ID:

der_169

 Coordinate:

scaffold_4690:1633026-1633099 -

 Confidence:

novel

 Type:

antisense_to_intron

 [View on UCSC Genome Browser]
Legend: mature star mismatch in read

Predicted structure

-24.6 -24.2 -23.9

Flybase annnotation

Antisense to intron [Dere\GG18704-in]

No Repeatable elements found

Sense Strand Reads

ATTATTAAGTTATTGTTAACATTCAACTCGTTGGCGTGTGAGAAATTGCTCATGATATGCGATTCGGAACCATTCACTGCTGTTTTTCAATTTTCAGTGAATGATATCGAATGGCTCATTATTTGTATGATACGAACATCTCAATTTAATAACCGAAAATATGTGATAATAGAT
******************************************....(((..(((((..((.((((((...(((((((((..(((....)))...)))))))))...)))))).))..)))))..)))......***************************************** 		Read size # Mismatch Hit Count Total Norm Total V107
male body
malebody
.........................................................TGCGATTCGGAACCATTCACTG............................................................................................... 22 0 1 1995.00 1995 1995
.........................................................TGCGATTCGGAACCATTCACT................................................................................................ 21 0 1 538.00 538 538
.........................................................TGCGATTCGGAACCATTCAC................................................................................................. 20 0 1 67.00 67 67
.........................................................TGCGATTCGGAACCATTCACTGT.............................................................................................. 23 1 1 43.00 43 43
.........................................................TGCGATTCGGAACCATTCA.................................................................................................. 19 0 1 28.00 28 28
.........................................................TGCGATTCGGAACCATTCACTA............................................................................................... 22 1 1 21.00 21 21
.........................................................TGCGATTCGGAACCATTCACTGA.............................................................................................. 23 1 1 14.00 14 14
.........................................................TTCGATTCGGAACCATTCACTG............................................................................................... 22 1 1 13.00 13 13
.........................................................TGCGATTCGGAACCATTCACTT............................................................................................... 22 1 1 9.00 9 9
................................................................................................GTGAATGATATCGAATGGCTCA........................................................ 22 0 1 6.00 6 6
.........................................................TCCGATTCGGAACCATTCACTG............................................................................................... 22 1 1 6.00 6 6
.........................................................TGCGCTTCGGAACCATTCACTG............................................................................................... 22 1 1 5.00 5 5
.........................................................TGCGATTCGGAACCATTCACTGTT............................................................................................. 24 1 1 5.00 5 5
.........................................................TGCGATTCGGAACCATTCAA................................................................................................. 20 1 1 4.00 4 4
.........................................................TTCGATTCGGAACCATTCACT................................................................................................ 21 1 1 4.00 4 4
.........................................................TGCGATTCGGAACCATTCACA................................................................................................ 21 1 1 4.00 4 4
.........................................................TGCGATTCTGAACCATTCACTG............................................................................................... 22 1 1 4.00 4 4
.........................................................TGCGATCCGGAACCATTCACTG............................................................................................... 22 1 1 3.00 3 3
.........................................................TGCGATTTGGAACCATTCACTG............................................................................................... 22 1 1 3.00 3 3
.........................................................TGCGACTCGGAACCATTCACTG............................................................................................... 22 1 1 2.00 2 2
.........................................................TGCGATTCTGAACCATTCACT................................................................................................ 21 1 1 2.00 2 2
.........................................................TGCAATTCGGAACCATTCACTG............................................................................................... 22 1 1 2.00 2 2
.........................................................TGCGATTCGGAACCATTAACTG............................................................................................... 22 1 1 2.00 2 2
.........................................................TGCGATTCGTAACCATTCACTG............................................................................................... 22 1 1 2.00 2 2
.........................................................TGCGATTCGGAACCATTCACTAA.............................................................................................. 23 2 1 2.00 2 2
.........................................................TGCGATTCGGAACCATTCACTGTTA............................................................................................ 25 2 1 2.00 2 2
.........................................................CGCGATTCGGAACCATTCACTG............................................................................................... 22 1 1 2.00 2 2
.........................................................TGCGATTCGGAACCACTCACT................................................................................................ 21 1 1 2.00 2 2
