ID:

ssc-mir-99b

Coordinate:

chr6:51858217-51858286 +

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-39.5 -39.1 -39.0

Sense Strand Reads

CCTGGGTTCCCTGGGGAGGAGGGGGCCGGGGGCCCGGATTCCTGGGTCCTGGCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCCGCACACAAGCTCGTGTCTGTGGGTCCGTGTCGGGGGCTCTCCATCGCGGCTGGGGCCTCCCCGGCCCTCCCCGCCCGCCCT

*****************************************..((.(((((((((..(((((((((..(((.(((((((........)))))....)).)))..)))))))))..))))))))).)).....**************************************
Read size # Mismatch Hit Count Total Norm Total SRR066809

ovary
SRR066810

testes
SRR139075

testes
SRR1274763

ovary
SRR1274764

testes
SRR139076

testes
........................................................CACCCGTAGAACCGACCTTGCG............................................................................................ 22 0 1 18357.00 18357 7785 6034 2018 1905 388 227
........................................................CACCCGTAGAACCGACCTTGC............................................................................................. 21 0 1 7560.00 7560 2506 1941 1259 1286 395 173
........................................................CACCCGTAGAACCGACCTTGCGT........................................................................................... 23 1 1 3470.00 3470 1283 965 928 149 34 111
........................................................CACCCGTAGAACCGACCTTGCGA........................................................................................... 23 1 1 1793.00 1793 375 234 603 365 111 105
........................................................CACCCGTAGAACCGACCTTG.............................................................................................. 20 0 1 655.00 655 223 161 87 137 26 21
.........................................................ACCCGTAGAACCGACCTTGCG............................................................................................ 21 0 1 359.00 359 140 125 57 17 6 14
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGT..................................................... 23 0 1 257.00 257 94 93 65 4 1 0
........................................................CACCCGTAGAACCGACCTTGCA............................................................................................ 22 1 1 198.00 198 25 20 60 60 22 11
........................................................CACCCGTAGAACCGACCTTGCGG........................................................................................... 23 0 1 133.00 133 16 6 96 1 0 14
..............................................................................................CAAGCTCGTGTCTGTGGGTCCG...................................................... 22 0 1 131.00 131 46 54 23 6 1 1
........................................................CACCCGTAGAACCGACCTT............................................................................................... 19 0 1 122.00 122 27 12 27 51 5 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGA..................................................... 23 1 1 121.00 121 26 12 67 9 3 4
........................................................CACCCGTAGAACCGACCT................................................................................................ 18 0 1 105.00 105 6 0 10 76 12 1
..............................................................................................CAAGCTCGTGTCTGTGGGTC........................................................ 20 0 1 103.00 103 41 32 24 4 0 2
.........................................................ACCCGTAGAACCGACCTTGC............................................................................................. 20 0 1 101.00 101 39 26 22 5 4 5
.........................................................ACCCGTAGAACCGACCTTGCGT........................................................................................... 22 1 1 99.00 99 25 34 28 1 0 11
..............................................................................................CAAGCTCGTGTCTGTGGGT......................................................... 19 0 1 84.00 84 46 31 5 1 0 1
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGTT.................................................... 24 1 1 82.00 82 28 25 14 6 6 3
..............................................................................................CAAGCTCGTGTCTGTGGGTCC....................................................... 21 0 1 72.00 72 28 16 18 7 0 3
............................................................CGTAGAACCGACCTTGCG............................................................................................ 18 0 1 63.00 63 10 12 1 28 12 0
........................................................CACCCGTAGAACCGACCTTGCGTT.......................................................................................... 24 2 1 61.00 61 27 9 12 7 4 2
........................................................CACCCGTAGAACCGACCTTGA............................................................................................. 21 1 1 61.00 61 13 1 12 14 13 8
.........................................................ACCCGTAGAACCGACCTTGCGA........................................................................................... 22 1 1 58.00 58 6 5 36 5 3 3
........................................................CACCCGTAGAACCGACC................................................................................................. 17 0 1 51.00 51 4 1 38 3 4 1
........................................................CACCCGTAGAACCGACCTTGCT............................................................................................ 22 1 1 42.00 42 13 11 11 6 0 1
........................................................CACCCGTAGAACCGACCTTGCGAA.......................................................................................... 24 2 1 37.00 37 3 1 12 10 7 4
........................................................CACCCGTAGAACCGACCTTGT............................................................................................. 21 1 1 36.00 36 13 9 6 4 1 3
...........................................................CCGTAGAACCGACCTTGCG............................................................................................ 19 0 1 34.00 34 1 1 0 20 12 0
........................................................CACCCGTAGAACCGACCTTGCAT........................................................................................... 23 2 1 30.00 30 3 0 18 6 2 1
........................................................CACCCGTAGAACCGATCTTGCG............................................................................................ 22 1 1 26.00 26 4 2 18 2 0 0
............................................................CGTAGAACCGACCTTGC............................................................................................. 17 0 1 26.00 26 5 1 1 14 5 0
........................................................CACCTGTAGAACCGACCTTGCG............................................................................................ 22 1 1 22.00 22 6 1 13 1 0 1
........................................................CACCCGTAGAACCGACCTTGCGC........................................................................................... 23 1 1 21.00 21 5 4 9 0 1 2
