ID:ssc_11 |
Coordinate:chrX:136187794-136187877 - |
Confidence:Known |
Class:Unknown |
Genomic Locale:intergenic |
[View on miRBase] [View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -33.6 |
 |
|
TCTCAGGAAAACCCAAGATGATTTCGTTGTCGTATCGCAGACGATGTGAACACCTGTAGGTTAGAGGAGATGAAGACGCTTCTCAGTAGAAGAGGAGAAGAGTCTAACTCTCCTGTCCTCCAGTGTTCCTCTTCAGCATTCTAGAAAACCGTAGATAGAGTAGAAGAGCAGGTCCCCATTGAAT
*********************************************..((((((.((.(((....((((((...((((.((((((..........)))))).))))...))))))..))).)))))))).....*************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR139076 testes |
SRR139075 testes |
SRR1274764 testes |
SRR066810 testes |
|---|---|---|---|---|---|---|---|---|---|
| ............................................................TTAGAGGAGATGAAGACGCTT....................................................................................................... | 21 | 0 | 1 | 441.00 | 441 | 365 | 61 | 12 | 3 |
| ..............................................................AGAGGAGATGAAGACGCTTCT..................................................................................................... | 21 | 0 | 1 | 78.00 | 78 | 67 | 10 | 0 | 1 |
| ............................................................TTAGAGGAGATGAAGACGCTTCT..................................................................................................... | 23 | 0 | 1 | 67.00 | 67 | 24 | 11 | 24 | 8 |
| ............................................................TTAGAGGAGATGAAGACGCT........................................................................................................ | 20 | 0 | 1 | 57.00 | 57 | 48 | 8 | 1 | 0 |
| ............................................................TTAGAGGAGATGAAGACGCTTA...................................................................................................... | 22 | 1 | 1 | 47.00 | 47 | 43 | 4 | 0 | 0 |
| ............................................................TTAGAGGAGATGAAGACGCTTC...................................................................................................... | 22 | 0 | 1 | 42.00 | 42 | 15 | 3 | 23 | 1 |
| ..............................................................AGAGGAGATGAAGACGCT........................................................................................................ | 18 | 0 | 1 | 27.00 | 27 | 17 | 10 | 0 | 0 |
| ..............................................................AGAGGAGATGAAGACGCTT....................................................................................................... | 19 | 0 | 1 | 27.00 | 27 | 18 | 9 | 0 | 0 |
| ............................................................TTAGAGGAGATGAAGACGCTTT...................................................................................................... | 22 | 1 | 1 | 14.00 | 14 | 12 | 2 | 0 | 0 |
| .............................................................TAGAGGAGATGAAGACGCTT....................................................................................................... | 20 | 0 | 1 | 11.00 | 11 | 8 | 3 | 0 | 0 |
| ..............................................................AGAGGAGATGAAGACGCTTC...................................................................................................... | 20 | 0 | 1 | 10.00 | 10 | 7 | 3 | 0 | 0 |
| ............................................................TTAGAGGAGATGAAGACGCTA....................................................................................................... | 21 | 1 | 1 | 7.00 | 7 | 6 | 1 | 0 | 0 |
| .............................................................TAGAGGAGATGAAGACGCTTCT..................................................................................................... | 22 | 0 | 1 | 6.00 | 6 | 2 | 3 | 0 | 1 |
| .............................................................TAGAGGAGATGAAGACGCT........................................................................................................ | 19 | 0 | 1 | 4.00 | 4 | 3 | 1 | 0 | 0 |
| ..............................................................AGAGGAGATGAAGACGCTTCTC.................................................................................................... | 22 | 0 | 1 | 4.00 | 4 | 2 | 1 | 0 | 1 |
| ............................................................TTAGAGGAGATGAAGACGCTTCA..................................................................................................... | 23 | 1 | 1 | 4.00 | 4 | 2 | 0 | 2 | 0 |
| ............................................................TTAGAGGAGATGAAGACGCTTAT..................................................................................................... | 23 | 1 | 1 | 3.00 | 3 | 2 | 1 | 0 | 0 |
| ...............................................................GAGGAGATGAAGACGCTTCT..................................................................................................... | 20 | 0 | 1 | 3.00 | 3 | 0 | 3 | 0 | 0 |
| ............................................................TTAGAGGAGATGAAGACGC......................................................................................................... | 19 | 0 | 1 | 3.00 | 3 | 1 | 2 | 0 | 0 |
| ............................................................TTAGAGGAGATGCAGACGCTT....................................................................................................... | 21 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 | 0 |
| ............................................................TTAGAGGAGATGAAGACGCTTTA..................................................................................................... | 23 | 2 | 1 | 3.00 | 3 | 2 | 0 | 1 | 0 |
| ............................................................TTAGAGGAGATGAAGACGTTT....................................................................................................... | 21 | 1 | 1 | 3.00 | 3 | 2 | 1 | 0 | 0 |
| ..............................................................AGAGGAGATGAAGACGCTTCA..................................................................................................... | 21 | 1 | 1 | 3.00 | 3 | 1 | 2 | 0 | 0 |
| ............................................................TTAGAGGAGATGAAGACGCTTGA..................................................................................................... | 23 | 2 | 1 | 3.00 | 3 | 3 | 0 | 0 | 0 |
| ............................................................TTAGAGGAGATGAAGACGCTTAA..................................................................................................... | 23 | 2 | 3 | 2.67 | 8 | 6 | 2 | 0 | 0 |
| .....................................CAGACGATGTGAACACCTGTAGG............................................................................................................................ | 23 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 |
| ............................................................TTCGAGGAGATGAAGACGCTT....................................................................................................... | 21 | 1 | 1 | 2.00 | 2 | 1 | 1 | 0 | 0 |
| ............................................................TTAGAGGAGATGAAGACGCTTG...................................................................................................... | 22 | 1 | 1 | 2.00 | 2 | 1 | 1 | 0 | 0 |
| ..............................................................AGAGGAGATGAAGACGCTTCTAT................................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ..............................................................AGAGGAGATGAAGACGCTTCTAA................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ............................................................TTAGAGGAGATGAAGACGCTAA...................................................................................................... | 22 | 2 | 3 | 1.00 | 3 | 3 | 0 | 0 | 0 |
| .............................................................TAGAGGAGATGAAGACGCTTCTT.................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ..............................................................CGAGGAGATGAAGACGCTTCT..................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 |