.........................................................TGCGATTCGGAACCTTTCACT................................................................................................ 21 1 1 2.00 2 2
.........................................................TGCGATTCGGAACTATTCACT................................................................................................ 21 1 1 2.00 2 2
..........................................................TCGATTCGGAACCATTCACTG............................................................................................... 21 1 1 2.00 2 2
.........................................................TGTGATTCGGAACCATTCACTG............................................................................................... 22 1 1 2.00 2 2
.........................................................GGCGATTCGGAACCATTCACTG............................................................................................... 22 1 1 2.00 2 2
.........................................................TGTGATTCGGAACCATTCACT................................................................................................ 21 1 1 1.00 1 1
.........................................................TGCGATTCGGAACCATTCACTGTAT............................................................................................ 25 3 1 1.00 1 1
.........................................................TGCGATTCGGCACCATTCA.................................................................................................. 19 1 1 1.00 1 1
.........................................................TGCGATTCGGAATCATTCACTG............................................................................................... 22 1 1 1.00 1 1
.........................................................TGCGATTCGGAACCATTCACTGTTTT........................................................................................... 26 2 1 1.00 1 1
.........................................................CGGGATTCGGCACCATTCACTG............................................................................................... 22 3 1 1.00 1 1
.........................................................TGCGATTCGGAACCATCCACT................................................................................................ 21 1 1 1.00 1 1
...........................................................CGATTCGGAACCATTCACTG............................................................................................... 20 0 1 1.00 1 1
.........................................................TGCGATTCGGAACCATTCACTGC.............................................................................................. 23 0 1 1.00 1 1
.........................................................TGCGATTCGGAACCATTCACTGTTT............................................................................................ 25 2 1 1.00 1 1
.........................................................TGCGATTCGGAACCATTCACTTT.............................................................................................. 23 2 1 1.00 1 1
.........................................................TGCGATTCGGAACCATTCGC................................................................................................. 20 1 1 1.00 1 1
............................................................GATTCGGAACCATTCACTG............................................................................................... 19 0 1 1.00 1 1
.........................................................TACGATTCGGAACCATTCACT................................................................................................ 21 1 1 1.00 1 1
.........................................................TACGATTCGGAACCATTCACTG............................................................................................... 22 1 1 1.00 1 1
.........................................................TGCGATTCGGAACCATTTACTG............................................................................................... 22 1 1 1.00 1 1
.........................................................TGCGATTCGTAACCATTCACTGT.............................................................................................. 23 2 1 1.00 1 1
.........................................................TGCGATTCGGAACCACTCACTG............................................................................................... 22 1 1 1.00 1 1
.........................................................TGCGATTCGGAACCATTCACC................................................................................................ 21 1 1 1.00 1 1
.........................................................TGCGATTCGGAACCATTCACTAT.............................................................................................. 23 2 1 1.00 1 1
.........................................................TGCGATTCGGAGCCATTCA.................................................................................................. 19 1 1 1.00 1 1
.........................................................TGCGATTCGAAACCATTCACTG............................................................................................... 22 1 1 1.00 1 1
.........................................................TCCGATTCGGAACCATTCACT................................................................................................ 21 1 1 1.00 1 1
.........................................................TGCGATTCGGAACCATTCACTGATT............................................................................................ 25 2 1 1.00 1 1
.........................................................TGCGCTTCGGAACCCTTCACTG............................................................................................... 22 2 1 1.00 1 1
.........................................................TGAGATTCGGAACCATTCACTG............................................................................................... 22 1 1 1.00 1 1
.........................................................TGCGATTCGGAACCATTCACCGT.............................................................................................. 23 2 1 1.00 1 1