........................................................CACCCGTAGAACCGACCTTGCGAT.......................................................................................... 24 2 1 21.00 21 9 4 7 0 0 1
........................................................CACTCGTAGAACCGACCTTGCG............................................................................................ 22 1 1 21.00 21 2 3 12 0 0 4
........................................................CATCCGTAGAACCGACCTTGCG............................................................................................ 22 1 1 21.00 21 7 0 11 0 0 3
........................................................TACCCGTAGAACCGACCTTGCG............................................................................................ 22 1 1 20.00 20 11 5 3 1 0 0
........................................................CACCCGTAGAACCGACCTTGCGTA.......................................................................................... 24 2 1 18.00 18 1 0 16 0 0 1
........................................................CACTCGTAGAACCGACCTTGC............................................................................................. 21 1 1 16.00 16 1 1 13 0 0 1
.......................................................CCACCCGTAGAACCGACCTTGCG............................................................................................ 23 0 1 16.00 16 12 4 0 0 0 0
........................................................CACCCGTAGAACCGACCTTGCAA........................................................................................... 23 2 1 16.00 16 0 0 5 8 1 2
........................................................CACCCGTAGAACCGACTTTGC............................................................................................. 21 1 1 15.00 15 0 1 12 1 0 1
........................................................CACCCGTAGAACCGCCCTTGCG............................................................................................ 22 1 1 15.00 15 2 2 9 1 0 1
........................................................CACCTGTAGAACCGACCTTGCGT........................................................................................... 23 2 1 15.00 15 0 4 8 0 0 3
.........................................................ACCCGTAGAACCGACCTTG.............................................................................................. 19 0 1 15.00 15 4 5 3 1 1 1
........................................................CACCCGTAGAACTGACCTTGCG............................................................................................ 22 1 1 15.00 15 3 4 3 4 1 0
...........................................................CCGTAGAACCGACCTTGC............................................................................................. 18 0 1 14.00 14 0 0 1 8 5 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCT....................................................... 21 1 1 14.00 14 5 6 3 0 0 0
........................................................CACCCGTAGAACCGACCTTGTG............................................................................................ 22 1 1 13.00 13 4 3 3 1 0 2
............................................................CGTAGAACCGACCTTGCGA........................................................................................... 19 1 1 13.00 13 1 1 0 6 5 0
...........................................................CCGTAGAACCGACCTTGCGA........................................................................................... 20 1 1 12.00 12 0 0 0 6 5 1
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGTA.................................................... 24 1 1 12.00 12 5 3 3 1 0 0
........................................................CACCCGTAGAACCGACCTTGAA............................................................................................ 22 2 1 12.00 12 0 0 3 6 3 0
........................................................CACCCGTAGAACCGGCCTTGCG............................................................................................ 22 1 1 11.00 11 4 4 3 0 0 0
........................................................CAGCCGTAGAACCGACCTTGCG............................................................................................ 22 1 1 11.00 11 5 5 1 0 0 0
........................................................CACCCGTAGAACCGACTTTGCG............................................................................................ 22 1 1 11.00 11 1 2 8 0 0 0
........................................................CACCCGTAGAACCGATTTTGCG............................................................................................ 22 2 1 10.00 10 0 0 9 0 0 1
........................................................TACCCGTAGAACCGACCTTGC............................................................................................. 21 1 1 10.00 10 4 4 1 0 1 0
........................................................AACCCGTAGAACCGACCTTGCG............................................................................................ 22 1 1 10.00 10 7 3 0 0 0 0
........................................................AACCCGTAGAACCGACCTTGC............................................................................................. 21 1 1 10.00 10 4 2 4 0 0 0
.......................................................CCACCCGTAGAACCGACCTTGC............................................................................................. 22 0 1 10.00 10 4 4 0 2 0 0
........................................................CACCTGTAGAACCGACCTTGCGA........................................................................................... 23 2 1 10.00 10 0 0 5 1 0 4
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGAT.................................................... 24 2 1 10.00 10 6 0 2 2 0 0
........................................................CACCCGTAGAACCGACCTTGCGAAA......................................................................................... 25 3 1 10.00 10 1 0 1 5 1 2
........................................................CACCTGTAGAACCGACCTTGC............................................................................................. 21 1 1 9.00 9 3 0 5 0 0 1
........................................................CACCCGTAGAACCGATCTTGCGA........................................................................................... 23 2 1 9.00 9 1 0 6 0 0 2
........................................................CACCCATAGAACCGACCTTGCG............................................................................................ 22 1 1 9.00 9 5 2 0 2 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGG..................................................... 23 1 1 9.00 9 0 0 9 0 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGTTT................................................... 25 1 1 9.00 9 5 1 1 2 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGGT.................................................... 24 2 1 9.00 9 0 0 9 0 0 0
........................................................ACCCTGTAGAACCGACCTTGCG............................................................................................ 22 3 4 9.00 36 12 24 0 0 0 0
........................................................CACCCGTAGAACCAACCTTGCG............................................................................................ 22 1 1 9.00 9 5 3 1 0 0 0
