ID:

ssc-mir-99a

Coordinate:

chr13:191558610-191558689 +

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-45.3 -45.1 -45.0

Sense Strand Reads

GATATTTACAAGAAATTCTGTACTATTAGGGAGCCCATGAGAGACGTTGCCCATTGGCATAAACCCGTAGATCCGATCTTGTGGTGAAGTGGACCGCACAAGCTCGCTTCTATGGGTCTGTGTCAGTGTGGTAATCTGACAAAATGCTATACACAATGCTGTTAAGTAGTATTTCAAACT

**********************************************(((((((((((((((.(((((((((..(((.((((((.((........)))))))).)))..))))))))).)))))))))).)))))..********************************************
Read size # Mismatch Hit Count Total Norm Total SRR139075

testes
SRR066809

ovary
SRR139076

testes
SRR066810

testes
SRR1274763

ovary
SRR1274764

testes
.............................................................AACCCGTAGATCCGATCTTGTG................................................................................................. 22 0 1 334777.00 334777 294400 13221 18754 4158 3681 563
.............................................................AACCCGTAGATCCGATCTTGT.................................................................................................. 21 0 1 236824.00 236824 193705 22365 15530 4202 778 244
.............................................................AACCCGTAGATCCGATCTTGTGA................................................................................................ 23 1 1 112681.00 112681 65029 37553 4725 5139 187 48
.............................................................AACCCGTAGATCCGATCTTGTGT................................................................................................ 23 1 1 46828.00 46828 31316 10683 1765 3025 36 3
.............................................................AACCCGTAGATCCGATCTTG................................................................................................... 20 0 1 21392.00 21392 17444 782 1781 137 1067 181
.............................................................AACCCGTAGATCCGATCTT.................................................................................................... 19 0 1 3336.00 3336 3045 110 141 19 19 2
............................................................AAACCCGTAGATCCGATCTTGT.................................................................................................. 22 0 1 3009.00 3009 2305 398 204 69 23 10
.............................................................AACCCGTAGATCCGATCTTGTA................................................................................................. 22 1 1 2608.00 2608 2167 261 149 15 10 6
.............................................................AACCCGTAGATCCGATC...................................................................................................... 17 0 1 2414.00 2414 2314 23 68 4 4 1
.............................................................AACCCGTAGATCCGA........................................................................................................ 15 0 2 2231.50 4463 4348 24 90 1 0 0
.............................................................AACCCGTAGATCCGCTCTTGTG................................................................................................. 22 1 1 1892.00 1892 1750 1 141 0 0 0
.............................................................AACCCGTAGATCCGCTCTTGT.................................................................................................. 21 1 1 1286.00 1286 1193 5 87 1 0 0
.............................................................AACCCGTAGATCCGATCTTGTGAA............................................................................................... 24 2 1 1246.00 1246 722 369 84 64 5 2
.............................................................AACCCGTAGATCCGATTTTGTG................................................................................................. 22 1 1 1058.00 1058 1009 10 37 1 1 0
.............................................................AACCCGTAGATCCGATCT..................................................................................................... 18 0 1 1052.00 1052 823 163 16 16 31 3
.............................................................AACCCGTAGATCCGATCTTGTT................................................................................................. 22 1 1 1003.00 1003 826 113 45 17 2 0
.............................................................AACCCGTAGATCTGATCTTGT.................................................................................................. 21 1 1 962.00 962 686 59 61 8 113 35
.............................................................AACCCGTAGATCCGGTCTTGTG................................................................................................. 22 1 1 882.00 882 845 7 27 2 1 0
.............................................................AACCCGTAGATCTGATCTTGTG................................................................................................. 22 1 1 880.00 880 787 28 43 6 15 1
.............................................................AACCCGTAGATCCGATCTTGA.................................................................................................. 21 1 1 857.00 857 401 370 55 19 9 3
.............................................................AACCCGTAGATTCGATCTTGTG................................................................................................. 22 1 1 824.00 824 773 8 43 0 0 0
.............................................................AACCCGTAGCTCCGATCTTGTG................................................................................................. 22 1 1 806.00 806 734 3 67 1 0 1
.............................................................AACCCGTAGCTCCGATCTTGT.................................................................................................. 21 1 1 730.00 730 668 7 53 2 0 0
.............................................................AACCCGTAGATTCGATCTTGT.................................................................................................. 21 1 1 716.00 716 656 18 41 0 1 0
.............................................................GACCCGTAGATCCGATCTTGTG................................................................................................. 22 1 1 700.00 700 427 177 21 31 33 11
..................................................................................................CAAGCTCGCTTCTATGGGTCTGT........................................................... 23 0 1 681.00 681 104 191 5 18 333 30
.................................................................CGTAGATCCGATCTTGT.................................................................................................. 17 0 1 672.00 672 5 3 0 0 498 166
.............................................................AACCCGTAGATCCGATCTTGCG................................................................................................. 22 1 1 629.00 629 514 13 95 5 1 1
.............................................................GACCCGTAGATCCGATCTTGT.................................................................................................. 21 1 1 609.00 609 312 242 17 29 5 4
.............................................................AACCCGTAGATCCGATTTTGT.................................................................................................. 21 1 2 599.00 1198 1091 24 75 8 0 0
.............................................................AACCCGTAGATCCGATCTTGTGG................................................................................................ 23 0 1 582.00 582 93 54 9 9 338 79
.............................................................AACCCGTAGATCCGCTCTTGTGA................................................................................................ 23 2 1 512.00 512 459 8 44 1 0 0
.............................................................AACCCGTAGATCCGGTCTTGT.................................................................................................. 21 1 1 466.00 466 439 5 21 1 0 0
.............................................................AACCCGTCGATCCGATCTTGTG................................................................................................. 22 1 1 463.00 463 397 2 61 2 1 0
