ID:

ssc_12

 Coordinate:

chrX:136188522-136188600 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-42.4 -41.9
mature

star

  1. ssc_9  chrX:136186287-136186309 -
  2. ssc_12  chrX:136188534-136188556 -

Sense Strand Reads

GTGTGAGTGTGTGGGGAACACAGGGCAGGTCCTCCACCTTGAAGCCGTGCTGTGTGTGGTGCCCTATCCAGGCAGGTGCTGTTCTCTTTACTAGTGAACGGCGCCTGTGTGGTTAGAGTAAGGCTCACAAGAACATCGACTCTGGTGGCCTCGGGACCAGTGATGTGGGCGGAGCCGCA

*************************************************.((((.((..(((.(((.(((.(((((((((((((.((.....)).))))))))))))).))).))).)))..)).))))...*********************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR139075

testes		 SRR1274764

testes		 SRR139076

testes		 SRR066810

testes		 SRR066809

ovary		 SRR1274763

ovary
................................................................TATCCAGGCAGGTGCTGTTCTCT............................................................................................ 23 0 1 1081.00 1081 163 605 97 215 0 1
................................................................TATCCAGGCAGGTGCTGTTCT.............................................................................................. 21 0 1 574.00 574 187 89 192 105 1 0
..............................................................................................TGAACGGCGCCTGTGTGGTTAGA.............................................................. 23 0 2 472.00 944 220 45 302 376 1 0
..............................................................................................TGAACGGCGCCTGTGTGGTTAG............................................................... 22 0 2 453.00 906 267 10 324 301 4 0
................................................................TATCCAGGCAGGTGCTGTTCTC............................................................................................. 22 0 1 433.00 433 84 247 45 55 0 2
..............................................................................................TGAACGGCGCCTGTGTGGTTA................................................................ 21 0 2 142.00 284 78 6 131 69 0 0
................................................................................................AACGGCGCCTGTGTGGTTAGA.............................................................. 21 0 2 123.50 247 126 3 101 17 0 0
................................................................TATCCAGGCAGGTGCTGTTC............................................................................................... 20 0 1 101.00 101 35 7 26 33 0 0
................................................................TATCCAGGCAGGTGCTGTTCTCA............................................................................................ 23 1 1 67.00 67 18 9 8 32 0 0
..............................................................................................TGAACGGCGCCTGTGTGGTT................................................................. 20 0 2 60.00 120 31 3 27 58 1 0
..............................................................................................TGAACGGCGCCTGTGTGGTTAGT.............................................................. 23 1 2 55.00 110 20 14 15 61 0 0
................................................................TATCCAGGCAGGTGCTGTTCA.............................................................................................. 21 1 1 32.00 32 10 1 9 12 0 0
................................................................................................AACGGCGCCTGTGTGGTTAG............................................................... 20 0 2 30.00 60 27 0 30 3 0 0
...............................................................................................GAACGGCGCCTGTGTGGTTAGA.............................................................. 22 0 2 29.50 59 35 0 16 8 0 0
..............................................................................................TGAACGGCGCCTGTGTGGTTAA............................................................... 22 1 2 28.00 56 20 1 27 8 0 0
................................................................TATCCAGGCAGGTGCTGTT................................................................................................ 19 0 1 28.00 28 5 18 4 1 0 0
..............................................................................................TGAACGGCGCCTGTGTGGTTAT............................................................... 22 1 2 21.50 43 6 1 34 2 0 0
................................................................................................AACGGCGCCTGTGTGGTTAGT.............................................................. 21 1 2 17.00 34 18 1 13 2 0 0
...............................................................................................GAACGGCGCCTGTGTGGTTAG............................................................... 21 0 2 14.50 29 19 0 9 1 0 0
..............................................................................................TGAACGGCGCCTGTGTGGTTAGAA............................................................. 24 1 2 14.50 29 12 1 13 3 0 0
................................................................TATCCAGGCAGGTGCTGTTCTCTT........................................................................................... 24 0 1 12.00 12 1 2 3 6 0 0
..............................................................................................TGAACGGCGCCTGTGTGGTTAGAT............................................................. 24 1 2 11.00 22 8 1 7 6 0 0
..............................................................................................TGAACGGCGCCTGTGTGGTTT................................................................ 21 1 2 10.00 20 5 0 9 6 0 0
................................................................................................AACGGCGCCTGTGTGGTTAGAA............................................................. 22 1 2 10.00 20 12 0 7 1 0 0
.................................................................ATCCAGGCAGGTGCTGTTCTCT............................................................................................ 22 0 1 8.00 8 1 3 2 2 0 0
................................................................TATCCAGGCAGGTGCTGTTCTA............................................................................................. 22 1 1 7.00 7 1 2 1 3 0 0
................................................................TATCCAGGCAGGTGCTGTTCTCTA........................................................................................... 24 1 1 7.00 7 0 1 0 6 0 0
................................................................TATCCAGGCAGGTGCTGTTCTT............................................................................................. 22 1 1 7.00 7 5 0 1 1 0 0
................................................................................................AACGGCGCCTGTGTGGTTA................................................................ 19 0 2 6.00 12 9 0 3 0 0 0
...............................................................................................GAACGGCGCCTGTGTGGTTA................................................................ 20 0 2 5.50 11 8 0 3 0 0 0
..............................................................................................TGAACGGCGCCTGTGTGGTTAGAAT............................................................ 25 1 1 5.00 5 0 2 2 1 0 0
..............................................................................................TGAACGGCGCCTGTGTGGT.................................................................. 19 0 2 4.50 9 5 3 0 1 0 0
................................................................TATCCAGGCAGGCGCTGTTCTCT............................................................................................ 23 1 1 4.00 4 2 1 0 1 0 0