........................................................CATCCGTAGAACCGACCTTGC............................................................................................. 21 1 1 9.00 9 1 1 5 1 0 1
........................................................CACCCGTAGAACCGACCTTGTGT........................................................................................... 23 2 1 9.00 9 5 0 2 1 0 1
........................................................CACCCGTAGAACTGACCTTGC............................................................................................. 21 1 1 9.00 9 3 1 2 3 0 0
........................................................CACCCGTAGAACCGACCCTGCG............................................................................................ 22 1 1 9.00 9 4 4 1 0 0 0
............................................................CGTAGAACCGACCTTGCGT........................................................................................... 19 1 1 8.00 8 2 2 0 3 1 0
........................................................CACCCGTAGAACCGACCTTGCGGT.......................................................................................... 24 1 1 8.00 8 4 1 3 0 0 0
........................................................CACCCGTAGAACCGCCCTTGCGT........................................................................................... 23 2 1 8.00 8 0 1 6 0 0 1
........................................................CACCCGTAGAACCGACCTTTCG............................................................................................ 22 1 1 8.00 8 4 0 4 0 0 0
.........................................................ACCCGTAGAACCGACCTTGCGG........................................................................................... 22 0 1 8.00 8 0 0 7 0 0 1
..............................................................................................CAAGCTCGTGTCTGTGGGTCCT...................................................... 22 1 1 7.00 7 2 0 1 1 3 0
.......................................................CCACCCGTAGAACCGACCTTGCGT........................................................................................... 24 1 1 7.00 7 5 2 0 0 0 0
........................................................CACCCGTAGAACCGACCTCGCG............................................................................................ 22 1 1 7.00 7 2 4 0 1 0 0
........................................................CACCCGTAGAACCGCCCTTGCGA........................................................................................... 23 2 1 7.00 7 0 0 6 0 0 1
........................................................CACCCGTGGAACCGACCTTGCG............................................................................................ 22 1 1 7.00 7 4 3 0 0 0 0
........................................................CACCCGTAGAATCGACCTTGCG............................................................................................ 22 1 1 7.00 7 3 0 2 1 0 1
........................................................CACCCGCAGAACCGACCTTGCG............................................................................................ 22 1 1 7.00 7 3 1 2 0 0 1
........................................................CACCCGTAGAACCGACTTTGCGT........................................................................................... 23 2 1 7.00 7 2 0 5 0 0 0
........................................................CATCCGTAGAACCGACCTTGCGT........................................................................................... 23 2 1 7.00 7 2 0 4 0 0 1
........................................................CACCCGTAGCACCGACCTTGC............................................................................................. 21 1 1 7.00 7 0 0 4 1 1 1
........................................................CACCCGTAGAACCGCCCTTGC............................................................................................. 21 1 1 6.00 6 0 0 6 0 0 0
........................................................CACCCGTAGAACCGACCCTGC............................................................................................. 21 1 1 6.00 6 1 3 2 0 0 0
..........................................................CCCGTAGAACCGACCTTGCG............................................................................................ 20 0 1 6.00 6 0 0 0 4 2 0
.........................................................ACCCGTAGAACCGACCTTGCA............................................................................................ 21 1 1 6.00 6 1 0 5 0 0 0
........................................................AACCCGTAGAACCGACCTTGCGT........................................................................................... 23 2 1 6.00 6 2 2 2 0 0 0
........................................................CACCCGTAGAACCGACCTTGCGAG.......................................................................................... 24 1 1 6.00 6 3 1 0 2 0 0
........................................................CACTCGTAGAACCGACCTTGCGT........................................................................................... 23 2 1 6.00 6 0 0 6 0 0 0
........................................................CACCCGTAGAACCGATCTTGC............................................................................................. 21 1 1 6.00 6 0 0 6 0 0 0
........................................................CACCCGTAGAACCGGCCTTGC............................................................................................. 21 1 1 6.00 6 2 0 4 0 0 0
........................................................CACCCGTAGAACCGACCATGCG............................................................................................ 22 1 1 6.00 6 3 2 1 0 0 0
........................................................GACCCGTAGAACCGACCTTGCG............................................................................................ 22 1 1 6.00 6 4 2 0 0 0 0
........................................................CACCCGTAGAACCGATTTTGC............................................................................................. 21 2 1 6.00 6 0 1 4 0 0 1
........................................................CACCCGTAGAGCCGACCTTGCG............................................................................................ 22 1 1 5.00 5 3 2 0 0 0 0
........................................................CACCCGTAGCACCGACCTTGCGT........................................................................................... 23 2 1 5.00 5 0 0 3 0 0 2
........................................................CACCCGTAGAACCGACCTTGCGAGA......................................................................................... 25 2 1 5.00 5 1 0 0 2 2 0
........................................................CGCCCGTAGAACCGACCTTGCG............................................................................................ 22 1 1 5.00 5 4 1 0 0 0 0
........................................................CACCCGTAGAACCGAC.................................................................................................. 16 0 1 5.00 5 1 0 2 2 0 0
........................................................CACCCGTAGAACCTACCTTGCG............................................................................................ 22 1 1 5.00 5 0 3 2 0 0 0