.............................................................AACCCGTAGATCCGATCTTGTGGAAC............................................................................................. 26 3 1 444.00 444 390 1 53 0 0 0
.............................................................AACCCGCAGATCCGATCTTGTG................................................................................................. 22 1 1 436.00 436 385 1 49 1 0 0
.............................................................AACCCGTAGATCCGATCTTGTAA................................................................................................ 23 2 1 432.00 432 316 63 37 7 6 3
.............................................................AACCCGTCGATCCGATCTTGT.................................................................................................. 21 1 1 425.00 425 339 17 69 0 0 0
.............................................................AACCTGTAGATCCGATCTTGTG................................................................................................. 22 1 1 424.00 424 391 5 21 5 2 0
..............................................................ACCCGTAGATCCGATCTTGT.................................................................................................. 20 0 1 421.00 421 234 140 20 22 5 0
.............................................................AACCCGCAGATCCGATCTTGT.................................................................................................. 21 1 1 407.00 407 349 10 46 1 1 0
.............................................................CACCCGTAGATCCGATCTTGTG................................................................................................. 22 1 1 388.00 388 385 1 0 2 0 0
..............................................................ACCCGTAGATCCGATCTTGTG................................................................................................. 21 0 1 380.00 380 280 65 14 18 2 1
.............................................................AACCCGTAGATCCGATCTTTTG................................................................................................. 22 1 1 375.00 375 354 5 16 0 0 0
..............................................................ACCCGTAGATCCGATCTTGTGA................................................................................................ 22 1 1 368.00 368 103 217 12 35 1 0
.............................................................GACCCGTAGATCCGATCTTGTGA................................................................................................ 23 2 1 339.00 339 117 203 2 17 0 0
.............................................................AACCCGTAGATCCGATCTTGGG................................................................................................. 22 1 1 321.00 321 291 2 25 1 2 0
..................................................................................................CAAGCTCGCTTCTATGGGTCTG............................................................ 22 0 1 313.00 313 63 151 1 38 56 4
..................................................................GTAGATCCGATCTTGT.................................................................................................. 16 0 1 281.00 281 1 5 0 0 202 73
.............................................................AACCCGTAGATCCGGTCTTGTGA................................................................................................ 23 2 1 267.00 267 247 9 9 2 0 0
.................................................................CGTAGATCCGATCTTGTG................................................................................................. 18 0 1 256.00 256 9 0 0 0 199 48
.............................................................AACCCGTAGATCCGATCTTTT.................................................................................................. 21 1 1 254.00 254 235 5 13 1 0 0
.............................................................AACCCGTAGATCCGATCTTGC.................................................................................................. 21 1 1 241.00 241 198 11 31 1 0 0
.............................................................CACCCGTAGATCCGATCTTGT.................................................................................................. 21 1 1 240.00 240 237 2 1 0 0 0
.............................................................AACCCGTAGATCCGATCTTGTGC................................................................................................ 23 1 2 236.50 473 390 43 18 17 3 2
............................................................AAACCCGTAGATCCGATCTTG................................................................................................... 21 0 1 233.00 233 170 21 27 2 10 3
.............................................................AACCCGTAGATCCTATCTTGTG................................................................................................. 22 1 1 232.00 232 211 2 18 1 0 0
.............................................................AACCCGTAGATCCGCTCTTGTGT................................................................................................ 23 2 1 231.00 231 214 1 15 1 0 0
.............................................................AACTCGTAGATCCGATCTTGT.................................................................................................. 21 1 1 227.00 227 203 12 10 1 1 0
.............................................................AACCCGTAGATCCGATTTTGTGA................................................................................................ 23 2 1 226.00 226 196 16 14 0 0 0
.............................................................AACCCGTAGGTCCGATCTTGTG................................................................................................. 22 1 1 219.00 219 202 7 8 2 0 0
.............................................................AATCCGTAGATCCGATCTTGT.................................................................................................. 21 1 1 218.00 218 201 9 7 1 0 0
.............................................................AACTCGTAGATCCGATCTTGTG................................................................................................. 22 1 1 214.00 214 190 6 16 2 0 0
.............................................................AACCCGTGGATCCGATCTTGTG................................................................................................. 22 1 1 212.00 212 193 6 11 0 2 0
.............................................................AACCCGTAGATCCGATCTCGTG................................................................................................. 22 1 1 205.00 205 182 1 20 1 1 0
.............................................................AACCCGTAGATCCGATCTTGAG................................................................................................. 22 1 1 204.00 204 182 3 19 0 0 0
.............................................................AATCCGTAGATCCGATCTTGTG................................................................................................. 22 1 1 197.00 197 181 6 9 1 0 0
.............................................................AACCCGTAGACCCGATCTTGTG................................................................................................. 22 1 1 194.00 194 178 3 11 1 1 0
.............................................................AACCTGTAGATCCGATCTTGT.................................................................................................. 21 1 2 187.50 375 311 20 24 3 15 2
.............................................................AACCCGTAGATCTGATCTTGTGA................................................................................................ 23 2 1 187.00 187 100 63 4 4 10 6
.............................................................ACCCCGTAGATCCGATCTTGTG................................................................................................. 22 1 1 184.00 184 160 0 23 0 1 0
.............................................................AACCCGTAGATCCGATCCTGTG................................................................................................. 22 1 1 183.00 183 168 2 11 1 1 0