..............................................................................................TGAACGGCGCCTGTGTGGTTTT............................................................... 22 2 2 4.00 8 5 0 2 1 0 0
................................................................TATCCAGGCAGGGGCTGTTCT.............................................................................................. 21 1 1 4.00 4 2 0 2 0 0 0
................................................................TATCCAGGCAGGTGCTGTTCTCTTT.......................................................................................... 25 0 1 4.00 4 0 2 1 1 0 0
................................................................TATCCAGGCAGGTGCTGTTCTCTAA.......................................................................................... 25 2 1 4.00 4 0 3 0 1 0 0
................................................................................................AACGGCGCCTGTGTGGTTAGAT............................................................. 22 1 2 4.00 8 5 0 3 0 0 0
................................................................TATCCAGGCAGGTGCTGTTCTCAA........................................................................................... 24 2 1 4.00 4 0 0 3 1 0 0
................................................................TATCCAGGCAGGTGCTGTTCTTT............................................................................................ 23 1 1 4.00 4 4 0 0 0 0 0
................................................................TATCCAGGCAGGTGCTGTTCTCAT........................................................................................... 24 1 1 4.00 4 0 0 2 2 0 0
................................................................TATCCAGGCAGGTGCTGT................................................................................................. 18 0 1 4.00 4 3 1 0 0 0 0
................................................................TATCCAGGCAGGTGCTGTTA............................................................................................... 20 1 3 3.33 10 2 1 4 3 0 0
....................................................................CAGGCAGGTGCTGTTCTCT............................................................................................ 19 0 2 3.00 6 0 3 1 2 0 0
................................................................TATCCAGGTAGGTGCTGTTCTCT............................................................................................ 23 1 1 3.00 3 0 3 0 0 0 0
................................................................TATCCAGGCAGGGGCTGTTCTCT............................................................................................ 23 1 1 3.00 3 1 0 1 1 0 0
................................................................TATCCAGGCAGGTGCTGCTCTC............................................................................................. 22 1 1 3.00 3 3 0 0 0 0 0
................................................................TATCCAGGCAGGTGCTGTTT............................................................................................... 20 1 1 3.00 3 0 0 3 0 0 0
................................................................TATCCAGGCAGGCGCTGTTCTC............................................................................................. 22 1 1 3.00 3 2 0 1 0 0 0
................................................................TATCCAGGCAGGGGCTGTTC............................................................................................... 20 1 1 3.00 3 1 0 1 1 0 0
..............................................................................................TGAACGGCGTCTGTGTGGTTAGA.............................................................. 23 1 2 3.00 6 3 0 3 0 0 0
................................................................TATCCAGGCAGGTGCTGTTCTAT............................................................................................ 23 1 1 3.00 3 0 0 2 1 0 0
................................................................TATCCAGGCAGGGGCTGTTCTC............................................................................................. 22 1 1 3.00 3 2 0 1 0 0 0
...............................................................................................GAACGGCGCCTGTGTGGTT................................................................. 19 0 2 2.50 5 4 0 1 0 0 0
................................................................................................AACGGCGCCTGTGTGGTTAT............................................................... 20 1 2 2.50 5 2 0 3 0 0 0
................................................................TATCCAGGCAGGTGCTGTTCTAA............................................................................................ 23 2 2 2.50 5 0 1 4 0 0 0
............................................CCGTGCTGTGTGTGGTGCCC................................................................................................................... 20 0 2 2.50 5 1 3 0 1 0 0
................................................................TATCCAGGCAGGTGCTGTTCAA............................................................................................. 22 2 1 2.00 2 0 2 0 0 0 0
................................................................TATCCGGGCAGGTGCTGTTCTCT............................................................................................ 23 1 1 2.00 2 1 1 0 0 0 0
................................................................TATCCAGGCAGGTGCTGGTCTC............................................................................................. 22 1 1 2.00 2 1 0 1 0 0 0
................................................................TATCCAGGCAGGTGCTGTTCTCTTTACT....................................................................................... 28 0 1 2.00 2 0 2 0 0 0 0
............................................................................................AGTGAACGGCGCCTGTGTGGTTAT............................................................... 24 1 1 2.00 2 0 0 2 0 0 0
................................................................TATCCAGGCAGGTGCTGTTTT.............................................................................................. 21 1 1 2.00 2 0 0 2 0 0 0
..............................................................................................TGAACGGCGCCTGTGTGG................................................................... 18 0 2 2.00 4 3 0 1 0 0 0
................................................................TATCCAGGCAGGTGCTGTTCCCT............................................................................................ 23 1 1 2.00 2 1 1 0 0 0 0
...............................................................................................GAACGGCGCCTGTGTGGTTAGAA............................................................. 23 1 2 2.00 4 3 0 1 0 0 0
................................................................TATTCAGGCAGGTGCTGTTCTCT............................................................................................ 23 1 1 2.00 2 1 0 1 0 0 0
................................................................TATCCAGGCAGGTGCTGTTCTCG............................................................................................ 23 1 1 2.00 2 0 2 0 0 0 0
................................................................TATCCAGGCAGGAGCTGTTCTC............................................................................................. 22 1 1 2.00 2 0 0 2 0 0 0
..............................................................................................TGAACGGCGCCTGCGTGGTTAG............................................................... 22 1 2 2.00 4 1 0 2 1 0 0