........................................................TACCCGTAGAACCGACCTTGCGT........................................................................................... 23 2 1 5.00 5 4 1 0 0 0 0
........................................................CACCCGTAAAACCGACCTTGCG............................................................................................ 22 1 1 5.00 5 2 2 1 0 0 0
........................................................CACCCGTAGAACCGACCTTGCC............................................................................................ 22 1 1 5.00 5 2 1 0 0 1 1
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGATT................................................... 25 2 1 5.00 5 3 0 0 2 0 0
........................................................CACCCGTAGAACCGACCTTGCGGCC......................................................................................... 25 2 1 5.00 5 0 0 3 0 0 2
........................................................CACTCGTAGAACCGACCTTGCGG........................................................................................... 23 1 1 5.00 5 0 0 5 0 0 0
........................................................CACCCGTAGAACCGATTTTGCGT........................................................................................... 23 3 1 5.00 5 0 0 2 0 0 3
........................................................CGCCCGTAGAACCGACCTTGC............................................................................................. 21 1 1 4.00 4 1 1 1 0 0 1
........................................................CACCCGTAGAACCGACCTCGC............................................................................................. 21 1 1 4.00 4 1 0 2 1 0 0
........................................................CATTCGTAGAACCGACCTTGCG............................................................................................ 22 2 1 4.00 4 0 0 2 0 0 2
........................................................CACTTGTAGAACCGACCTTGCG............................................................................................ 22 2 1 4.00 4 0 0 4 0 0 0
........................................................CACCCGTAGAACCGAGCTTGCGT........................................................................................... 23 2 1 4.00 4 2 1 1 0 0 0
..............................................................................................CAGGCTCGTGTCTGTGGGTC........................................................ 20 1 1 4.00 4 0 0 3 1 0 0
........................................................CACCCGTATAACCGACCTTGCG............................................................................................ 22 1 1 4.00 4 0 1 2 0 0 1
........................................................CACCCGTAGAACCGACCTTGAG............................................................................................ 22 1 1 4.00 4 4 0 0 0 0 0
........................................................CATCCGTAGAACCGACCTTGCGA........................................................................................... 23 2 1 4.00 4 0 0 2 0 0 2
........................................................CACCCGTAGAACCGACCTA............................................................................................... 19 1 1 4.00 4 1 0 1 1 1 0
........................................................CACCCGTAGAACCGACATTGC............................................................................................. 21 1 1 4.00 4 3 0 1 0 0 0
........................................................CACCCTTAGAACCGACCTTGCG............................................................................................ 22 1 1 4.00 4 0 0 4 0 0 0
........................................................TACCCGTAGAACCGACCTTGCGA........................................................................................... 23 2 1 4.00 4 1 0 3 0 0 0
.........................................................ACCCGTAGAACCGACCTTGCGTA.......................................................................................... 23 2 1 4.00 4 0 0 3 0 0 1
........................................................CACCCGTAGAACCGATCTTGCGT........................................................................................... 23 2 1 4.00 4 1 0 2 0 0 1
........................................................CACCCGTGGAACCGACCTTGC............................................................................................. 21 1 1 4.00 4 0 1 2 0 1 0
........................................................CACCCGTAGAACCGACCTTGCGTTT......................................................................................... 25 3 1 4.00 4 2 2 0 0 0 0
........................................................CACCCGTCGAACCGACCTTGCG............................................................................................ 22 1 1 4.00 4 0 0 3 0 0 1
........................................................CACCCGTAGAACCGACCTTGCGGA.......................................................................................... 24 1 1 4.00 4 0 0 4 0 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGAA.................................................... 24 2 1 4.00 4 0 0 3 0 0 1
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGC..................................................... 23 1 1 4.00 4 1 1 2 0 0 0
........................................................CACCCGTAGAACCGACCTTACG............................................................................................ 22 1 1 4.00 4 3 1 0 0 0 0
........................................................CACCCGTAGAACCGACCTTT.............................................................................................. 20 1 1 4.00 4 1 1 2 0 0 0
........................................................CACCCGCAGAACCGACCTTGCGT........................................................................................... 23 2 1 4.00 4 0 1 3 0 0 0
........................................................CAGCCGTAGAACCGACCTTGC............................................................................................. 21 1 1 4.00 4 1 2 1 0 0 0
........................................................CACCCGTAGAATCGACCTTGCGA........................................................................................... 23 2 1 4.00 4 2 1 0 0 0 1
........................................................CACCCGTAGAACCAACCTTGCGT........................................................................................... 23 2 1 4.00 4 2 1 0 0 0 1
........................................................CACCCGTAGAACCGACTTTGCGA........................................................................................... 23 2 1 3.00 3 0 0 3 0 0 0
........................................................CACCCGTAGAACCTACCTTGC............................................................................................. 21 1 1 3.00 3 0 0 3 0 0 0
........................................................CACCCGTAGAACCGAGCTTGC............................................................................................. 21 1 1 3.00 3 1 0 2 0 0 0
........................................................CACCCGTAGAATCGACCTTGC............................................................................................. 21 1 1 3.00 3 1 1 1 0 0 0
