ID:

der_30

 Coordinate:

scaffold_4690:9682476-9682538 +

 Confidence:

novel

 Type:

intergenic

 [View on UCSC Genome Browser]
Legend: mature star mismatch in read

Predicted structure

-38.4

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

GAGTGAATCAGGAAAACAGAACCACTAACTCAGCACTGGGCATGTCCTCCAAGCGAGCAAAGAAGTAGTATTTGTGTTCCAAAAGTCAAATATAACTTTTTTGGAAGCTACGGGGATTTGCCCAAGCCAACTTGCTGCTTTTAAGTGTGTTCGATTGGATTTA
***********************************.((((((.((((((..(((...(((((((((.(((((((............))))))).)))))))))...)))..)))))).))))))...************************************ 		Read size # Mismatch Hit Count Total Norm Total V107
male body
malebody
..................................................AAGCGAGCAAAGAAGTAGTATT........................................................................................... 22 0 1 2953.00 2953 2953
..................................................AAGCGAGCAAAGAAGTAGTATTT.......................................................................................... 23 0 1 1458.00 1458 1458
..........................................................................................TATAACTTTTTTGGAAGCTACG................................................... 22 0 1 155.00 155 155
..................................................AAGCGAGCAAAGAAGTAGTAT............................................................................................ 21 0 1 84.00 84 84
..................................................AAGCGAGCAAAGAAGTAGTATTTT......................................................................................... 24 1 1 41.00 41 41
..................................................AATCGAGCAAAGAAGTAGTATT........................................................................................... 22 1 1 24.00 24 24
..................................................AATCGAGCAAAGAAGTAGTATTT.......................................................................................... 23 1 1 10.00 10 10
..................................................AAGCGAGCAAAGAAGTAGTA............................................................................................. 20 0 1 10.00 10 10
..................................................AAGCGAGCAAAGAAGCAGTATT........................................................................................... 22 1 1 7.00 7 7
..................................................AGGCGAGCAAAGAAGTAGTATT........................................................................................... 22 1 1 7.00 7 7
..........................................................................................TATAACTTTTTTGGAAGCTACGT.................................................. 23 1 1 7.00 7 7
..................................................AAGCGAGCAAAGAGGTAGTATT........................................................................................... 22 1 1 6.00 6 6
..................................................AAGCGAGCAGAGAAGTAGTATT........................................................................................... 22 1 1 5.00 5 5
..................................................AAGCGAGCAAAGAAGAAGTATT........................................................................................... 22 1 1 5.00 5 5
..................................................AAGCGAGCAAAGAAGTAGTATTTA......................................................................................... 24 1 1 5.00 5 5
..................................................AAGCGAGCAACGAAGTAGTATT........................................................................................... 22 1 1 4.00 4 4
..................................................AAGCGAGCAAAGAAGTATTATT........................................................................................... 22 1 1 4.00 4 4
..................................................AGGCGAGCAAAGAAGTAGTATTT.......................................................................................... 23 1 1 4.00 4 4
..................................................AAGCGAGCAAAGAAGTAGCATT........................................................................................... 22 1 1 4.00 4 4
.........................................................................................ATATAACTTTTTTGGAAGCTACG................................................... 23 0 1 4.00 4 4
..................................................AAGCGAGCAAAGAAGTATTATTT.......................................................................................... 23 1 1 4.00 4 4
..................................................AAGCGAGCAAAGAAGTAGT.............................................................................................. 19 0 1 4.00 4 4
..................................................AAGCGAGCAAATAAGTAGTATT........................................................................................... 22 1 1 4.00 4 4
..................................................AAGCGAGCAAAGAAGTACTATTT.......................................................................................... 23 1 1 3.00 3 3
..................................................AAGCGAGCAAAGAAGTAGTATTTG......................................................................................... 24 0 1 3.00 3 3
..................................................GAGCGAGCAAAGAAGTAGTATT........................................................................................... 22 1 1 3.00 3 3
...................................................AGCGAGCAAAGAAGTAGTATT........................................................................................... 21 0 1 3.00 3 3
..................................................AAGCGAGTAAAGAAGTAGTATT........................................................................................... 22 1 1 3.00 3 3
..................................................AAGCTAGCAAAGAAGTAGTATT........................................................................................... 22 1 1 3.00 3 3
..................................................AAGCGAGCAAAGAATTAGTATT........................................................................................... 22 1 1 3.00 3 3