................................................................TATCCAGGCAGGTGCTGTTTTCT............................................................................................ 23 1 1 2.00 2 1 0 1 0 0 0
..............................................................................................TGAACGGCGTCTGTGTGGTTAG............................................................... 22 1 2 2.00 4 1 0 3 0 0 0
................................................................TATCCAGGCAGGTGCTGTTCTCTGT.......................................................................................... 25 1 1 2.00 2 0 2 0 0 0 0
.............................................CGTGCTGTGTGTGGTGCCC................................................................................................................... 19 0 2 2.00 4 1 3 0 0 0 0
..............................................................................................TGAACGGCGCCCGTGTGGTTAG............................................................... 22 1 2 1.50 3 2 0 1 0 0 0
................................................................TGACCAGGCAGGTGCTGTTCTCTTT.......................................................................................... 25 2 2 1.50 3 1 1 0 1 0 0
................................................................................................AACGGCGCCTGTGTGGTTAA............................................................... 20 1 2 1.50 3 2 0 1 0 0 0
..............................................................................................TGAACGGCGCCTGTGTGGTTATA.............................................................. 23 1 2 1.50 3 0 0 2 1 0 0
..............................................................................................TGAACGGCGCCTGTGTGGTTCGA.............................................................. 23 1 2 1.50 3 1 0 2 0 0 0
...............................................................................................GAACGGCGTCTGTGTGGTTAG............................................................... 21 1 2 1.50 3 3 0 0 0 0 0
..............................................................................................TGAACGGCGCCTGTGTGGTTTA............................................................... 22 2 2 1.50 3 0 0 3 0 0 0
...............................................................................................GAACGGCGCCTGTGTGGTTAGT.............................................................. 22 1 2 1.50 3 2 0 1 0 0 0
..............................................................................................TGAACGGCGCCTGTGTGGTTAGAAA............................................................ 25 2 2 1.50 3 1 0 1 1 0 0
................................................................................................AACGGCGCCTGTGTGGTTAGTT............................................................. 22 2 2 1.50 3 3 0 0 0 0 0
..............................................................................................TGAGCGGCGCCTGTGTGGTTAGA.............................................................. 23 1 2 1.50 3 0 0 2 1 0 0
..............................................................................................TGAACGGCGCCTGTGTGGCTAGA.............................................................. 23 1 3 1.33 4 0 0 2 2 0 0
................................................................................................AACGGCGCCTGTGTGGTTAGAAA............................................................ 23 2 3 1.33 4 1 0 3 0 0 0
..............................................................................................AGAACGGCGCCTGTGTGGTTAGA.............................................................. 23 1 2 1.00 2 0 0 2 0 0 0
................................................................TATCCAGGCAGGTGCTGTTCTCTAT.......................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0
................................................................TATCCAGGCACGTGCTGTTCTCT............................................................................................ 23 1 1 1.00 1 0 0 0 1 0 0
................................................................TATCCAGGCCGGTGCTGTTCTCT............................................................................................ 23 1 1 1.00 1 0 0 1 0 0 0
..............................................................................................TCAACGGCGCCTGTGTGGTTAG............................................................... 22 1 2 1.00 2 1 0 1 0 0 0
..............................................................................................TGAACGGCGCCTGTGTGGGTAG............................................................... 22 1 2 1.00 2 0 0 2 0 0 0
................................................................TATCCAGGCAGGTGCTGTTTTC............................................................................................. 22 1 1 1.00 1 0 0 1 0 0 0
................................................................TATCCAGGCAGGTGCTGTTCATT............................................................................................ 23 2 1 1.00 1 0 0 0 1 0 0
................................................................TATCCAGGCAGGTGCTGTTCTTTA........................................................................................... 24 2 1 1.00 1 0 0 1 0 0 0
................................................................TATCCAGGCAGGCGCTGTTC............................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
................................................................TATCCAGGCAGGTGCTGTTCTCTG........................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0
................................................................TATCCAGGCCGGTGCTGTTCT.............................................................................................. 21 1 2 1.00 2 2 0 0 0 0 0
..............................................................................................TGAACGGCGCCTGTGTGGTTAGTA............................................................. 24 2 2 1.00 2 0 0 0 2 0 0
................................................................................................AACGGCGGCTGTGTGGTTAGA.............................................................. 21 1 2 1.00 2 2 0 0 0 0 0
...................................................................................................GGCGCCTGTGTGGTTAGTAT............................................................ 20 2 1 1.00 1 0 0 1 0 0 0
................................................................TATCCAGGCAGGTGCTGCTCT.............................................................................................. 21 1 1 1.00 1 0 0 1 0 0 0
..............................................................................................TGAACGGCGTCTGTGTGGTT................................................................. 20 1 2 1.00 2 1 0 1 0 0 0
................................................................TATCCAGGTAGGTGCTGTTCTT............................................................................................. 22 2 1 1.00 1 0 0 1 0 0 0
...................................................................................................GGCGCCTGTGTGGTTAGA.............................................................. 18 0 2 1.00 2 0 0 2 0 0 0
................................................................TATCCAGGCAGGTGCTGGTCTCA............................................................................................ 23 2 1 1.00 1 1 0 0 0 0 0
................................................................TATCCAGGTAGGTGCTATTCT.............................................................................................. 21 2 1 1.00 1 1 0 0 0 0 0