........................................................CACCCTTAGAACCGACCTTGCGA........................................................................................... 23 2 1 3.00 3 1 0 1 0 0 1
........................................................CACCCGTAGAACCGACCTTTCGT........................................................................................... 23 2 1 3.00 3 1 0 2 0 0 0
.........................................................ACCCGTAGAACCGACCTTGCGAA.......................................................................................... 23 2 1 3.00 3 0 0 2 1 0 0
........................................................CACCCGTAGAACCGAACTTGCG............................................................................................ 22 1 1 3.00 3 1 0 2 0 0 0
...............................................................................................AAGCTCGTGTCTGTGGGTCCGT..................................................... 22 0 1 3.00 3 2 1 0 0 0 0
........................................................CACCCGTAGAACCGACCTTGTGA........................................................................................... 23 2 1 3.00 3 0 0 1 0 0 2
........................................................CACCCGTAGAACCGACCA................................................................................................ 18 1 1 3.00 3 0 0 1 2 0 0
.....................................................ATTCACCCGTAGAACCGACCTTGCG............................................................................................ 25 2 1 3.00 3 2 1 0 0 0 0
........................................................CACCCGTAGAACCGACATTGCG............................................................................................ 22 1 1 3.00 3 0 1 2 0 0 0
.........................................................ACCCGTAGAACCGACCTTTC............................................................................................. 20 1 1 3.00 3 1 1 1 0 0 0
........................................................CACCCGTAGAACCGACCTTCC............................................................................................. 21 1 1 3.00 3 1 1 0 1 0 0
........................................................CACCCGAAGAACCGACCTTGCG............................................................................................ 22 1 1 3.00 3 0 1 2 0 0 0
........................................................CACCCGTAGCACCGACCTTGCGA........................................................................................... 23 2 1 3.00 3 0 0 3 0 0 0
........................................................AACCCGTAGAACCGACCTTGCGA........................................................................................... 23 2 1 3.00 3 2 0 1 0 0 0
........................................................CACCCGTAGAACCCACCTTGC............................................................................................. 21 1 1 3.00 3 0 0 1 0 1 1
.........................................................CACCGTAGAACCGACCTTG.............................................................................................. 19 2 1 3.00 3 0 0 3 0 0 0
........................................................CACCCGTCGAACCGACCTTGC............................................................................................. 21 1 1 3.00 3 1 0 2 0 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCA...................................................... 22 1 1 3.00 3 1 2 0 0 0 0
........................................................CACCCGTAGAACCGTCCTTGCG............................................................................................ 22 1 1 3.00 3 0 1 1 0 0 1
........................................................CACCAGTAGAACCGACCTTGCG............................................................................................ 22 1 1 3.00 3 2 0 1 0 0 0
........................................................CACCCGTAGAACAGACCTTGCG............................................................................................ 22 1 1 3.00 3 2 0 0 0 1 0
........................................................CACTTGTAGAACCGACCTTGCGT........................................................................................... 23 3 1 3.00 3 0 0 3 0 0 0
........................................................CACCCGTAGAACCGACCTTA.............................................................................................. 20 1 1 3.00 3 0 0 0 1 2 0
........................................................CATCCGTAGAACCGACCTTGCGAA.......................................................................................... 24 3 1 3.00 3 0 0 3 0 0 0
.....................................................ATTCACCCGTAGAACCGACCTTGCGT........................................................................................... 26 3 1 3.00 3 0 3 0 0 0 0
........................................................CACCCGTAGAACCGACA................................................................................................. 17 1 1 3.00 3 3 0 0 0 0 0
........................................................CACACGTAGAACCGACCTTGCG............................................................................................ 22 1 1 3.00 3 2 1 0 0 0 0
........................................................CACCCGTAGAGCCGACCTTGC............................................................................................. 21 1 1 3.00 3 1 2 0 0 0 0
........................................................CACCCGTAGAACCAACCTTG.............................................................................................. 20 1 1 3.00 3 0 2 1 0 0 0
........................................................CACCCGTAGAACCGCCCTTGCGC........................................................................................... 23 2 1 3.00 3 0 0 3 0 0 0
.....................................................ATTCACCCGTAGAACCGACCTTGC............................................................................................. 24 2 1 3.00 3 1 2 0 0 0 0
........................................................CACCCGCAGAACCGACCTTGC............................................................................................. 21 1 1 3.00 3 1 0 1 0 0 1
........................................................CACCCGTAGCACCGACCTTGCG............................................................................................ 22 1 1 3.00 3 0 0 3 0 0 0
........................................................CACCCGTAGAGCCGACCTTGCGT........................................................................................... 23 2 1 3.00 3 2 0 1 0 0 0
........................................................CACCCGTAGAACCGACCTTGCGCA.......................................................................................... 24 2 1 3.00 3 0 0 2 1 0 0
........................................................CACCCGTAGATCCGATCTTGCG............................................................................................ 22 2 2 2.50 5 0 0 5 0 0 0
........................................................CACCCGTAGAACCGACCTTGCGTAG......................................................................................... 25 2 1 2.00 2 1 1 0 0 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCTTT.................................................... 24 2 1 2.00 2 0 1 0 1 0 0