.............................................................AACCTGTAGATCCGATCTTGTGA................................................................................................ 23 2 1 182.00 182 106 52 5 15 4 0
.............................................................AACCCGTAGATCCTATCTTGT.................................................................................................. 21 1 1 182.00 182 160 3 19 0 0 0
.............................................................AACCCGTATATCCGATCTTGTG................................................................................................. 22 1 1 178.00 178 159 0 18 1 0 0
.............................................................GACCCGTAGATCCGATCTTGTGT................................................................................................ 23 2 1 174.00 174 52 108 0 14 0 0
................................................................CCGTAGATCCGATCTTGTG................................................................................................. 19 0 1 172.00 172 6 1 1 0 130 34
.............................................................AACCCGTGGATCCGATCTTGT.................................................................................................. 21 1 1 167.00 167 144 8 13 2 0 0
.............................................................AACCCGTAGATCCGATTTTGTGT................................................................................................ 23 2 1 165.00 165 149 8 8 0 0 0
.............................................................AACCCGTAGGTCCGATCTTGT.................................................................................................. 21 1 1 164.00 164 135 10 17 2 0 0
..................................................................................................CAAGCTCGCTTCTATGGGTCTGA........................................................... 23 1 1 162.00 162 96 50 7 5 4 0
............................................................CAACCCGTAGATCCGATCTTGTG................................................................................................. 23 1 1 160.00 160 125 17 10 8 0 0
.............................................................AGCCCGTAGATCCGATCTTGTG................................................................................................. 22 1 1 157.00 157 142 5 6 3 0 1
.............................................................AACCCGTAGATCCGATCTTGTGAT............................................................................................... 24 1 1 154.00 154 59 71 8 16 0 0
.............................................................AACCCGTATATCCGATCTTGT.................................................................................................. 21 1 1 154.00 154 136 1 17 0 0 0
.............................................................AACCCATAGATCCGATCTTGTG................................................................................................. 22 1 1 153.00 153 141 6 5 0 1 0
.............................................................AACCCGTAGATTCGATCTTGTGA................................................................................................ 23 2 1 152.00 152 107 37 5 2 1 0
.............................................................AACCCGTAGATCCGAACTTGTGG................................................................................................ 23 1 2 149.00 298 57 27 26 16 77 95
.............................................................AACCCGTAGATCTGATCTTGTGT................................................................................................ 23 2 1 149.00 149 75 50 7 13 4 0
.............................................................AACCCGTAGATCCGATCTTGTGTA............................................................................................... 24 2 1 148.00 148 133 6 6 2 1 0
.............................................................AACCCGTAGATCCGATCTTGG.................................................................................................. 21 1 1 145.00 145 135 1 9 0 0 0
.............................................................AACCCGTAGATCCAATCTTGTG................................................................................................. 22 1 1 141.00 141 126 5 7 3 0 0
..................................................................................................CAAGCTCGCTTCTATGGGTCT............................................................. 21 0 1 137.00 137 13 75 3 10 34 2
............................................................AAACCCGTAGATCCGATCTTGTG................................................................................................. 23 0 1 136.00 136 80 29 9 4 13 1
.............................................................AACCCTTAGATCCGATCTTGTG................................................................................................. 22 1 1 136.00 136 109 1 26 0 0 0
.............................................................AACCCGTAGACCCGATCTTGT.................................................................................................. 21 1 1 134.00 134 114 9 9 2 0 0
.............................................................AACCCGTAGCTCCGATCTTGTGA................................................................................................ 23 2 1 132.00 132 112 6 12 2 0 0
.............................................................AACCCGTAGATCCGATCTCGT.................................................................................................. 21 1 1 129.00 129 111 6 10 1 1 0
............................................................CAACCCGTAGATCCGATCTTGT.................................................................................................. 22 1 1 124.00 124 78 36 5 5 0 0
.............................................................AACCCGTAGATCCGATCCTGT.................................................................................................. 21 1 1 124.00 124 105 11 4 3 1 0
.............................................................AACCCATAGATCCGATCTTGT.................................................................................................. 21 1 1 124.00 124 106 7 10 1 0 0
.............................................................AACCCGTAGATCCGATCTTA................................................................................................... 20 1 1 124.00 124 110 6 7 1 0 0
.............................................................AACCCGTAGATCCGTTCTTGTG................................................................................................. 22 1 1 123.00 123 109 1 13 0 0 0
.............................................................AACCCGTAGATCCGGTCTTGTGT................................................................................................ 23 2 1 122.00 122 113 3 4 2 0 0
.............................................................AACCCGTAGATCCGACCTTGTG................................................................................................. 22 1 2 117.50 235 192 9 28 6 0 0
.............................................................AACCCGTAGATCCGATCTTGCGA................................................................................................ 23 2 1 116.00 116 95 7 12 2 0 0
..............................................................ACCCGTAGATCCGATCTTGTGT................................................................................................ 22 1 1 116.00 116 39 53 3 21 0 0
.............................................................AACCCGAAGATCCGATCTTGTG................................................................................................. 22 1 1 115.00 115 96 3 15 1 0 0
.............................................................AACCCGTAGATTCGATCTTGTGT................................................................................................ 23 2 1 114.00 114 105 4 3 2 0 0
.................................................................CGTAGATCCGATCTTGTGA................................................................................................ 19 1 1 113.00 113 2 5 0 1 73 32
