ID:

der-mir-312-2

 Coordinate:

scaffold_4845:10616702-10616770 -

 Confidence:

Known

 Type:

Unknown

 [View on miRBase]
[View on UCSC Genome Browser]
Legend: mature star mismatch in read

Predicted structure

-26.1 -25.9 -25.9

Flybase annnotation

pre_miRNA [Dere\mir-312-2-RM]; miRNA [Dere\miR-312-2-RA]

No Repeatable elements found

Sense Strand Reads

TTAAAAATTACCATATTTATATAATTGATTATGTGAATTAAGTTTGAAGCGCTTCGGTTCGTACCAGGAGCAATTCTGCATTTTTTTTAAGCTAGTATTGCACTTGAGACGGCCGGATTACTTTTAAACAAAACATTTTAAATAAAAACTAATACTGTTATAGGCGGTA
***************************************..((((((((...((((((.(((..((((.(((((.((((...........)).)).))))).))))..)))))))))....))))))))...************************************* 		Read size # Mismatch Hit Count Total Norm Total V107
male body
malebody
...............................................................................................TATTGCACTTGAGACGGCCGGA.................................................... 22 0 2 332.00 664 664
...............................................................................................TATTGCACTTGAGACGGCCGG..................................................... 21 0 2 147.00 294 294
...............................................................................................TATTGCACTTGAGACGGCCG...................................................... 20 0 2 108.00 216 216
...............................................................................................TATTGCACTTGAGACGGCCGGAT................................................... 23 0 2 59.00 118 118
...............................................................................................TATTGCACTTGAGACGGCCGGT.................................................... 22 1 2 59.00 118 118
...............................................................................................TATTGCACTTGAGACGGCCGGTT................................................... 23 1 2 29.50 59 59
...............................................................................................TATTGCACTTGAGACGGCCGT..................................................... 21 1 2 21.00 42 42
...............................................................................................TATTGCACTTGAGACGGCCGGAA................................................... 23 1 2 16.50 33 33
...............................................................................................TATTGCACTTGAGACGGCCGTTT................................................... 23 2 2 15.50 31 31
...............................................................................................TATTGCACTTGAGACGGCCGGTTT.................................................. 24 1 2 11.00 22 22
...............................................................................................TATTGCACTTGAGACGGCCT...................................................... 20 1 2 10.00 20 20
...............................................................................................TATTGCACTTGAGACGGCCGGATT.................................................. 24 0 2 9.50 19 19
...............................................................................................TATTGCACTTGAGACGGCCGTT.................................................... 22 2 2 9.50 19 19
...............................................................................................TATTGCACTTGAGACGGCC....................................................... 19 0 2 9.50 19 19
................................................................................................ATTGCACTTGAGACGGCCGGA.................................................... 21 0 2 6.50 13 13
................................................................................................ATTGCACTTGAGACGGCCGGAT................................................... 22 0 2 6.00 12 12
...............................................................................................TATTGCACTTGAGACGGCCGGTAT.................................................. 24 2 2 5.50 11 11
...............................................................................................TATTGCACTTGAGACGGCCGGTA................................................... 23 2 2 5.00 10 10
...............................................................................................TATTGCACTTGAGACGGCCGGAAT.................................................. 24 1 2 4.50 9 9
................................................................................................ATTGCACTTGAGACGGCCGG..................................................... 20 0 2 4.00 8 8
...............................................................................................TATTGCACTTGAGACGGCCGTA.................................................... 22 1 2 3.00 6 6
...............................................................................................TATTGCACTTGAGACGGCCGGTTTT................................................. 25 2 2 2.50 5 5
...............................................................................................TATTGCACTTGAGACGGCCGGAC................................................... 23 1 2 2.50 5 5
...............................................................................................TATTGCACTTGAGACGGCCGGTTAT................................................. 25 3 2 2.50 5 5
...............................................................................................TATTGCACTTGAGACGGCCGGATTT................................................. 25 1 2 2.50 5 5
......................................................CGGTTCGTACCAGGAGCAATTCT............................................................................................ 23 0 2 2.00 4 4
...............................................................................................TATTGCACTTGAGACGGCCGGTTA.................................................. 24 2 2 2.00 4 4
...............................................................................................TATTGCACTTGAGACGGCCA...................................................... 20 1 2 2.00 4 4
...............................................................................................TATTGCACTTGAGACGGCCGGAAA.................................................. 24 2 2 2.00 4 4
...............................................................................................TATTGCACTTGAGACGGCCGTAT................................................... 23 1 2 2.00 4 4
................................................................................................ATTGCACTTGAGACGGCCGGT.................................................... 21 1 2 1.50 3 3
...............................................................................................TATCGCACTTGAGACGGCCGGA.................................................... 22 1 2 1.50 3 3
...............................................................................................TATTGCACTTGAGACGGCCGGTAA.................................................. 24 3 2 1.50 3 3
...............................................................................................TATTGCACTTGAGACGGCCGTTAT.................................................. 24 3 2 1.50 3 3
...............................................................................................TATTGCACTTGAGACGGCCGGATA.................................................. 24 1 2 1.50 3 3
...............................................................................................TATTGCACTTGAGACGGCCTGAT................................................... 23 1 2 1.50 3 3
...............................................................................................TATTGCACTTGAGACGGCCGGATTTT................................................ 26 2 2 1.50 3 3
...............................................................................................TATTGCACTTGAGACGTCCGGA.................................................... 22 1 2 1.00 2 2
...............................................................................................TATTGCACTTGAGACGGCCGTAA................................................... 23 2 2 1.00 2 2
...............................................................................................TATTGCACTTGAGACGGCCGGATTAT................................................ 26 1 2 1.00 2 2