........................................................CACCCGTAGAACCGACCTTGCGTTA......................................................................................... 25 3 1 2.00 2 0 0 0 1 1 0
........................................................CACCCGTAGAACCGACCTTGCGACA......................................................................................... 25 3 1 2.00 2 1 0 1 0 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGGCCGT..................................................... 23 1 1 2.00 2 0 2 0 0 0 0
........................................................CACCCGTAGAACCGACCTTACGT........................................................................................... 23 2 1 2.00 2 0 1 0 1 0 0
........................................................CACCCGTCGAACCGACCTTGCGA........................................................................................... 23 2 1 2.00 2 0 0 2 0 0 0
..................................CGGATTCCTGGGTCCTGGCACC.................................................................................................................. 22 0 1 2.00 2 0 0 0 2 0 0
........................................................CACGCGTAGAACCGACCTTGCG............................................................................................ 22 1 1 2.00 2 1 0 1 0 0 0
........................................................CATCCGTAGAACCGACCTTGCA............................................................................................ 22 2 1 2.00 2 0 0 2 0 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGTAT................................................... 25 1 1 2.00 2 1 1 0 0 0 0
..............................................................................................TAAGCTCGTGTCTGTGGGTCCGT..................................................... 23 1 1 2.00 2 0 2 0 0 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGTAA................................................... 25 2 1 2.00 2 0 0 1 1 0 0
........................................................CACCGGTAGAACCGACCTTGC............................................................................................. 21 1 1 2.00 2 1 0 1 0 0 0
........................................................CACCCGTAGAATTGACCTTGC............................................................................................. 21 2 1 2.00 2 0 0 2 0 0 0
........................................................CACCCGTAGAACCGACCTTGCGATA......................................................................................... 25 3 1 2.00 2 0 0 1 1 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCA....................................................... 21 1 1 2.00 2 1 0 0 0 0 1
..........................................................CCCGTAGAACCGACCTTGCGA........................................................................................... 21 1 1 2.00 2 0 0 0 2 0 0
........................................................CACCCGTAGATCCGACCTTGCG............................................................................................ 22 1 1 2.00 2 0 1 1 0 0 0
.........................................................ACCCGTAGAACCGACCTTGCGGT.......................................................................................... 23 1 1 2.00 2 0 0 2 0 0 0
...............................................................................................AAGCTCGTGTCTGTGGGTCCGA..................................................... 22 1 1 2.00 2 1 0 1 0 0 0
.......................................................TCACCCGTAGAACCGACCTTGCG............................................................................................ 23 1 1 2.00 2 0 1 1 0 0 0
.........................................................ACCTGTAGAACCGACCTTGCGT........................................................................................... 22 2 1 2.00 2 0 0 2 0 0 0
........................................................CACCCGTAGAACCGACCTTGGG............................................................................................ 22 1 1 2.00 2 2 0 0 0 0 0
........................................................CACCCGTAGAAGCGACCTTGCG............................................................................................ 22 1 1 2.00 2 1 0 1 0 0 0
........................................................CACCCGTAGAACCGACCTGGCG............................................................................................ 22 1 1 2.00 2 0 0 2 0 0 0
........................................................CACCCGTAGAACCGAGCTTGCG............................................................................................ 22 1 1 2.00 2 0 2 0 0 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCAT..................................................... 23 1 1 2.00 2 0 2 0 0 0 0
........................................................CACCCGTAAAACCGACCTTGC............................................................................................. 21 1 1 2.00 2 0 1 1 0 0 0
........................................................CACCCGTAGAACCGACCTGGC............................................................................................. 21 1 1 2.00 2 0 1 0 0 0 1
........................................................CGCCCGTAGAACCGACCTTGCGT........................................................................................... 23 2 1 2.00 2 0 1 1 0 0 0
........................................................AACCCGTAGATCCGACCTTGCG............................................................................................ 22 2 3 2.00 6 1 1 4 0 0 0
........................................................CACCCGTAGAACCGACCTTGCGAC.......................................................................................... 24 2 1 2.00 2 0 0 2 0 0 0
........................................................CACCCGTAGAACCGACCTTGG............................................................................................. 21 1 1 2.00 2 0 0 0 2 0 0
........................................................CAGCCGTAGAACCGACCTTGCGT........................................................................................... 23 2 1 2.00 2 1 1 0 0 0 0
........................................................CACTTGTAGAACCGACCTTGC............................................................................................. 21 2 1 2.00 2 0 0 2 0 0 0
.........................................................ACCCGTAGAACCGACCTTA.............................................................................................. 19 1 1 2.00 2 0 0 0 0 0 2
........................................................CACCCGTAGAACCGACCTTGCGTAA......................................................................................... 25 3 1 2.00 2 0 0 1 0 0 1
........................................................CACTCGTAGAACCGACCTTGCGTT.......................................................................................... 24 3 1 2.00 2 0 0 2 0 0 0
..............................................................................................CAAGCTCGTGTCTGTGGG.......................................................... 18 0 1 2.00 2 0 1 1 0 0 0
........................................................CACCCGTATAACCGACCTTGC............................................................................................. 21 1 1 2.00 2 1 0 1 0 0 0