| ..............................................................AGAGGAGATGAAGACGCTTCTG.................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ............................................................TTAGAGGAGATGACGACGCT........................................................................................................ | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ............................................................TTAGAGGAGATGGAGACGCTT....................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 |
| ............................................................TTAGAGGAGATGAAGACGCTTTT..................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ..............................................................AGAGGAGATGAATACGCTTC...................................................................................................... | 20 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 |
| ..............................................................AGAGGAGATGAAGACGCTTCTA.................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ............................................................TTAGAGGAGATGAAGACGCTTCG..................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| .............................................................TAGAGGAGATGAAGACGCTTC...................................................................................................... | 21 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 |
| ............................................................TTAGAGGAGATGAAGACGCCT....................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ............................................................TTAGAGGAGATGAAGATGCTTA...................................................................................................... | 22 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ............................................................TTCGAGGAGATGTAGACGCTTTT..................................................................................................... | 23 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ............................................................TTAGAGGAGATGAAGCCGCTT....................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ............................................................TTAGAGGGGATGAAGACGCTT....................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 |
| ..............................................................AGAGGGGATGAAGACGCTTCT..................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ..............................................................AGAGGAGATGAAGACGC......................................................................................................... | 17 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ............................................................TTAGAGGAGATGAAGACGCTTCTA.................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 |
| ..............................................................AGAGGAGATGAAGACGCTTCTT.................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| .............................................................TAGAGGAGATGAAGACGCTTT...................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ............................................................TTTGAGGAGATGAAGACGCTT....................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 |
| ..............................................................AGAGGTGATGAAGACGCTTCTCA................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ............................................................TTAGAGGAGCTGAAGACGCTT....................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ............................................................TTCGAGGAGATGAAGACGCT........................................................................................................ | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| .................................................................................................AAGAGTCTAACTCTCCTGTCC.................................................................. | 21 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 |
| ............................................................TTAGAGTAGATGAAGACGCTT....................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ..............................................................AGAGGTGATGACGACGCTTCT..................................................................................................... | 21 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| .............................................................TAGAGGAGATGAAGACGCTTGA..................................................................................................... | 22 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ..............................................................AGAGGATATGAAGACGCTTCT..................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ..............................................................AGAGGAGATGAAGACGCTTCTGA................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ............................................................TTAGAGGAGATGAAGACGCTAT...................................................................................................... | 22 | 2 | 3 | 0.67 | 2 | 2 | 0 | 0 | 0 |
| .................................................................................................AAGAGTCTAACTCTCCTGTCT.................................................................. | 21 | 1 | 2 | 0.50 | 1 | 0 | 0 | 0 | 1 |
| ............................................................TTAGAGGAGATGAAGACGA......................................................................................................... | 19 | 1 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 |
| ..............................................................AGAGGAGATAAAGACGCTTCT..................................................................................................... | 21 | 1 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 |
| ............................................................TTCGAGGAGATGAAGCCGCTTTT..................................................................................................... | 23 | 3 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ..............................................................AGAGGAGATGAAGACGCTTT...................................................................................................... | 20 | 1 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 |
| ............................................................TTAGAGGAGATGAAGACGCTTAAT.................................................................................................... | 24 | 3 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 |
| ............................................................TTAGAGGAGATGAAGACGCTTTAT.................................................................................................... | 24 | 3 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 |
| .............................................................TAGAGGAGATGAAGACGCTTAA..................................................................................................... | 22 | 2 | 5 | 0.20 | 1 | 1 | 0 | 0 | 0 |
| ..............................................................AGAGGAGATCAAGACGCTTG...................................................................................................... | 20 | 2 | 6 | 0.17 | 1 | 0 | 1 | 0 | 0 |
|
AGAGTCCTTTTGGGTTCTACTAAAGCAACAGCATAGCGTCTGCTACACTTGTGGACATCCAATCTCCTCTACTTCTGCGAAGAGTCATCTTCTCCTCTTCTCAGATTGAGAGGACAGGAGGTCACAAGGAGAAGTCGTAAGATCTTTTGGCATCTATCTCATCTTCTCGTCCAGGGGTAACTTA
***************************************************..((((((.((.(((....((((((...((((.((((((..........)))))).))))...))))))..))).)))))))).....********************************************* |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR066810 testes |
|---|---|---|---|---|---|---|
| ................................................TTGTCTACATCCAATCTCCT.................................................................................................................... | 20 | 2 | 11 | 0.09 | 1 | 1 |
Generated: 09/01/2015 at 11:45 AM