................................................................TATCCAGGCAGGTGCTGTTCG.............................................................................................. 21 1 1 1.00 1 0 0 1 0 0 0
................................................................TACCCAGGCAGGTGCTGTTCTC............................................................................................. 22 1 1 1.00 1 0 0 1 0 0 0
................................................................TATCCAGGCAGGTGCTGTTCTCC............................................................................................ 23 1 1 1.00 1 0 0 1 0 0 0
................................................................TATCCAGACAGGTGCTGTTCTCTAT.......................................................................................... 25 2 2 1.00 2 0 0 0 2 0 0
................................................................TATCCAGGCAGGTGGTGTTCT.............................................................................................. 21 1 1 1.00 1 0 0 1 0 0 0
...............................................................................................GAACGGCGCCTGTGTGGTTAGAT............................................................. 23 1 2 1.00 2 0 0 2 0 0 0
.................................................................ATCCAGGCAGGTGCTGTTCTA............................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
................................................................TATCCAGGCAGGTGCTGTTCTAC............................................................................................ 23 2 1 1.00 1 0 0 0 1 0 0
................................................................TATCCAGGCAGGTGCTGTTCTTCAT.......................................................................................... 25 3 1 1.00 1 0 0 0 1 0 0
................................................................TATCCCGGCAGGTGCTGTTCTCT............................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
................................................................TATCCAGGCAGTTGCTGTTCTCT............................................................................................ 23 1 1 1.00 1 0 0 1 0 0 0
................................................................TATCCAGGCAGCTGCTGTTCTCT............................................................................................ 23 1 1 1.00 1 0 0 1 0 0 0
..............................................................................................TGAACGGCGCCTGTGTGGTTAAAA............................................................. 24 2 2 1.00 2 0 0 2 0 0 0
................................................................TATCCAGGCAGGTGCTGTTCTG............................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGAACGGCGCCTGTGTAGTTAGA.............................................................. 23 1 2 1.00 2 1 0 1 0 0 0
................................................................TATGCAGGCAGGTGCTGTTCTCT............................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
................................................................TATCCAGGCAGGTGCTGTTCTCGA........................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
................................................................................................AACGGCGCCTGTGTGGTTAGAAT............................................................ 23 1 1 1.00 1 0 0 0 1 0 0
................................................................TATCCAGGCAGGTGCTGTCCTCT............................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
................................................................................................AACGGCGCCTGTGTGGTTAGTTT............................................................ 23 2 1 1.00 1 0 0 1 0 0 0
..............................................................................................TGAACGGTGCCTGTGTGGTTAGA.............................................................. 23 1 3 1.00 3 0 0 0 3 0 0
................................................................TATCCAGGCAGGTGATGTTCTCT............................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
................................................................................................AACGGCGCCTGCGTGGTTAGA.............................................................. 21 1 2 1.00 2 0 0 2 0 0 0
................................................................TATCCGGGCAGGTGCTGTTCT.............................................................................................. 21 1 1 1.00 1 0 0 0 1 0 0
......................................................................................TTTACTAGTGAACGGCGCCTGTGTGGTTAGAA............................................................. 32 1 1 1.00 1 0 1 0 0 0 0
..............................................................................................TGAACGGCGCCTGTGTGGTAA................................................................ 21 1 2 1.00 2 1 1 0 0 0 0
................................................................TATCCAGGCAGGTGCTGATCTCT............................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
................................................................TATCCCGGCAGGTGCTGTTCT.............................................................................................. 21 1 1 1.00 1 0 0 1 0 0 0
................................................................TATCCAGGCAGGTGCAGTTCTCT............................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................TGAACGGCGCCTGTGTGGTTAGTAT............................................................ 25 2 1 1.00 1 0 0 1 0 0 0
................................................................TATCCAGGCAGGTACTGTTCTCT............................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
................................................................................................AACGGCGCCTGTGTGGTTCGA.............................................................. 21 1 2 1.00 2 1 0 1 0 0 0
................................................................TATCTAGGCAGGTGCTGTTC............................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
................................................................TATCCAGGCAGGTGCTGGTCT.............................................................................................. 21 1 1 1.00 1 0 0 1 0 0 0
..............................................................................................TGAACGGCGCCTGTGTGGTTAGGATC........................................................... 26 3 1 1.00 1 1 0 0 0 0 0
................................................................TATCCAGGCAGGAGCTGTTCTCT............................................................................................ 23 1 1 1.00 1 0 1 0 0 0 0
................................................................TATCCAGGCAGGTGCTGTTCTCAAA.......................................................................................... 25 3 1 1.00 1 0 0 0 1 0 0
..............................................................................................TAAACGGCGCCTGTGTGGTTAGA.............................................................. 23 1 2 1.00 2 0 0 2 0 0 0
................................................................TATCCAGGTAGGTGCTGTTCT.............................................................................................. 21 1 1 1.00 1 0 0 1 0 0 0
................................................................TATCTAGGCAGGTGCTGTTCT.............................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