.............................................................GTAGAACCGACCTTGC............................................................................................. 16 0 1 2.00 2 0 1 0 0 1 0
.......................................................ACACCCGTAGAACCGACCTTGC............................................................................................. 22 1 1 2.00 2 2 0 0 0 0 0
........................................................CACCCGTAGAATTGACCTTGCG............................................................................................ 22 2 1 2.00 2 1 0 1 0 0 0
........................................................CACCCGTAGAACCGACCTAGC............................................................................................. 21 1 1 2.00 2 0 1 0 1 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCTT..................................................... 23 1 1 2.00 2 1 1 0 0 0 0
.........................................................ACCCGTAGAACCGACC................................................................................................. 16 0 1 2.00 2 1 0 1 0 0 0
.........................................................ACCCGTAGAACCGACCTTGCAA........................................................................................... 22 2 1 2.00 2 0 0 1 0 0 1
..........................................................CACGTAGAACCGACCTTGCGT........................................................................................... 21 2 1 2.00 2 0 0 1 0 0 1
........................................................CACCCGTAGAACCGACCC................................................................................................ 18 1 1 2.00 2 0 0 1 1 0 0
........................................................CACCCGTAGAACCGCCCTTG.............................................................................................. 20 1 1 2.00 2 1 0 1 0 0 0
........................................................CACCCGTAGTACCGACCTTGCG............................................................................................ 22 1 1 2.00 2 1 1 0 0 0 0
........................................................CACTCGTAGAACCGACCTTGCGA........................................................................................... 23 2 1 2.00 2 0 0 1 0 0 1
........................................................CACCCGTAGAACCGACCTTGCGGG.......................................................................................... 24 0 1 2.00 2 0 1 1 0 0 0
........................................................CACCCGTAGAACCGACCTTGCGGGGCCTTCG................................................................................... 31 0 1 2.00 2 1 1 0 0 0 0
........................................................CACCCATAGAACCGACCTTGCGT........................................................................................... 23 2 1 2.00 2 0 1 1 0 0 0
........................................................CACCCGTAGAACCGACCTTGCCAGC......................................................................................... 25 3 1 2.00 2 0 0 0 0 0 2
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGAAT................................................... 25 2 1 2.00 2 0 1 0 1 0 0
...............................................................................................AAGCTCGTGTCTGTGGGTCCGTT.................................................... 23 1 1 2.00 2 0 0 1 0 0 1
........................................................CACCCTTAGAACCGACCTTGCGT........................................................................................... 23 2 1 2.00 2 1 0 1 0 0 0
..........................................................CCCGTAGAACCGACCTTGC............................................................................................. 19 0 1 2.00 2 0 0 0 1 1 0
........................................................CACCCGTAGAACCGACCTTGCGAGAAC....................................................................................... 27 3 1 2.00 2 0 0 1 0 0 1
........................................................CACCCGTAGAACCGTCCTTGC............................................................................................. 21 1 1 2.00 2 0 0 0 0 0 2
..............................................................................................CAAGCTCGTGTCTGTGGGTTCGT..................................................... 23 1 1 2.00 2 0 0 2 0 0 0
........................................................CACCCGTAGAACCGAATTTGT............................................................................................. 21 3 10 1.70 17 9 8 0 0 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTA........................................................ 20 1 2 1.50 3 1 2 0 0 0 0
........................................................CACCCGTAGATCCGATCTTGC............................................................................................. 21 2 2 1.50 3 0 0 3 0 0 0
...........................................................CCGTAGAACCGACCTTGCGAGA......................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0
............................................................CGTAGAACCGACCTTG.............................................................................................. 16 0 1 1.00 1 1 0 0 0 0 0
........................................................CACCCGTAGAACCGACCTTGCAGA.......................................................................................... 24 2 1 1.00 1 0 0 0 1 0 0
........................................................CACCCGTAGAAGCGACCTTGCGT........................................................................................... 23 2 1 1.00 1 0 0 1 0 0 0
.........................................................ACCCGTAGAACCGACCTTAA............................................................................................. 20 2 1 1.00 1 0 0 0 1 0 0
........................................................CACCCGTAGAACCGACCTTGAGA........................................................................................... 23 2 1 1.00 1 0 0 0 0 1 0
........................................................CACCCGTAGAACCGGCCTTGCGT........................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
........................................................CACCCGTAGAACCAACCTTGC............................................................................................. 21 1 1 1.00 1 0 0 0 1 0 0
........................................................CACTCGTAGCACCGACCTTGCG............................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCTGTTT................................................... 25 2 1 1.00 1 1 0 0 0 0 0
........................................................CACCTGTAGAACCGACCTTGCGC........................................................................................... 23 2 1 1.00 1 0 0 1 0 0 0
........................................................CACCCGTAGAACCGAATTTGTG............................................................................................ 22 3 5 1.00 5 2 3 0 0 0 0
.........................................................CACCGTAGAACCGACCTTGCGT........................................................................................... 22 3 1 1.00 1 0 0 1 0 0 0