.........................................................TGCGATTCCGAACCATTCAC................................................................................................. 20 1 1 1.00 1 1
.........................................................TGCGATTCGGTACCATTCACTG............................................................................................... 22 1 1 1.00 1 1
.........................................................TGCGATTCGGCACCATTCACTG............................................................................................... 22 1 1 1.00 1 1
........................................................CTGCGATTCGGAACCATTCACTG............................................................................................... 23 1 1 1.00 1 1
.........................................................TGCGATTCGGAACCGTTCACTG............................................................................................... 22 1 1 1.00 1 1
.........................................................TGCGTTTCGGAACCATTCACTG............................................................................................... 22 1 1 1.00 1 1
...........................................................CGATTCGGAACCATTCACTA............................................................................................... 20 1 1 1.00 1 1
.........................................................AGCGATTCGGAACCATTCACT................................................................................................ 21 1 1 1.00 1 1
.........................................................TGCGATTCGGAACCATTCACTGTAA............................................................................................ 25 3 1 1.00 1 1
.........................................................GGCGATTCGGAACCATTCACT................................................................................................ 21 1 1 1.00 1 1
.........................................................TGCGATTCGGAACCATTCGCTG............................................................................................... 22 1 1 1.00 1 1
..........................................................TGGATTCGGAACCATTCACT................................................................................................ 20 2 1 1.00 1 1
.........................................................TGCGATTCGGAACCATCCACTG............................................................................................... 22 1 1 1.00 1 1
.........................................................TGCGATTCGGAACTATTCACTG............................................................................................... 22 1 1 1.00 1 1
............................................................GATTCGGAACCATTCACT................................................................................................ 18 0 1 1.00 1 1
.........................................................TGCGATTCGGAACCCTTCACTG............................................................................................... 22 1 1 1.00 1 1
.........................................................TGCGATTCGGAGCCATTCACTG............................................................................................... 22 1 1 1.00 1 1
.........................................................TGCGATCCGGAACCATTCACT................................................................................................ 21 1 1 1.00 1 1
.........................................................TGCTATTCGGAACCATTCACTGT.............................................................................................. 23 2 1 1.00 1 1
.........................................................TGCGATTCGGGACCATTCACTG............................................................................................... 22 1 1 1.00 1 1
.........................................................TGCGATTCGGAACCATTCT.................................................................................................. 19 1 1 1.00 1 1
.........................................................TGCGATTCGGAACCATTCAAA................................................................................................ 21 2 1 1.00 1 1
.........................................................TACGATTCGGAACCATTCACTGT.............................................................................................. 23 2 1 1.00 1 1
..........................................................GCGATTCGGAACCATTCACTG............................................................................................... 21 0 1 1.00 1 1
.........................................................TGCGATTCGGAACAATTCACT................................................................................................ 21 1 1 1.00 1 1
.........................................................TGCGATTCGGAACCATTCACTGCT............................................................................................. 24 0 1 1.00 1 1
.........................................................TGCGATTCAGAACCATTCACTG............................................................................................... 22 1 1 1.00 1 1
.........................................................TGCGGTTCGGCACCGTTCACTG............................................................................................... 22 3 2 0.50 1 1
.........................................................TGCGATTCTCAACCCTTCACTG............................................................................................... 22 3 2 0.50 1 1
..........................................................TGCATTCGGAACCATTCACT................................................................................................ 20 3 9 0.22 2 2

Anti-sense strand reads

ATCTATTATCACATATTTTCGGTTATTAAATTGAGATGTTCGTATCATACAAATAATGAGCCATTCGATATCATTCACTGAAAATTGAAAAACAGCAGTGAATGGTTCCGAATCGCATATCATGAGCAATTTCTCACACGCCAACGAGTTGAATGTTAACAATAACTTAATAAT
*****************************************......(((..(((((..((.((((((...(((((((((...(((....)))..)))))))))...)))))).))..)))))..)))....****************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 01/18/2014 at 01:41 PM