..................................................AAGCGAGCAAAGAAGGAGTATT........................................................................................... 22 1 1 3.00 3 3
..................................................AAGCGAGCAAAGAAGTGGTATT........................................................................................... 22 1 1 3.00 3 3
..................................................AAGCGACCAAAGAAGTAGTATTT.......................................................................................... 23 1 1 3.00 3 3
..................................................AAGCGATCAAAGAAGTAGTATTT.......................................................................................... 23 1 1 3.00 3 3
..................................................AACCGAGCAAAGAAGTAGTATT........................................................................................... 22 1 1 3.00 3 3
.........................................................................................................AGGTACGGGGATCTGCCC........................................ 18 2 2 2.50 5 5
..................................................AAGCGAGCAAAGCAGTAGTATT........................................................................................... 22 1 1 2.00 2 2
..................................................AAGCTAGCAAAGAAGTAGTATTT.......................................................................................... 23 1 1 2.00 2 2
..................................................AAGCGAGCAAAGAAGTAGTTTT........................................................................................... 22 1 1 2.00 2 2
..................................................AAGCGAGCAACGAAGTAGTATTT.......................................................................................... 23 1 1 2.00 2 2
..................................................AAGCGAGCAAAGAAGTAGAATT........................................................................................... 22 1 1 2.00 2 2
..................................................AAGCGAGCAAAGTAGTAGTATT........................................................................................... 22 1 1 2.00 2 2
..................................................AAGCGAGCAAAGAAGCAGTATTT.......................................................................................... 23 1 1 2.00 2 2
..................................................AAGCGAGCAAAGATGTAGTATT........................................................................................... 22 1 1 2.00 2 2
..................................................AAGCGAGCAAAGAGGTAGTATTT.......................................................................................... 23 1 1 2.00 2 2
..................................................AAGCGAGCAAAGAAGAAGTATTT.......................................................................................... 23 1 1 2.00 2 2
..........................................................................................TATAACTTTTTTGGAAGCTA..................................................... 20 0 1 2.00 2 2
..................................................AAACGAGCAAAGAAGTAGTATT........................................................................................... 22 1 1 2.00 2 2
..................................................AACCGAGCAAAGAAGTAGTATTT.......................................................................................... 23 1 1 2.00 2 2
...................................................AGCGAGCAAAGAAGTAGTATTT.......................................................................................... 22 0 1 2.00 2 2
..................................................AAGCGAGCAAGGAAGTAGTATTT.......................................................................................... 23 1 1 2.00 2 2
..................................................AAGCGATCAAAGAAGTAGTATT........................................................................................... 22 1 1 2.00 2 2
..................................................AAGCGACCAAAGAAGTAGTATT........................................................................................... 22 1 1 2.00 2 2
.........................................................................................ATATAACTTTTTTGGAAGCTACGT.................................................. 24 1 1 2.00 2 2
..................................................AAGCGAGCACAGAAGTAGTATTT.......................................................................................... 23 1 1 2.00 2 2
..................................................AAGCGAGCAAAGACGTAGTATT........................................................................................... 22 1 1 2.00 2 2
..................................................AAGCGGGCAAAGAAGTAGTATT........................................................................................... 22 1 1 2.00 2 2
..................................................AAGCGAGCAAATAAGTAGAATTT.......................................................................................... 23 2 1 1.00 1 1
..................................................AAGCGAGCAAAGAAGTAGTGT............................................................................................ 21 1 1 1.00 1 1
....................................................GCGAGCAAAGAAGTAGTATTT.......................................................................................... 21 0 1 1.00 1 1
..................................................AAGCGAGCAAATAAGTAGTATTT.......................................................................................... 23 1 1 1.00 1 1
.................................................CAAGCGAGCAAAGAAGTAGTATT........................................................................................... 23 0 1 1.00 1 1
..................................................AAGCGAGCAAAGAGGTAGTAT............................................................................................ 21 1 1 1.00 1 1
.................................................CAAGCGAGCAAAGAAGTAGTATTTT......................................................................................... 25 1 1 1.00 1 1