........................................................CACCCGTAGAACCGACCTTGCGTGAAC....................................................................................... 27 3 1 1.00 1 0 0 1 0 0 0
........................................................CACCCGTAGAACCGACGTTGCG............................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGATA................................................... 25 3 1 1.00 1 0 1 0 0 0 0
........................................................CACCCGTAGCACCGACCTTGCGG........................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0
........................................................CACCCGTGGAACCGACCTTGA............................................................................................. 21 2 1 1.00 1 0 0 0 0 0 1
.........................................................ACCCGTAGAACCGACCT................................................................................................ 17 0 1 1.00 1 0 0 0 0 1 0
........................................................CACTCGTAGAACCGAC.................................................................................................. 16 1 1 1.00 1 0 0 1 0 0 0
.........................................................ACCCGTAGAACCGACCTCGCGT........................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0
........................................................CACCCGCAGAACCGGCCTTGCG............................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
........................................................CACCCGTAGAATCGACCTTGCA............................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
.....................................ATTCCTGGGTCCTGGCACC.................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0
........................................................AAGCCGTAGAACCGACCTTGCGA........................................................................................... 23 3 1 1.00 1 0 1 0 0 0 0
........................................................CACCCGTAGAACCGACCTTGCATC.......................................................................................... 24 3 1 1.00 1 0 0 0 1 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGA......................................................... 19 1 1 1.00 1 0 1 0 0 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGCTT................................................... 25 2 1 1.00 1 0 0 0 1 0 0
........................................................CACACGTAGATCCGACCTTGCGA........................................................................................... 23 3 1 1.00 1 0 1 0 0 0 0
........................................................CACCCGCAGAACCCACCTTGCG............................................................................................ 22 2 1 1.00 1 0 0 0 0 0 1
..............................................................................................CAAGCTCGTGTCTGTGGATCCGA..................................................... 23 2 1 1.00 1 0 0 1 0 0 0
........................................................CACACGTAGAACCGACCGTGCG............................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0
........................................................CACCCGTAGAATCGACCTTG.............................................................................................. 20 1 1 1.00 1 0 1 0 0 0 0
........................................................CACTCGTAGAACCGACCTTGCTGGC......................................................................................... 25 3 1 1.00 1 0 0 1 0 0 0
.........................................................ACCCGTAGAACCGACCTTGT............................................................................................. 20 1 1 1.00 1 0 1 0 0 0 0
........................................................CACCTGTAGAACCGACCTTGCGG........................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCCGTCT................................................... 25 1 1 1.00 1 0 1 0 0 0 0
........................................................CACCCGTAGAACCGACCTTCCGA........................................................................................... 23 2 1 1.00 1 0 0 0 0 0 1
........................................................CACCCGTAGAACCGACCATGCGT........................................................................................... 23 2 1 1.00 1 0 0 1 0 0 0
........................................................CACCCGTAGAACCGACCTTGCGTAGA........................................................................................ 26 3 1 1.00 1 0 0 0 1 0 0
........................................................CACCCTTAGAACCGACCTTGC............................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................TAAGCTCGTGTCTGTGGGTCCGA..................................................... 23 2 1 1.00 1 0 0 1 0 0 0
..............................................................................................CAAGCTCGCGTCTGTGGCTCC....................................................... 21 2 1 1.00 1 0 0 0 0 0 1
............................................................CGTAGAACCGACCTTGCT............................................................................................ 18 1 1 1.00 1 0 0 0 0 1 0
........................................................CACCCGTAGAACCGACCTTGCGAAC......................................................................................... 25 3 1 1.00 1 0 0 0 0 0 1
.........................................................ACCCGTAGAACCGACCTTGCGTT.......................................................................................... 23 2 1 1.00 1 0 0 1 0 0 0
......................................................ATCACCCGTAGAACCGACCTTGC............................................................................................. 23 2 1 1.00 1 0 1 0 0 0 0
........................................................CACCCGTAGAACCGACCCTGCGT........................................................................................... 23 2 1 1.00 1 0 0 0 0 0 1
.......................................................ACACCCGTAGAACCGACCTTGCG............................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
........................................................CACCCGTAGAACTGACCTTGCGC........................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
..............................................................................................CAAGCTCGTGTCTGTGGGTCTG...................................................... 22 1 1 1.00 1 0 0 1 0 0 0

Anti-sense strand reads

GGACCCAAGGGACCCCTCCTCCCCCGGCCCCCGGGCCTAAGGACCCAGGACCGTGGGTGGGCATCTTGGCTGGAACGCCCCGGAAGCGGCGTGTGTTCGAGCACAGACACCCAGGCACAGCCCCCGAGAGGTAGCGCCGACCCCGGAGGGGCCGGGAGGGGCGGGCGGGA

**************************************..((.(((((((((..(((((((((..(((.(((((((........)))))....)).)))..)))))))))..))))))))).)).....*****************************************
Read size # Mismatch Hit Count Total Norm Total SRR139075

testes
........................................................................................................................................................CGGGAGGAGCGGGCGGGA 18 1 17 0.06 1 1

Generated: 09/01/2015 at 11:38 AM