ID:

der_112

 Coordinate:

scaffold_4690:9687401-9687461 +

 Confidence:

novel

 Type:

intergenic

 [View on UCSC Genome Browser]
Legend: mature star mismatch in read

Predicted structure

-35.4 -35.1 -35.1

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

GCGGGTCGAACTGGGCCTTTGGGCGCTCCTTTCCTGGCTGTGAGTGGGTGCGTGCGTTTATGTCAGCGCAATGCTTTTGTTTGGCGGCATGCGGATGGCATACACGTCCACATCCGCACACACATCCGCATCCGTATCAGCGACCCCTGACCCCTGCCAGC
***********************************...((((.(((((((...((((.(((((((.((((.((((..........))))))))..))))))).))))...))))))).))))....*********************************** 		Read size # Mismatch Hit Count Total Norm Total V107
male body
malebody
........................................................................................ATGCGGATGGCATACACGTCCA................................................... 22 0 1 464.00 464 464
........................................................................................ATGCGGATGGCATACACGTCC.................................................... 21 0 1 142.00 142 142
........................................................................................ATGCGGATGGCATACACGTCCACA................................................. 24 0 1 94.00 94 94
........................................................................................ATGCGGATGGCATACACGTCCAC.................................................. 23 0 1 85.00 85 85
........................................................................................ATGCGGATGGCATACACGTC..................................................... 20 0 1 40.00 40 40
.......................................................................................CATGCGGATGGCATACACGTCCA................................................... 23 0 1 26.00 26 26
.......................................................................................CATGCGGATGGCATACACGTC..................................................... 21 0 1 11.00 11 11
.......................................................................................CATGCGGATGGCATACACGTCCAC.................................................. 24 0 1 4.00 4 4
........................................................................................ATGCGGATGGCATACACGTCCACT................................................. 24 1 1 3.00 3 3
.......................................................................................CATGCGGATGGCATACACG....................................................... 19 0 1 2.00 2 2
.......................................................................................CATGCGGATGGCATACACGTCT.................................................... 22 1 1 2.00 2 2
.........................................................................................TGCGGATGGCATACACGTCCACA................................................. 23 0 1 2.00 2 2
........................................................................................AGGCGGATGGCATACACGTCC.................................................... 21 1 1 2.00 2 2
........................................................................................ATGCAGATGGCATACACGTCCA................................................... 22 1 1 2.00 2 2
........................................................................................ATGCGGATGTCATACACGTCCA................................................... 22 1 1 2.00 2 2
........................................................................................ATGCGGATGGCATACATGTTCA................................................... 22 2 1 1.00 1 1
........................................................................................ATTCGGATGGCATACACGTCCACA................................................. 24 1 1 1.00 1 1
........................................................................................ATGCGGATGGCATACACGTCCATT................................................. 24 2 1 1.00 1 1
........................................................................................ATGCGGATGGCATACATGTCCACA................................................. 24 1 1 1.00 1 1
........................................................................................ATGCGGATGGTATACACGTCCACA................................................. 24 1 1 1.00 1 1
........................................................................................ATGCGGATGGCATACACCTCCA................................................... 22 1 1 1.00 1 1
...................................................GTGCGTTTATGTCAGCGCT........................................................................................... 19 1 1 1.00 1 1
.......................................................................................CATGCGGATGGCATACACGTCC.................................................... 22 0 1 1.00 1 1
.......................................................................................CATGCGGATGGCATACACGT...................................................... 20 0 1 1.00 1 1
........................................................................................ATTCGGATGGCATACACGTCCAC.................................................. 23 1 1 1.00 1 1
........................................................................................ATGCGGATAGCATACACGTCCA................................................... 22 1 1 1.00 1 1
........................................................................................AGGCGGATGGCATACACGTCCA................................................... 22 1 1 1.00 1 1
.......................................................................................CATGCGGATTGCATACACGTCCA................................................... 23 1 1 1.00 1 1
........................................................................................ATGCGGATGGAATACACGTCCA................................................... 22 1 1 1.00 1 1
........................................................................................ATTCGGATGGCATACACGTCC.................................................... 21 1 1 1.00 1 1
........................................................................................ATGCGGATGGCATACACTTCC.................................................... 21 1 1 1.00 1 1
........................................................................................ATCCGGATGGCATACACGTCCA................................................... 22 1 1 1.00 1 1
.......................................................................................CATGCGGATGGCATACACGTCCAA.................................................. 24 1 1 1.00 1 1
........................................................................................ATGCGGATGGCATACACGCCCA................................................... 22 1 1 1.00 1 1
........................................................................................ATGCGGATGTCATACACGTCCAC.................................................. 23 1 1 1.00 1 1
........................................................................................ATGCGGATGGCATACACGTCCAT.................................................. 23 1 1 1.00 1 1
........................................................................................ATGCGGACGGCATACACGTCCA................................................... 22 1 1 1.00 1 1
........................................................................................AGGCGGATGGCATACACGTC..................................................... 20 1 1 1.00 1 1
........................................................................................ATGCGGATTGCATACACGTCCACA................................................. 24 1 1 1.00 1 1
........................................................................................ATGCGGATGGCATACACGTCCAA.................................................. 23 1 1 1.00 1 1
........................................................................................ATGCGGATGGCATACACTTCCA................................................... 22 1 1 1.00 1 1
........................................................................................ATGCGGATGGCAAACACGTCCA................................................... 22 1 1 1.00 1 1
........................................................................................GTGCGGATGGCATACACGTCCA................................................... 22 1 1 1.00 1 1
........................................................................................ATGCGGATGGCATACAGGTCCA................................................... 22 1 1 1.00 1 1
........................................................................................ATGCTGATGACATACACGTCCACA................................................. 24 2 1 1.00 1 1
........................................................................................ATTCGGATGGCATACACGTCCA................................................... 22 1 1 1.00 1 1
........................................................................................ATGCGGATGGCATACACGTCGAC.................................................. 23 1 1 1.00 1 1
........................................................................................ATGCGGATAGCATACACGTCC.................................................... 21 1 1 1.00 1 1
...........................................................................TTTGTTTGGCGGCATGCGGATGG............................................................... 23 0 1 1.00 1 1
.......................................................................................CATGCGGATGGCATACACGCCCA................................................... 23 1 1 1.00 1 1
..........................................................................................GCGGATGGCATACACGTCCAC.................................................. 21 0 1 1.00 1 1
........................................................................................ATGCGGATGGCATACGCGTCCA................................................... 22 1 1 1.00 1 1
........................................................................................ATGCGGATGGCATACACGTCTA................................................... 22 1 1 1.00 1 1

Anti-sense strand reads

GCTGGCAGGGGTCAGGGGTCGCTGATACGGATGCGGATGTGTGTGCGGATGTGGACGTGTATGCCATCCGCATGCCGCCAAACAAAAGCATTGCGCTGACATAAACGCACGCACCCACTCACAGCCAGGAAAGGAGCGCCCAAAGGCCCAGTTCGACCCGC
***********************************....((((.(((((((...((((.(((((((..((((((((..........)))).)))).))))))).))))...))))))).))))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 01/18/2014 at 01:39 PM