..................................................AAGCGAGCCAAGAAGTAGTATT........................................................................................... 22 1 1 1.00 1 1
..................................................AAGCGAGCAAAGAAGTAGTATC........................................................................................... 22 1 1 1.00 1 1
..................................................AAGCGAGCAAAGAAGTAGTCTT........................................................................................... 22 1 1 1.00 1 1
....................................................ACGAGCAAAGAAGTAGTATT........................................................................................... 20 1 1 1.00 1 1
..................................................AAGCGAGCAAAGAAGTAGGATT........................................................................................... 22 1 1 1.00 1 1
..................................................AAGCGAACAAAGAAGTAGTATT........................................................................................... 22 1 1 1.00 1 1
..................................................AAGCGAGAAAAGAAGTAGTATTT.......................................................................................... 23 1 1 1.00 1 1
..................................................AAGCGAGCAAAGAAGTAGTATATTT........................................................................................ 25 2 1 1.00 1 1
.....................................................CGAGCAAAGAAGTAGTATT........................................................................................... 19 0 1 1.00 1 1
..................................................AAGCCAGCAAAGAAGTAGTATT........................................................................................... 22 1 1 1.00 1 1
...................................................AGCGAGCAAAGAAGTAGTAT............................................................................................ 20 0 1 1.00 1 1
..................................................AAGCGAGCAAAGAAGTAGTATTTTTT....................................................................................... 26 2 1 1.00 1 1
..................................................AAGCGAGCAAACAAGTAGTATT........................................................................................... 22 1 1 1.00 1 1
..........................................................................................TATAACCTTTTTGGAAGCTACG................................................... 22 1 1 1.00 1 1
......................................................GAGCAAAGAAGTAGTATT........................................................................................... 18 0 1 1.00 1 1
..................................................CAGCGAGCAAAGAAGTAGTATT........................................................................................... 22 1 1 1.00 1 1
..................................................AAGCGAGCAAAGAAGTAGTATCT.......................................................................................... 23 1 1 1.00 1 1
..........................................................................................TATAACTTTTTTGGCAGCTACG................................................... 22 1 1 1.00 1 1
..................................................TAGCGAGCAAAGAAGTAGTATTT.......................................................................................... 23 1 1 1.00 1 1
..................................................AAGCGAGCAATGAAGTAGTATTT.......................................................................................... 23 1 1 1.00 1 1
..................................................AAGCGAGCAAAGAAGTAGTATTAA......................................................................................... 24 2 1 1.00 1 1
..................................................AAGCGAGTAAAGAAGTAGTATTT.......................................................................................... 23 1 1 1.00 1 1
..................................................AAGCGAGGAACGAAGTAGTATTT.......................................................................................... 23 2 1 1.00 1 1
..................................................AAGCGAGCAAAGAAGTAGAATTT.......................................................................................... 23 1 1 1.00 1 1
..................................................AAGCGAGCGAAGAAGTAGTATT........................................................................................... 22 1 1 1.00 1 1
..........................................................................................TATAACTTTTTTTGAAGCTACGT.................................................. 23 2 1 1.00 1 1
..................................................AAGCGAGCAAAGCAGTAGTATTTT......................................................................................... 24 2 1 1.00 1 1
..................................................AAGAGAGCAAAGAAGTAGTATT........................................................................................... 22 1 1 1.00 1 1
..................................................AAGCGTGCAAAGAAGTAGTATTT.......................................................................................... 23 1 1 1.00 1 1
..................................................AAGCGAGCCAAGAAGTAGTATTT.......................................................................................... 23 1 1 1.00 1 1
..................................................AATCGAGCAAAGAGGTAGTATT........................................................................................... 22 2 1 1.00 1 1
............................................................................................TAACTTTTTTGGAAGCTACG................................................... 20 0 1 1.00 1 1
...................................................AACGAGCAAAGAAGTAGTATT........................................................................................... 21 1 1 1.00 1 1