................................................................................................ATTGCACTTGAGACGGCCG...................................................... 19 0 2 1.00 2 2
...............................................................................................TGTTGCACTTGAGACGGCCG...................................................... 20 1 2 1.00 2 2
...............................................................................................TAGTGCACTTGAGACGGCCGGA.................................................... 22 1 2 1.00 2 2
...............................................................................................GATTGCACTTGAGACGGCCGGA.................................................... 22 1 2 1.00 2 2
...............................................................................................TATTCCACTTGAGACGGCCGGA.................................................... 22 1 2 1.00 2 2
...............................................................................................TATTGCACTTGAGACGGTT....................................................... 19 2 4 0.50 2 2
...............................................................................................TATTGCACTTGAGACGGCCGGTATAT................................................ 26 3 2 0.50 1 1
................................................................................................ATTGCACTTGAGATGGCCGGT.................................................... 21 2 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGACCG...................................................... 20 1 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGGATAT................................................. 25 2 2 0.50 1 1
.................................................................................................TTGCACTTGAGACGGCCGGA.................................................... 20 0 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGGC.................................................... 22 1 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCTA..................................................... 21 2 2 0.50 1 1
...............................................................................................TATTGCACTTGATACGGCCGGA.................................................... 22 1 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGGTTTAT................................................ 26 2 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGGAAC.................................................. 24 2 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCT....................................................... 19 1 2 0.50 1 1
...............................................................................................TGTTGCACTTGAGACGGCCGGT.................................................... 22 2 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGGAGT.................................................. 24 1 2 0.50 1 1
...............................................................................................CATTGCACTTGAGACGGCCGGA.................................................... 22 1 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGGAATT................................................. 25 2 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGGTTG.................................................. 24 2 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGGATTTTAT.............................................. 28 3 2 0.50 1 1
...............................................................................................TATTGCACTTGAGGCGGCCGGAT................................................... 23 1 2 0.50 1 1
...............................................................................................TATTCCACTTGAGACGGCCGG..................................................... 21 1 2 0.50 1 1
................................................................................................ATTGCACTTGAGACGGCCGGTAT.................................................. 23 2 2 0.50 1 1
...............................................................................................TATTACACTTGAGACGGCCG...................................................... 20 1 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGCATAT................................................. 25 3 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGTG.................................................... 22 2 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGACGGAA................................................... 23 2 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGGAATG................................................. 25 2 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACCGCCG...................................................... 20 1 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGGTATG................................................. 25 3 2 0.50 1 1
...............................................................................................TATTGCACTTGGGACGGCCGG..................................................... 21 1 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGGATTTAT............................................... 27 2 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGGATTTTT............................................... 27 2 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGGTTTATA............................................... 27 3 2 0.50 1 1
...............................................................................................TATAGCACTTGAGACGGCCGGA.................................................... 22 1 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGGATG.................................................. 24 1 2 0.50 1 1
...............................................................................................TATTGCACCTGAGCCGGCCGGAAT.................................................. 24 3 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGATTT.................................................. 24 2 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGGTTAAA................................................ 26 3 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCAGAA................................................... 23 2 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGGAAAA................................................. 25 2 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACTGCCGGAT................................................... 23 1 2 0.50 1 1
...............................................................................................TTTTGCACTTGAGACGGCCGG..................................................... 21 1 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGGTTAAT................................................ 26 3 2 0.50 1 1
................................................................................................ATTGCACTTGAGACGGCCGGATT.................................................. 23 0 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACACCCGG..................................................... 21 2 2 0.50 1 1
................................................................................................ATTGCACTTGAGACGGCCGGAA................................................... 22 1 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGT........................................................ 18 1 2 0.50 1 1
...............................................................................................TATTGTACTTGAGACGGCCG...................................................... 20 1 2 0.50 1 1
...............................................................................................TCTTGCACTTGAGACGGCCGGATAT................................................. 25 3 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGGTTTAAT............................................... 27 2 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGGCTT.................................................. 24 1 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCAGAT................................................... 23 1 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGGTGT.................................................. 24 2 2 0.50 1 1