................................................................TATCCAGGCAGGAGCTGTTCTA............................................................................................. 22 2 1 1.00 1 0 0 0 1 0 0
................................................................TATCCAGGCAGGTGCTGTTCAAT............................................................................................ 23 2 1 1.00 1 0 0 1 0 0 0
................................................................TACCCAGGCAGGTGCTGTTCTCT............................................................................................ 23 1 1 1.00 1 0 1 0 0 0 0
....................................................................CAGGCAGGTGCTGTTCT.............................................................................................. 17 0 5 0.80 4 2 0 1 1 0 0
................................................................TATCCAGGCAGGTGCTGTCCT.............................................................................................. 21 1 3 0.67 2 2 0 0 0 0 0
......................................................................GGCAGGTGCTGTTCTCT............................................................................................ 17 0 3 0.67 2 0 2 0 0 0 0
................................................................................................AACGGCGCCTGTGTGGTTAGAAAA........................................................... 24 2 3 0.67 2 0 0 2 0 0 0
..............................................................................................TGAACGGCGCCTGCGTGGGTAGAA............................................................. 24 3 2 0.50 1 0 0 1 0 0 0
..............................................................................................TGAACGGCGCCTGGGTGGTTAT............................................................... 22 2 2 0.50 1 0 0 1 0 0 0
..............................................................................................TGAACGGCGCGTGTGTGGTTAG............................................................... 22 1 2 0.50 1 1 0 0 0 0 0
..............................................................................................TGAACGGCGCCAGTGTGGTTAG............................................................... 22 1 2 0.50 1 0 0 1 0 0 0
..............................................................................................TGAACGGCGTCTGTGTGGTTAA............................................................... 22 2 2 0.50 1 1 0 0 0 0 0
................................................................................................AACGGCGCCTGTGTGGGTAG............................................................... 20 1 2 0.50 1 1 0 0 0 0 0
................................................................TAACCAGGCAGGTGCTGTTCTCT............................................................................................ 23 1 2 0.50 1 1 0 0 0 0 0
................................................................................................AACGGCGCCTGTGTGGTT................................................................. 18 0 2 0.50 1 1 0 0 0 0 0
................................................................................................AACGGCGCCTGTGCGGTTAGA.............................................................. 21 1 2 0.50 1 0 0 1 0 0 0
..............................................................................................TGAACGGCGCCTGTGAGGTTAG............................................................... 22 1 2 0.50 1 1 0 0 0 0 0
..............................................................................................TGCACGGCGCCTGTGTGGTTAG............................................................... 22 1 2 0.50 1 1 0 0 0 0 0
...................................................................................................GGCGCCTGTGTGGTTAGT.............................................................. 18 1 2 0.50 1 1 0 0 0 0 0
..............................................................................................TGAACGGCGCCTGTGTGGTTTGT.............................................................. 23 2 2 0.50 1 0 0 1 0 0 0
..............................................................................................TGAACGGCGCCTGCGTGGTTAGA.............................................................. 23 1 2 0.50 1 1 0 0 0 0 0
................................................................................................AACGGCGCCTGTGAGGTTAGA.............................................................. 21 1 2 0.50 1 1 0 0 0 0 0
..............................................................................................AGAACGGCGCCTGTGTGGTTA................................................................ 21 1 2 0.50 1 0 0 1 0 0 0
..............................................................................................TGCACGGCGCCTGTGTGGTTAGT.............................................................. 23 2 2 0.50 1 0 0 0 1 0 0
...............................................................................................GAACGGCGCCTGTGTGGTTAGAG............................................................. 23 0 2 0.50 1 0 0 1 0 0 0
....................................................................................................................CGTAAGGCTCACAAGAACATCA......................................... 22 2 2 0.50 1 0 0 0 1 0 0
..............................................................................................TGAACGGCGTCTGTGTGGTTA................................................................ 21 1 2 0.50 1 0 0 1 0 0 0
..............................................................................................TGAACGGCGCCTGGGTGGTT................................................................. 20 1 2 0.50 1 0 0 1 0 0 0
..............................................................................................TGAACGGCGGCTGTGTGGTTAGT.............................................................. 23 2 2 0.50 1 0 0 1 0 0 0
................................................................................................AACGGCGCCTGGGTGGTTAGA.............................................................. 21 1 2 0.50 1 1 0 0 0 0 0
..............................................................................................AGAACGGCGCCTGTGTGGTTAG............................................................... 22 1 2 0.50 1 1 0 0 0 0 0
..............................................................................................TGCACGGCGCCTGTGTGGTTAGA.............................................................. 23 1 2 0.50 1 0 0 1 0 0 0
..............................................................................................TGAACGGCGCCAGTGTGGTTAGAA............................................................. 24 2 2 0.50 1 1 0 0 0 0 0
................................................................................................AACGGCGCCTGTGGGGTTAGA.............................................................. 21 1 2 0.50 1 0 0 1 0 0 0
..............................................................................................CGAACGGCGCCTGTGTGGTTAGAGA............................................................ 25 2 2 0.50 1 0 0 1 0 0 0
.....................................................................................................................GTAAGGCTCACAAGCACATCGACT...................................... 24 1 2 0.50 1 0 0 1 0 0 0
..............................................................................................TGAACGGCGCCTGTGTGGTTG................................................................ 21 1 2 0.50 1 0 0 0 1 0 0
..............................................................................................TGAACGGCGCCTCTGTGGTTAG............................................................... 22 1 2 0.50 1 0 0 1 0 0 0