..................................................AAGCGAGCAAAGAAGTAGTACT........................................................................................... 22 1 1 1.00 1 1
..................................................AAGCGAGCAAAGAAGTCGTATT........................................................................................... 22 1 1 1.00 1 1
..................................................AAGCGAGCAAGGAAGTAGTATT........................................................................................... 22 1 1 1.00 1 1
..................................................AAGTGAGCAAAGAAGTAGTATT........................................................................................... 22 1 1 1.00 1 1
....................................................GCGAGCAAAGAAGTAGTATT........................................................................................... 20 0 1 1.00 1 1
..................................................AAGCCAGCAAAGAAGTAGTATTT.......................................................................................... 23 1 1 1.00 1 1
..................................................AATCGAGCAAAGAAGTAGTATTTT......................................................................................... 24 2 1 1.00 1 1
..................................................AAGCGAGCAAAGAAGTAGGATTT.......................................................................................... 23 1 1 1.00 1 1
..................................................AAGCGAGCAAAGAAGTAGTTATT.......................................................................................... 23 2 1 1.00 1 1
..................................................AAGCGAGCAAAGTAGTAGTATTT.......................................................................................... 23 1 1 1.00 1 1
..................................................AAGCGAGCAAAGAAGTAGTATTG.......................................................................................... 23 1 1 1.00 1 1
..................................................AAGCGAGCAAAAAAGTAGTATT........................................................................................... 22 1 1 1.00 1 1
..................................................AAGCGAGAAAAGAAGTAGTATT........................................................................................... 22 1 1 1.00 1 1
..................................................AAGCGTGCAAAGAAGTAGTATT........................................................................................... 22 1 1 1.00 1 1
..................................................AAGCGAGCAAACAAGTATTATT........................................................................................... 22 2 1 1.00 1 1
..................................................AAGCGAGCGAAGAAGTAGTATTT.......................................................................................... 23 1 1 1.00 1 1
..................................................ACGCGAGCAAAGAAGTAGTATT........................................................................................... 22 1 1 1.00 1 1
...........................................................................................ATAACTTTTTTGGAAGCTACG................................................... 21 0 1 1.00 1 1
...................................................AACGAGCAAAGAAGTAGTATTT.......................................................................................... 22 1 1 1.00 1 1
..................................................AAGCGAGCAAAGAACTAGTATTT.......................................................................................... 23 1 1 1.00 1 1
..........................................................................................TATAACTTTTTTGGAAGCTAC.................................................... 21 0 1 1.00 1 1
..................................................AAGCGAGCAACGAAGTCGTATT........................................................................................... 22 2 1 1.00 1 1
..................................................AAGCGAGCAAAGGAGTAGTATT........................................................................................... 22 1 1 1.00 1 1
..................................................AAGCGAGCAAAGAAGTAGTATA........................................................................................... 22 1 1 1.00 1 1
..................................................AAGCGAGCAAAGAAGTAGTACTT.......................................................................................... 23 1 1 1.00 1 1
.........................................................................................ATATAACTTTTTTGGAAGCTAC.................................................... 22 0 1 1.00 1 1
..........................................................................................TACAACTTTTTTGTAAGCTACG................................................... 22 2 2 0.50 1 1
..................................................AAGCTAGCAAATAAGTAGTAT............................................................................................ 21 2 2 0.50 1 1
...................................................AAGCAGCAAAGAAGTAGTATTT.......................................................................................... 22 3 4 0.25 1 1
........................................................................................................GAGGTACGGGGATCTGCCC........................................ 19 3 8 0.25 2 2
........................................................................................................GAGGTACGGGGATCTGCC......................................... 18 3 20 0.15 3 3
..................................................AAGCGAGCAAAGAAGTTATTT............................................................................................ 21 3 10 0.10 1 1

Anti-sense strand reads

TAAATCCAATCGAACACACTTAAAAGCAGCAAGTTGGCTTGGGCAAATCCCCGTAGCTTCCAAAAAAGTTATATTTGACTTTTGGAACACAAATACTACTTCTTTGCTCGCTTGGAGGACATGCCCAGTGCTGAGTTAGTGGTTCTGTTTTCCTGATTCACTC
************************************...((((((.((((((..(((...(((((((((.(((((((............))))))).)))))))))...)))..)))))).)))))).*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 01/18/2014 at 01:37 PM