...............................................................................................TATTTCACTTGAGACGGCCG...................................................... 20 1 2 0.50 1 1
...............................................................................................TATTGCACTCGAGACGGCCGGA.................................................... 22 1 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGTGAT.................................................. 24 3 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCAGGA.................................................... 22 1 2 0.50 1 1
................................................................................................ATTGCACTTGAGACGGCCGGTTAA................................................. 24 2 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGTTA................................................... 23 3 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGGTTTA................................................. 25 1 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGGATATT................................................ 26 3 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGAT.................................................... 22 2 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGGTATT................................................. 25 3 2 0.50 1 1
................................................................................................ATTGCACTTGAGACGTCCGGTAT.................................................. 23 3 2 0.50 1 1
...............................................................................................TATTGCACTTGATACGGCCG...................................................... 20 1 2 0.50 1 1
................................................................................................ATTGCACTTGAGACGGCCGGAC................................................... 22 1 2 0.50 1 1
...............................................................................................TATTGAACTTGAGACGGCCG...................................................... 20 1 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGTTG................................................... 23 3 2 0.50 1 1
................................................................................................TATGCACTTGAGACGGCCG...................................................... 19 2 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGCCCGGA.................................................... 22 1 2 0.50 1 1
...............................................................................................TATTTCACTTGAGACGGCCGGA.................................................... 22 1 2 0.50 1 1
................................................................................................ATTGCACTTGAGACGGCCGGAGT.................................................. 23 1 2 0.50 1 1
...............................................................................................TATTGCACTTGAAACGGCCGGT.................................................... 22 2 2 0.50 1 1
.................................................................................................TTGCACTTGAGACGGCCGGTT................................................... 21 1 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACTGCCGGTT................................................... 23 2 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCAGGT.................................................... 22 2 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGATT................................................... 23 2 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACCGCCGG..................................................... 21 1 2 0.50 1 1
................................................................................................ATTGCACTTGAGACGGCCGGAAA.................................................. 23 2 2 0.50 1 1
...............................................................................................TATTGCACTTGAGATGGCCGGA.................................................... 22 1 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGGTTTAA................................................ 26 2 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACAGCCGGA.................................................... 22 1 2 0.50 1 1
...............................................................................................GATTGCACTTGAGACGGCCGG..................................................... 21 1 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACTGCCGG..................................................... 21 1 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGGTTTTG................................................ 26 3 2 0.50 1 1
...............................................................................................TATTGCACTTGCGACGGCCGGA.................................................... 22 1 2 0.50 1 1
...............................................................................................TATTACACTTGAGACGGCCGGTT................................................... 23 2 2 0.50 1 1
................................................................................................ATTGCACTTGAGACGTCCGGA.................................................... 21 1 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGTTTT.................................................. 24 2 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACAGCCGG..................................................... 21 1 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGGTTTG................................................. 25 2 2 0.50 1 1
...............................................................................................TATTGCACTTGAGCCGGCCGGTTT.................................................. 24 2 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCTG..................................................... 21 1 2 0.50 1 1
...............................................................................................TGTTGCACTTGAGACGGCCGGA.................................................... 22 1 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGGG.................................................... 22 1 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCTGA.................................................... 22 1 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGTGA................................................... 23 3 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGCCGGTG................................................... 23 2 2 0.50 1 1
...............................................................................................TATTGCACTTGAGACGGTAT...................................................... 20 3 5 0.40 2 2
...............................................................................................TATTGCACTTGAGCCGCCCGG..................................................... 21 2 3 0.33 1 1
...............................................................................................TATTGCACTTGAGACGGTA....................................................... 19 2 3 0.33 1 1
...............................................................................................TATTGCACTTGAGACTCCGG...................................................... 20 3 8 0.13 1 1
......................................................................................................CTTGAGACGGCCGGAAGAT................................................ 19 3 9 0.11 1 1
...............................................................................................CATTGCACTTGAGACGGTTG...................................................... 20 3 13 0.08 1 1

Anti-sense strand reads

TACCGCCTATAACAGTATTAGTTTTTATTTAAAATGTTTTGTTTAAAAGTAATCCGGCCGTCTCAAGTGCAATACTAGCTTAAAAAAAATGCAGAATTGCTCCTGGTACGAACCGAAGCGCTTCAAACTTAATTCACATAATCAATTATATAAATATGGTAATTTTTAA
*************************************...((((((((....(((((((((..((((.(((((.((.((...........)))).))))).))))..))).))))))...))))))))..*************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 01/18/2014 at 01:55 PM