...............................................................................................GAACGCCGCCTGTGTGGTTAG............................................................... 21 1 2 0.50 1 0 0 1 0 0 0
..............................................................................................TGAACGGCGCCTGTGTGGTAG................................................................ 21 2 2 0.50 1 0 0 0 1 0 0
..............................................................................................TGAACGGCGCCTGAGTGGTTA................................................................ 21 1 2 0.50 1 1 0 0 0 0 0
..............................................................................................TGAACGGCTCCTGTGTGGTTA................................................................ 21 1 2 0.50 1 0 0 1 0 0 0
................................................................TATCCAGTCAGGTGCTGTTCTCT............................................................................................ 23 1 2 0.50 1 1 0 0 0 0 0
..............................................................................................TGAACGGCGCCTGTGTTGTT................................................................. 20 1 2 0.50 1 0 0 1 0 0 0
................................................................................................AACGGCGCCTGTGTGGTTAGAAG............................................................ 23 2 2 0.50 1 0 0 1 0 0 0
..............................................................................................TGAACGGCGCCTGTGTGATTAG............................................................... 22 1 2 0.50 1 0 0 0 1 0 0
..............................................................................................TAAACGGCGCCTGTGTGGTTAG............................................................... 22 1 2 0.50 1 1 0 0 0 0 0
...................................................................................................GGCGCCTGTGTGGTTA................................................................ 16 0 2 0.50 1 1 0 0 0 0 0
..............................................................................................TGAACGGCGCCTGCGTGGTTA................................................................ 21 1 2 0.50 1 0 0 1 0 0 0
................................................................TCTCCAGGCAGGTGCTGTTCT.............................................................................................. 21 1 2 0.50 1 0 0 1 0 0 0
.................................................................................................ACGGCGCCTGTGTGGTTAGA.............................................................. 20 0 2 0.50 1 0 0 0 1 0 0
.....................................................................AGGCAGGTGCTGTTCTCTT........................................................................................... 19 0 2 0.50 1 1 0 0 0 0 0
................................................................TATCCAGCCAGGTGCTGTTCTC............................................................................................. 22 1 2 0.50 1 1 0 0 0 0 0
...............................................................................................GAACGGCGCCTGTGTTGTTAG............................................................... 21 1 2 0.50 1 0 0 1 0 0 0
..............................................................................................TGAACGGCACCTGTGTGGTTAGA.............................................................. 23 1 2 0.50 1 0 0 0 1 0 0
....................................................................CAGGCAGGTGCTGTTCTC............................................................................................. 18 0 2 0.50 1 1 0 0 0 0 0
..............................................................................................TGAACGGCGCCTGTGTGGTTAGC.............................................................. 23 1 2 0.50 1 1 0 0 0 0 0
..............................................................................................TGAGCGGCGCCTGTGTGGTTAGT.............................................................. 23 2 2 0.50 1 0 0 0 1 0 0
..............................................................................................TGAACGGCGCCTGTGTGGTTGGA.............................................................. 23 1 2 0.50 1 0 0 0 1 0 0
....................................................................................................GCGCCTGTGTGGTTAGA.............................................................. 17 0 2 0.50 1 0 0 0 1 0 0
................................................................TATCCAGGCCGGTGCTGGTCT.............................................................................................. 21 2 2 0.50 1 1 0 0 0 0 0
..............................................................................................TGAACGGCGCCTGTGTGCTTAGA.............................................................. 23 1 2 0.50 1 0 0 1 0 0 0
..............................................................................................TGAACGGCGCCTGTGTGGGTA................................................................ 21 1 2 0.50 1 1 0 0 0 0 0
................................................................................................AACGGCGCCTGTGTGGTCAGA.............................................................. 21 1 2 0.50 1 0 0 0 1 0 0
.....................................................................................................CGCCTGTGTGGTTAGA.............................................................. 16 0 2 0.50 1 0 0 0 1 0 0
................................................................................................AACGGCGCCTGCGTGGTTAGT.............................................................. 21 2 2 0.50 1 1 0 0 0 0 0
...............................................................................................GAACGGCGCTTGTGTGGTTAGA.............................................................. 22 1 2 0.50 1 1 0 0 0 0 0
..............................................................................................TGAACGGCGCCTGTGTGTTTAG............................................................... 22 1 2 0.50 1 1 0 0 0 0 0
..............................................................................................TGAACGTCGCCTGTGTGGTT................................................................. 20 1 2 0.50 1 0 0 1 0 0 0
..............................................................................................TGAACGGCGCCAGTGTGGTT................................................................. 20 1 2 0.50 1 1 0 0 0 0 0
................................................................................................AACGGCGCCTGTGTGGTTATA.............................................................. 21 1 2 0.50 1 0 0 1 0 0 0
..............................................................................................TGAACGGCGCCTGTGTGGTAAA............................................................... 22 2 2 0.50 1 0 0 1 0 0 0
...............................................................................................GCACGGCGCCTGTGTGGTTAGA.............................................................. 22 1 2 0.50 1 1 0 0 0 0 0
.............................................................................................ATGAACGGCGCCTGTGTGGTTAA............................................................... 23 2 2 0.50 1 1 0 0 0 0 0
..............................................................................................TGAACGGCGCCTGTGTGGTAT................................................................ 21 2 2 0.50 1 0 0 0 1 0 0