.............................................................AACCCGTAGATCCGCTCTTG................................................................................................... 20 1 1 111.00 111 96 0 15 0 0 0
................................................................CCGTAGATCCGATCTTGT.................................................................................................. 18 0 1 110.00 110 9 2 0 1 61 37
.............................................................AACCCTTAGATCCGATCTTGT.................................................................................................. 21 1 1 108.00 108 91 1 16 0 0 0
.............................................................AACCCGTAGATCCGATCTTT................................................................................................... 20 1 1 107.00 107 99 3 5 0 0 0
.............................................................TACCCGTAGATCCGATCTTGTG................................................................................................. 22 1 1 107.00 107 89 7 9 2 0 0
.............................................................AACCCGTAGATCCGATTGTG................................................................................................... 20 2 3 107.00 321 312 0 8 1 0 0
.............................................................AACCCGTAGATCCGACCTTGT.................................................................................................. 21 1 2 101.50 203 157 19 25 2 0 0
.............................................................AGCCCGTAGATCCGATCTTGT.................................................................................................. 21 1 1 96.00 96 79 8 8 0 1 0
.............................................................AACCCGTAGATCCGATCTTGTTA................................................................................................ 23 2 1 94.00 94 83 3 7 1 0 0
.............................................................AACTCGTAGATCCGATCTTGTGA................................................................................................ 23 2 1 89.00 89 66 17 6 0 0 0
..................................................................................................CAAGCTCGCTTCTATGGGTC.............................................................. 20 0 1 86.00 86 3 52 0 3 25 3
.............................................................AACCCGTAGATCCGATCTTTTGA................................................................................................ 23 2 1 85.00 85 79 4 0 2 0 0
.............................................................AACCCGTAGATCCGATCTTCTG................................................................................................. 22 1 1 84.00 84 70 0 14 0 0 0
.............................................................AACCCGTAGCTCCGATCTTGTGT................................................................................................ 23 2 1 83.00 83 77 1 5 0 0 0
.............................................................ACCCCGTAGATCCGATCTTGT.................................................................................................. 21 1 1 82.00 82 66 1 15 0 0 0
.............................................................AACCCGTAGATTCGATCTTG................................................................................................... 20 1 1 81.00 81 75 0 4 0 2 0
.............................................................AACCCGTAGATCCAATCTTGT.................................................................................................. 21 1 1 81.00 81 68 10 3 0 0 0
.............................................................AACCCGAAGATCCGATCTTGT.................................................................................................. 21 1 1 81.00 81 75 1 5 0 0 0
.............................................................TACCCGTAGATCCGATCTTGT.................................................................................................. 21 1 1 81.00 81 66 10 4 1 0 0
.............................................................AACCCGTAGATCCGATCTTGGGA................................................................................................ 23 2 1 81.00 81 74 5 2 0 0 0
.............................................................AACCCGTAGATCCGATCTTGTGTT............................................................................................... 24 1 1 80.00 80 63 6 3 8 0 0
..................................................................GTAGATCCGATCTTGTG................................................................................................. 17 0 1 79.00 79 5 2 0 0 56 16
.............................................................AACCCGTAGATCCGATATTGTG................................................................................................. 22 1 1 77.00 77 74 0 3 0 0 0
.............................................................AACCCGTAGATCCGTTCTTGT.................................................................................................. 21 1 1 77.00 77 56 3 17 1 0 0
.............................................................AACCCGTAGATCCGATCTCGTGA................................................................................................ 23 2 1 75.00 75 46 18 10 1 0 0
.............................................................AACCCGCAGATCCGATCTTGTGA................................................................................................ 23 2 1 74.00 74 53 15 5 1 0 0
.............................................................AACCCCTAGATCCGATCTTGTG................................................................................................. 22 1 1 73.00 73 56 6 10 0 1 0
.............................................................AACCCGTCGATCCGATCTTGTGA................................................................................................ 23 2 1 72.00 72 60 6 6 0 0 0
.............................................................AACCCGTAGATCTGATCTTG................................................................................................... 20 1 1 71.00 71 45 5 2 0 17 2
.............................................................AACCCGTAGATCCGATCTTATG................................................................................................. 22 1 1 71.00 71 66 1 2 0 2 0
.............................................................AACCCGTAGATCCGATCTGGTG................................................................................................. 22 1 1 69.00 69 68 0 1 0 0 0
.............................................................AACCCGTGGATCCGATCTTGTGA................................................................................................ 23 2 1 69.00 69 48 19 1 1 0 0
.............................................................AATCCGTAGATCCGATCTTGTGA................................................................................................ 23 2 1 69.00 69 44 19 5 1 0 0
.............................................................AACCCGTAGATCCGATCCTGTGA................................................................................................ 23 2 1 69.00 69 43 24 2 0 0 0
.............................................................AACCCGTAGATCCGATCTAGTG................................................................................................. 22 1 1 67.00 67 59 2 5 1 0 0
.............................................................AACCCGTAGATCCGATCATGTG................................................................................................. 22 1 1 66.00 66 56 4 4 1 1 0
.............................................................AACCCGGAGATCCGATCTTGTG................................................................................................. 22 1 1 66.00 66 51 0 15 0 0 0
.............................................................AACCCGTAGATCCGATCTTGTGAAA.............................................................................................. 25 3 1 65.00 65 30 17 6 12 0 0
.............................................................AACCTGTAGATCCGATCTTGTGT................................................................................................ 23 2 1 64.00 64 50 10 2 1 1 0
