0.50 1 1
..........................................................................................TTAAAGCCAGAGTTTGGAGAGT................................................... 22 1 2 0.50 1 1
..........................................................................................TTAAAGCCAGAGTTTGGAAAGAA.................................................. 23 2 2 0.50 1 1
..........................................................................................TTAAAGCCATAGTTTGGAAAG.................................................... 21 1 2 0.50 1 1
...........................................................................................TAAAGCCAGAGTTTGGAAAG.................................................... 20 0 2 0.50 1 1
..........................................................................................TTAAAGCCAGAGATTGGAAAA.................................................... 21 2 3 0.33 1 1
..........................................................................................TTAAAGCCAGAGTTTGGAAG..................................................... 20 1 3 0.33 1 1

Anti-sense strand reads

ATATTTTTGGAATACTATAAGTTGGGTGGCGATTTAAGAAGCAGAATCAAAACTTTCCAAACTCTGGCTTTAATACGACATTAAAATAAGTACTAAAGCAAGGAGTGGGGAAAAGCTTGAAGCTGCAGTGCTAGTTTGGTACTCTCCGTAGTCATGTTTCTCA
************************************....((((..(((((.((((((..((((..((((((((((.............))))))))))...))))..)))))).)))))..))))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 01/18/2014 at 01:37 PM