..............................................................................................CGAACGGCGCCTGTGTGGTTAG............................................................... 22 1 2 0.50 1 0 0 0 1 0 0
................................................................TATCCAGCCAGGTGCTGTTCT.............................................................................................. 21 1 2 0.50 1 0 0 1 0 0 0
................................................................TATCCAGGCAGGTGCT................................................................................................... 16 0 2 0.50 1 1 0 0 0 0 0
..............................................................................................TGACCGGCGCCTGTGTGGTT................................................................. 20 1 2 0.50 1 0 0 1 0 0 0
..............................................................................................AGAACGGCGCCTGTGTGGTTAC............................................................... 22 2 2 0.50 1 0 0 0 1 0 0
................................................................TATCCAGGCAGGGGCTGGTCTCT............................................................................................ 23 2 2 0.50 1 1 0 0 0 0 0
................................................................................................AACGGCGACTGTGTGGTTAGT.............................................................. 21 2 2 0.50 1 1 0 0 0 0 0
................................................................TATCCAGTCAGGTGCTGTTCT.............................................................................................. 21 1 2 0.50 1 1 0 0 0 0 0
..............................................................................................TGAAGGGCGCCTGTGTGGTTAGA.............................................................. 23 1 2 0.50 1 0 0 1 0 0 0
................................................................TATCCAGGCAGGTGCTGTTCTCTAG.......................................................................................... 25 2 2 0.50 1 1 0 0 0 0 0
..............................................................................................TGAACGGCTCCTGTGTGGTTAT............................................................... 22 2 2 0.50 1 0 0 0 1 0 0
..............................................................................................TGAACGGCGCCTGTGTGGTTTTA.............................................................. 23 2 2 0.50 1 0 0 1 0 0 0
...............................................................................................GAACGGCGCCTGTGTGG................................................................... 17 0 2 0.50 1 0 0 1 0 0 0
................................................................................................AACGGCGCCTGTGTGTTTAGA.............................................................. 21 1 2 0.50 1 1 0 0 0 0 0
................................................................................................AACGGCGCCTGTTTGGTTAG............................................................... 20 1 2 0.50 1 1 0 0 0 0 0
..............................................................................................TGAACGGCGCCTGTGTGCTTAG............................................................... 22 1 2 0.50 1 0 0 1 0 0 0
..............................................................................................TGAACGGCGCTTGTGTGGTTAG............................................................... 22 1 2 0.50 1 0 0 1 0 0 0
..............................................................................................TGCACGGCGCCTGTGTGGTTAGAT............................................................. 24 2 2 0.50 1 0 0 1 0 0 0
..............................................................................................TGAACGGCGCCTGTGTGGTTAGAAAAA.......................................................... 27 2 2 0.50 1 0 1 0 0 0 0
..............................................................................................TTAACGGCGCCTGTGTGGTTA................................................................ 21 1 2 0.50 1 0 0 1 0 0 0
..............................................................................................TGAACGGCACCTGTGTGGTTAG............................................................... 22 1 2 0.50 1 1 0 0 0 0 0
...................................................................................................GGCGCCTGTGTGGTTAG............................................................... 17 0 2 0.50 1 1 0 0 0 0 0
..............................................................................................TGAGCGGCGCCTGTGTGGTTAG............................................................... 22 1 2 0.50 1 1 0 0 0 0 0
.....................................................................................................................GTAAGGCTCACAAGAACATCGACT...................................... 24 0 2 0.50 1 0 0 1 0 0 0
..............................................................................................TGAACGGCGCCTGTGTGGTTGTAG............................................................. 24 2 2 0.50 1 0 0 1 0 0 0
..............................................................................................TTTACGGCGCCTGTGTGGTTAGA.............................................................. 23 2 2 0.50 1 0 0 1 0 0 0
..............................................................................................TGCACGGCGCCTGTGAGGTTAGA.............................................................. 23 2 2 0.50 1 0 0 1 0 0 0
..............................................................................................TGAACGTCGCCTGTGTGGTTAGA.............................................................. 23 1 2 0.50 1 0 0 1 0 0 0
................................................................................................AACGGCACCTGTGTGGTTAG............................................................... 20 1 2 0.50 1 0 0 1 0 0 0
..............................................................................................TGAACGGCGCCTGTGTGGTTAGAAGA........................................................... 26 2 2 0.50 1 0 0 0 1 0 0
................................................................TATCCAGGCAGGTGCTGTTCTCTTGG......................................................................................... 26 2 2 0.50 1 0 1 0 0 0 0
..............................................................................................TGAACGCCGCCTGTGTGGTTAGA.............................................................. 23 1 2 0.50 1 0 0 0 1 0 0
..............................................................................................TGAACGGCGCCTGTGAGGTTAGT.............................................................. 23 2 2 0.50 1 0 0 0 1 0 0
..............................................................................................TGAACGGCGCCCGTGTGGTTAGA.............................................................. 23 1 2 0.50 1 1 0 0 0 0 0
..............................................................................................TGAACGGCGCCTGTGCTGTTAG............................................................... 22 2 2 0.50 1 0 0 1 0 0 0
..............................................................................................TGAACGGCGCCTGCGTGGTTAT............................................................... 22 2 2 0.50 1 0 0 0 1 0 0
..............................................................................................TGAACGGCGCCGGTGTGGTTAG............................................................... 22 1 2 0.50 1 1 0 0 0 0 0