.............................................................AACCCGGAGATCCGATCTTGT.................................................................................................. 21 1 1 64.00 64 53 2 9 0 0 0
.............................................................AACCCGTAGATCCGATTTTG................................................................................................... 20 1 2 63.00 126 108 2 15 0 1 0
.............................................................AACCCCTAGATCCGATCTTGT.................................................................................................. 21 1 1 62.00 62 53 3 5 1 0 0
.............................................................AACACGTAGATCCGATCTTGTG................................................................................................. 22 1 1 62.00 62 51 2 9 0 0 0
.............................................................CACCCGTAGATCCGATCTTGTGA................................................................................................ 23 2 1 62.00 62 59 3 0 0 0 0
.............................................................AACCCGTAAATCCGATCTTGTG................................................................................................. 22 1 1 61.00 61 48 2 9 2 0 0
.............................................................AACCCGTAGATCCGATCTTGTTT................................................................................................ 23 2 1 61.00 61 60 1 0 0 0 0
.............................................................AACCCGTAGATCCGATCTTCT.................................................................................................. 21 1 1 61.00 61 54 1 6 0 0 0
............................................................AAACCCGTAGATCCGATCTTGTGA................................................................................................ 24 1 1 60.00 60 12 46 0 1 1 0
.................................................................CGTAGATCCGATCTTG................................................................................................... 16 0 1 60.00 60 3 0 0 0 44 13
.............................................................AACCCGTTGATCCGATCTTGTG................................................................................................. 22 1 1 60.00 60 50 2 7 1 0 0
.............................................................AACCCGTAGATCCGATTGTGT.................................................................................................. 21 2 2 59.00 118 114 2 1 1 0 0
.............................................................AACCCGTAGTTCCGATCTTGTG................................................................................................. 22 1 1 58.00 58 51 1 6 0 0 0
.............................................................AACCCGTAGCTCCGATCTTG................................................................................................... 20 1 1 57.00 57 46 0 10 0 1 0
.............................................................AACCCGTAGATCCGATCA..................................................................................................... 18 1 1 57.00 57 44 10 1 0 2 0
.............................................................AACCCATAGATCCGATCTTGTGA................................................................................................ 23 2 1 57.00 57 27 26 1 3 0 0
.............................................................AACCCGTAGTTCCGATCTTGT.................................................................................................. 21 1 1 57.00 57 42 5 10 0 0 0
.............................................................AACCCGCAGATCCGATCTTGTGT................................................................................................ 23 2 1 56.00 56 49 1 4 2 0 0
.............................................................AACCCGTAGGTCCGATCTTGTGA................................................................................................ 23 2 1 56.00 56 38 15 3 0 0 0
.............................................................AACCCGTAGATCCGATATTGT.................................................................................................. 21 1 1 54.00 54 50 2 2 0 0 0
.............................................................AACCCGTAGACCCGATCTTGTGA................................................................................................ 23 2 1 54.00 54 42 9 1 2 0 0
.............................................................AACCCGTAGATTTGATCTTGTG................................................................................................. 22 2 1 54.00 54 53 0 1 0 0 0
..................................................................................................CAAGCTCGCTTCTATGGGTCTGTT.......................................................... 24 1 1 52.00 52 8 12 0 5 24 3
.............................................................AACCCGTAGAACCGATCTTGTG................................................................................................. 22 1 1 51.00 51 44 3 4 0 0 0
.............................................................AACCCGTAGATCGGATCTTGTG................................................................................................. 22 1 1 51.00 51 44 0 7 0 0 0
.............................................................AACCCGTAGATCCGATCTTGCGT................................................................................................ 23 2 1 51.00 51 45 3 2 1 0 0
.............................................................AACCCGTAGATCCGGTCTTG................................................................................................... 20 1 1 50.00 50 46 0 3 0 1 0
.............................................................AACCCGTCGATCCGATCTTGTGT................................................................................................ 23 2 1 50.00 50 44 1 5 0 0 0
.............................................................AACCCGTACATCCGATCTTGTG................................................................................................. 22 1 1 50.00 50 40 5 5 0 0 0
.............................................................TACCCGTAGATCCGATCTTGTGA................................................................................................ 23 2 1 49.00 49 21 27 0 1 0 0
............................................................CAACCCGTAGATCCGATCTTGTGA................................................................................................ 24 2 1 48.00 48 16 31 0 1 0 0
.............................................................AACCCGTTGATCCGATCTTGT.................................................................................................. 21 1 1 48.00 48 36 1 11 0 0 0
..................................................................GTAGATCCGATCTTGTGA................................................................................................ 18 1 1 48.00 48 1 4 0 3 30 10
.............................................................AACCCGTAGATTTGATCTTGT.................................................................................................. 21 2 1 48.00 48 46 0 2 0 0 0
.............................................................AACCCGTAGATCCGATCTTGAGA................................................................................................ 23 2 1 46.00 46 25 13 5 3 0 0
.............................................................AACCCGTAGATCCGATGT..................................................................................................... 18 1 1 46.00 46 43 0 3 0 0 0
.............................................................AACCCGTAGAACCGATCTTGT.................................................................................................. 21 1 1 46.00 46 39 4 3 0 0 0
.............................................................AACCCGTAAATCCGATCTTGT.................................................................................................. 21 1 1 46.00 46 39 4 1 2 0 0
.............................................................AACCCGTAGATCCGATCTTGTGAGA.............................................................................................. 25 3 1 46.00 46 37 3 6 0 0 0
.............................................................AACCCGTAGAGCCGATCTTGTG................................................................................................. 22 1 1 45.00 45 44 0 0 0 1 0
.............................................................AACCCGTAGATCCGATCTTAT.................................................................................................. 21 1 1 44.00 44 38 2 3 0 1 0
.............................................................AACCCGTAGATCCGATCTTGTAT................................................................................................ 23 2 1 44.00 44 32 8 3 1 0 0
.............................................................AACCCGTAGATCAGATCTTGT.................................................................................................. 21 1 1 44.00 44 36 2 5 1 0 0
.............................................................AACCCGTAGATCCGAT....................................................................................................... 16 0 1 43.00 43 38 5 0 0 0 0
.............................................................AACCCGTAGATCCCATCTTGTG................................................................................................. 22 1 1 42.00 42 35 0 7 0 0 0
.............................................................AACCCGTAGATCCGATCTTGTGAAC.............................................................................................. 25 3 1 42.00 42 39 0 3 0 0 0
.............................................................GACCCGTAGATCCGATCTTG................................................................................................... 20 1 1 42.00 42 16 13 1 2 7 3
.............................................................AACCCGTAGATCCGATCATGT.................................................................................................. 21 1 1 41.00 41 30 5 5 1 0 0
.............................................................AACCCGTAGATCAGATCTTGTG................................................................................................. 22 1 1 41.00 41 37 1 2 1 0 0
.............................................................AACCCGTAGATACGATCTTGT.................................................................................................. 21 1 1 41.00 41 38 2 0 1 0 0
.............................................................AGCCCGTAGATCCGATCTTGTGA................................................................................................ 23 2 1 41.00 41 21 17 3 0 0 0
.............................................................AACCCGTAGATGCGATCTTGTG................................................................................................. 22 1 1 40.00 40 37 2 1 0 0 0
.............................................................AACCCGTAGATGCGATCTTGT.................................................................................................. 21 1 1 40.00 40 37 2 1 0 0 0
.............................................................ACCCCGTAGATCCGATCTTGTGA................................................................................................ 23 2 1 40.00 40 36 1 3 0 0 0
.............................................................AACCCGTAGATCCAATCTTGTGA................................................................................................ 23 2 1 40.00 40 22 15 1 2 0 0
.............................................................AACCCGTAGATCCGATCTGT................................................................................................... 20 2 3 39.67 119 113 0 6 0 0 0
.............................................................CACCCGTAGATCCGATCTTGTGT................................................................................................ 23 2 1 39.00 39 38 1 0 0 0 0
.............................................................AACCCGTAGATCCGATCTTGAA................................................................................................. 22 2 1 39.00 39 12 26 0 0 1 0
.............................................................AACCCGTAGATCCGATCTCTTG................................................................................................. 22 2 1 39.00 39 37 0 2 0 0 0
.............................................................AACCCGTAGATACGATCTTGTG................................................................................................. 22 1 1 39.00 39 37 1 1 0 0 0
................................................................CCGTAGATCCGATCTTGTGA................................................................................................ 20 1 1 39.00 39 6 16 0 2 11 4
.............................................................AACCCGTAGATCCGACCTTGTGA................................................................................................ 23 2 2 38.50 77 42 21 11 3 0 0
.............................................................AACCCGCAGATCCGATCTTG................................................................................................... 20 1 1 38.00 38 31 0 7 0 0 0
.............................................................AACACGTAGATCCGATCTTGT.................................................................................................. 21 1 1 38.00 38 26 6 5 1 0 0
.............................................................AACCCGTAGATCCGATCTTGTC................................................................................................. 22 1 1 38.00 38 31 3 3 0 1 0
.............................................................AACCCGTAGATCCCATCTTGT.................................................................................................. 21 1 1 38.00 38 32 0 6 0 0 0
.............................................................AACTCGTAGATCCGATCTTGTGT................................................................................................ 23 2 1 37.00 37 30 6 1 0 0 0
.............................................................AACCCGTATATCCGATCTTGTGA................................................................................................ 23 2 1 37.00 37 25 9 3 0 0 0
.............................................................AACCCGTAGATCCGATCTGGT.................................................................................................. 21 1 1 37.00 37 36 1 0 0 0 0
.............................................................AACCCGTAGATCCGATCTTGTGAC............................................................................................... 24 2 1 36.00 36 20 13 1 2 0 0
.............................................................AACGCGTAGATCCGATCTTGTG................................................................................................. 22 1 1 36.00 36 33 1 2 0 0 0
.............................................................AACCCGTAGATCCGATTGT.................................................................................................... 19 2 4 35.25 141 133 0 8 0 0 0
.............................................................AACCCGTACATCCGATCTTGT.................................................................................................. 21 1 1 35.00 35 23 6 6 0 0 0
.............................................................AACCCGTAGATCCGATCTGGTGA................................................................................................ 23 2 1 35.00 35 32 2 1 0 0 0
.............................................................ATCCCGTAGATCCGATCTTGTG................................................................................................. 22 1 1 34.00 34 29 2 3 0 0 0
.............................................................AACCCGTAGATCCGATCTTATGA................................................................................................ 23 2 1 34.00 34 15 16 3 0 0 0
.............................................................AACCCGTAGATCCTATCTTGTGA................................................................................................ 23 2 1 34.00 34 25 2 7 0 0 0
..............................................................ACCCGTAGATCCGATCTTG................................................................................................... 19 0 1 33.00 33 22 3 3 1 3 1