..............................................................................................TGAACGGCGCCTGTGTCGTTAGA.............................................................. 23 1 2 0.50 1 0 0 1 0 0 0
..............................................................................................TGAACGGCGCCTGTGTGGAT................................................................. 20 1 2 0.50 1 1 0 0 0 0 0
................................................................TATCCAGGCAGGTGCTTTTCT.............................................................................................. 21 1 2 0.50 1 0 0 1 0 0 0
................................................................TATCCAGGCAGGTGCTTCTCT.............................................................................................. 21 2 5 0.40 2 2 0 0 0 0 0
.....................................................................AGGCAGGTGCTGTTCTC............................................................................................. 17 0 5 0.40 2 0 1 1 0 0 0
..............................................................................................TGAACGGCGCCTGTGTGGTTTTT.............................................................. 23 3 3 0.33 1 0 0 1 0 0 0
................................................................TATCTAGGTAGGTGCTGTTCT.............................................................................................. 21 2 3 0.33 1 1 0 0 0 0 0
................................................................TATCCAGGCAGGTGCTGTC................................................................................................ 19 1 3 0.33 1 1 0 0 0 0 0
..............................................................................................TGAACGGTGCCTGTGTGGTTAT............................................................... 22 2 3 0.33 1 1 0 0 0 0 0
...............................................TGCTGTGTGTGGTGCCC................................................................................................................... 17 0 3 0.33 1 1 0 0 0 0 0
...............................................................................................GAACGGCGTCTGTGTGGTTAT............................................................... 21 2 3 0.33 1 0 0 1 0 0 0
...................................................................................................GGCGCTTGTGTGGTTAGA.............................................................. 18 1 3 0.33 1 0 0 1 0 0 0
................................................................TATCCAGGCAGTTGCTGTT................................................................................................ 19 1 3 0.33 1 0 0 1 0 0 0
................................................................TAACCAGGCAGGTGCTGCTCTCT............................................................................................ 23 2 3 0.33 1 1 0 0 0 0 0
..............................................................................................TGAACGGCGCCTGTGTGGCTA................................................................ 21 1 3 0.33 1 0 0 1 0 0 0
...............................................................................................GAACGGCGCCTGTGTGGCTAGA.............................................................. 22 1 3 0.33 1 0 0 0 1 0 0
..............................................................................................TGAACGGTGCCTGTGTGGTTA................................................................ 21 1 3 0.33 1 0 0 1 0 0 0
...............................................................................................GAACGGCGCCTGTGTGGTTTT............................................................... 21 2 3 0.33 1 0 0 1 0 0 0
................................................................................................AATGGCGCCTGTGTGGTTAGT.............................................................. 21 2 3 0.33 1 1 0 0 0 0 0
.....................................................................AGGCAGGTGCTGTTCTCT............................................................................................ 18 0 3 0.33 1 0 1 0 0 0 0
................................................................TATCCAGGCAGGTGCTGTTCTTAA........................................................................................... 24 3 3 0.33 1 0 0 1 0 0 0
................................................................................................AACGGCGCTTGTGTGGTTAGAT............................................................. 22 2 3 0.33 1 1 0 0 0 0 0
................................................................TATCCAGTCAGGTGCTGTTGT.............................................................................................. 21 2 4 0.25 1 1 0 0 0 0 0
..............................................................................................TGAACGGTGCCTGTGTGGTTAAT.............................................................. 23 3 4 0.25 1 0 0 1 0 0 0
....................................................................CAGGCAGGTGCTGTTCTCTA........................................................................................... 20 1 4 0.25 1 0 1 0 0 0 0
....................................................................CAGGCAGGTGCTGTTC............................................................................................... 16 0 5 0.20 1 0 0 1 0 0 0
......................................................................GGCAGGTGCTGTTCTC............................................................................................. 16 0 6 0.17 1 0 1 0 0 0 0
..............................................................................................TGAACGGCGTCTGTGTGGTTTA............................................................... 22 3 6 0.17 1 1 0 0 0 0 0
................................................................TATCCAGTCATGTGCTGTTCT.............................................................................................. 21 2 6 0.17 1 1 0 0 0 0 0
................................................................TATCCAGGCAGGGGCTGGTCT.............................................................................................. 21 2 7 0.14 1 1 0 0 0 0 0
................................................................TATCCAGGCAGGTGCTGTTAGA............................................................................................. 22 3 13 0.08 1 0 1 0 0 0 0
.....................................................................AGGCAGGTGCTGTTC............................................................................................... 15 0 15 0.07 1 0 1 0 0 0 0
................................................................TATCCAGGCAGGTGCTTCT................................................................................................ 19 2 20 0.05 1 1 0 0 0 0 0

Anti-sense strand reads

CACACTCACACACCCCTTGTGTCCCGTCCAGGAGGTGGAACTTCGGCACGACACACACCACGGGATAGGTCCGTCCACGACAAGAGAAATGATCACTTGCCGCGGACACACCAATCTCATTCCGAGTGTTCTTGTAGCTGAGACCACCGGAGCCCTGGTCACTACACCCGCCTCGGCGT

***********************************************.((((.((..(((.(((.(((.(((((((((((((.((.....)).))))))))))))).))).))).)))..)).))))...************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR066810

testes		 SRR1274764

testes
............................................................................ACGACAAGAGAAAGGATC..................................................................................... 18 1 20 0.05 1 1 0
.........................................................CCACGGGATAGATCC........................................................................................................... 15 1 20 0.05 1 0 1

Generated: 09/01/2015 at 11:46 AM