.............................................................AACCCGTAGATCGGATCTTGT.................................................................................................. 21 1 1 32.00 32 25 2 3 2 0 0
.............................................................AACCCATAGATCCGATCTTGTGT................................................................................................ 23 2 1 32.00 32 20 7 0 5 0 0
.............................................................AATCCGTAGATCCGATCTTGTGT................................................................................................ 23 2 1 31.00 31 24 6 1 0 0 0
.............................................................AACCCGTAGATCCGATCTTGTGGAC.............................................................................................. 25 2 1 30.00 30 30 0 0 0 0 0
.............................................................AACCCGTAGATCCGTTCTTGTGA................................................................................................ 23 2 1 30.00 30 22 2 6 0 0 0
..........................................................ATTAACCCGTAGATCCGATCTTGTGA................................................................................................ 26 2 1 30.00 30 0 28 0 2 0 0
.............................................................AAACCGTAGATCCGATCTTGT.................................................................................................. 21 1 1 29.00 29 26 2 1 0 0 0
.............................................................AACCCGTAGATCCGATCTTTTGT................................................................................................ 23 2 1 29.00 29 29 0 0 0 0 0
.............................................................AACCGGTAGATCCGATCTTGTG................................................................................................. 22 1 1 29.00 29 26 1 2 0 0 0
.............................................................AACCCGTCGATCCGATCTTG................................................................................................... 20 1 1 28.00 28 21 1 6 0 0 0
.............................................................AACCCGTAGATCCGATGTTGTG................................................................................................. 22 1 1 28.00 28 26 1 1 0 0 0
.............................................................AACCCGTAGATCCGATCTTGTGGAGC............................................................................................. 26 2 1 28.00 28 26 0 2 0 0 0
.............................................................AACCCGTAGATCCGATCTTTG.................................................................................................. 21 2 1 28.00 28 26 1 1 0 0 0
.............................................................AACCCGTAGATCCGACCTTGTGT................................................................................................ 23 2 2 27.50 55 23 15 10 7 0 0
.............................................................AACCCTTAGATCCGATCTTGTGA................................................................................................ 23 2 1 27.00 27 17 7 3 0 0 0
.............................................................AACCCGTAGACCCGATCTTGTGT................................................................................................ 23 2 1 27.00 27 22 3 1 1 0 0
............................................................CAACCCGTAGATCCGATCTTGTGT................................................................................................ 24 2 1 27.00 27 16 9 1 1 0 0
.............................................................AACCCGTAGATCCGATCTG.................................................................................................... 19 1 1 26.00 26 23 1 0 0 2 0
.............................................................ATCCCGTAGATCCGATCTTGT.................................................................................................. 21 1 1 26.00 26 22 0 4 0 0 0
.............................................................AAACCGTAGATCCGATCTTGTG................................................................................................. 22 1 1 26.00 26 26 0 0 0 0 0
.............................................................AACCCGTAGATCCGATTTGT................................................................................................... 20 3 20 25.40 508 477 3 26 2 0 0
............................................................AAACCCGTAGATTCGATCTTGT.................................................................................................. 22 1 1 25.00 25 21 1 3 0 0 0
.............................................................AACGCGTAGATCCGATCTTGT.................................................................................................. 21 1 1 25.00 25 25 0 0 0 0 0
.............................................................AACCCGTAGATCCGATCGTGTG................................................................................................. 22 1 1 25.00 25 22 0 2 1 0 0
.............................................................AACCCGTAGATCCGATCGT.................................................................................................... 19 1 1 25.00 25 24 0 1 0 0 0
..............................................................AACCGTAGATCCGATCTTGT.................................................................................................. 20 1 1 24.00 24 20 1 3 0 0 0
.............................................................AACCCGTAGATCCGATCTA.................................................................................................... 19 1 1 24.00 24 10 12 2 0 0 0
.............................................................AACCCGTAGATCCGATCCTGTGT................................................................................................ 23 2 1 24.00 24 17 2 3 2 0 0
.............................................................AACCCCTAGATCCGATCTTGTGA................................................................................................ 23 2 1 24.00 24 19 4 1 0 0 0
.............................................................AACCCGTAGATCCGATCTTGTGGGAC............................................................................................. 26 3 1 24.00 24 22 0 2 0 0 0
............................................................AAACCCGTAGATCTGATCTTGT.................................................................................................. 22 1 1 24.00 24 18 1 0 0 4 1
.............................................................AACTTGTAGATCCGATCTTGTG................................................................................................. 22 2 1 23.00 23 23 0 0 0 0 0
.............................................................AACCCGTAGAGCCGATCTTGT.................................................................................................. 21 1 1 23.00 23 22 0 1 0 0 0
.............................................................AACCCGTAGATCCGATCTTGGGT................................................................................................ 23 2 1 23.00 23 21 1 1 0 0 0
.............................................................AGCCCGTAGATCCGATCTTGTGT................................................................................................ 23 2 1 22.00 22 15 4 1 2 0 0
................................................................CCGTAGATCCGATCTTG................................................................................................... 17 0 1 22.00 22 1 1 0 0 17 3
...................................................................................................AAGCTCGCTTCTATGGGTCTGT........................................................... 22 0 1 21.00 21 7 9 0 0 5 0
.............................................................AACCCGTAGATCCGATGTTGT.................................................................................................. 21 1 1 21.00 21 20 0 1 0 0 0
............................................................AAACCCGTAGATCCGATCTTGTA................................................................................................. 23 1 1 21.00 21 13 6 0 0 2 0
.............................................................AACCCGTAGATTCGATCTT.................................................................................................... 19 1 1 21.00 21 21 0 0 0 0 0
.............................................................AACCAGTAGATCCGATCTTGT.................................................................................................. 21 1 1 21.00 21 17 1 1 2 0 0
.............................................................CACCCGTAGATCCGATCTTG................................................................................................... 20 1 1 21.00 21 21 0 0 0 0 0
.............................................................AACCCGTAGATCCGATCTCGTGT................................................................................................ 23 2 1 21.00 21 12 6 2 1 0 0
.............................................................AACCCGTAGATCCGAGCTTGTG................................................................................................. 22 1 2 20.50 41 27 4 4 5 1 0
.............................................................AACCTGTAGATCCGATCTTG................................................................................................... 20 1 2 20.50 41 35 0 4 0 2 0
.............................................................AACCCGTAGATCCGATCATGTGA................................................................................................ 23 2 1 20.00 20 12 4 3 1 0 0
.............................................................TACCCGTAGATCCGATCTTGTGT................................................................................................ 23 2 1 20.00 20 9 8 1 2 0 0
.............................................................AACTCGTAGATCCGATCTTG................................................................................................... 20 1 1 20.00 20 19 0 1 0 0 0
.............................................................AACCCGTAAATCCGATCTTGTGA................................................................................................ 23 2 1 20.00 20 14 6 0 0 0 0
.................................................................CGTAGATCCGATCTTGTGT................................................................................................ 19 1 1 20.00 20 1 1 0 0 15 3
..............................................................AACCGTAGATCCGATCTTGTG................................................................................................. 21 1 1 20.00 20 19 0 1 0 0 0
.............................................................AACCCGTAGATCCGATCTC.................................................................................................... 19 1 1 20.00 20 18 0 2 0 0 0
.............................................................AACCCGTGGATCCGATCTTGTGT................................................................................................ 23 2 1 19.00 19 16 1 1 1 0 0
.............................................................AACCCGTAGATCCTATCTTGTGT................................................................................................ 23 2 1 19.00 19 18 0 1 0 0 0
.............................................................AACCCGTATATCCGATCTTGTGT................................................................................................ 23 2 1 19.00 19 16 1 2 0 0 0
.............................................................AACCCGTAGATCCGATCTAGT.................................................................................................. 21 1 1 19.00 19 17 2 0 0 0 0
.............................................................AACCCGTTGATCCGATCTTGTGA................................................................................................ 23 2 1 19.00 19 10 8 1 0 0 0
............................................................CAACCCGTAGATCCGATCTTG................................................................................................... 21 1 1 19.00 19 18 0 1 0 0 0
.............................................................AACCCGTAGATCCGATCTGGTGT................................................................................................ 23 2 1 18.00 18 17 0 1 0 0 0
............................................................AGACCCGTAGATCCGATCTTGT.................................................................................................. 22 1 1 18.00 18 10 6 0 1 1 0
.............................................................AACCCGTAGGTCCGATCTTGTGT................................................................................................ 23 2 1 18.00 18 15 2 0 1 0 0
.............................................................AACCCGTAGGTCCGATCTTG................................................................................................... 20 1 1 18.00 18 14 1 2 1 0 0
.............................................................AACCCGTAGATCCGATTGTGA.................................................................................................. 21 3 6 17.67 106 96 5 5 0 0 0
.............................................................AACCCGTAGATCCGAGCTTGT.................................................................................................. 21 1 2 17.50 35 24 5 4 2 0 0
.............................................................ACCCCGTAGATCCGATCTTGTGT................................................................................................ 23 2 1 17.00 17 14 0 3 0 0 0
............................................................AAACCCGTAGATCCGATCTTGTGT................................................................................................ 24 1 1 17.00 17 13 1 0 3 0 0
.............................................................AACCAGTAGATCCGATCTTGTG................................................................................................. 22 1 1 17.00 17 16 0 1 0 0 0
.............................................................AACCAGTAGATCCGATCTTGTGA................................................................................................ 23 2 1 17.00 17 12 3 0 2 0 0
.............................................................AACCCGAAGATCCGATCTTGTGA................................................................................................ 23 2 1 17.00 17 12 5 0 0 0 0
.............................................................AACCCGTAGATCCGCTCTTGTA................................................................................................. 22 2 1 16.00 16 15 0 1 0 0 0
.............................................................AAACCGTAGATCCGATCTTGTGA................................................................................................ 23 2 1 16.00 16 9 3 2 2 0 0
.............................................................AACCCGTAGATCCGATCGTG................................................................................................... 20 1 1 16.00 16 15 0 1 0 0 0
.............................................................AACCCGTAGATCCGATCTTGTGAGC.............................................................................................. 25 3 1 16.00 16 15 0 1 0 0 0
.............................................................AACCCGTAGATCCGCTC...................................................................................................... 17 1 1 16.00 16 16 0 0 0 0 0

Anti-sense strand reads

CTATAAATGTTCTTTAAGACATGATAATCCCTCGGGTACTCTCTGCAACGGGTAACCGTATTTGGGCATCTAGGCTAGAACACCACTTCACCTGGCGTGTTCGAGCGAAGATACCCAGACACAGTCACACCATTAGACTGTTTTACGATATGTGTTACGACAATTCATCATAAAGTTTGA

********************************************(((((((((((((((.(((((((((..(((.((((((.((........)))))))).)))..))))))))).)))))))))).)))))..**********************************************
Read size # Mismatch Hit Count Total Norm Total SRR139076

testes
..............................................................................................................................ACACCATTAGACGGTTTTACT................................. 21 2 2 0.50 1 1

Generated: 09/01/2015 at 11:26 AM