ID:

ssc-mir-9851

Coordinate:

chr14:138325833-138325908 -

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]

Legend:

mature

star

mismatch in read

Predicted structure

-59.2

Sense Strand Reads

TGACACAGGCAGTAGCTCCAGCAACGTGATGCCAGCAGCAGCAGAGGCGGTGAGCCCGGCGCTGGCAGTGTTGGTGGCACTCGTGTGGTGGCAGTGGCACCAGCACTGGCGGTGGCGGTCGCACCAGCACCGGCAGCGCCTGTACCAGCAGGAGATGCCACTGCACCTTTGAAGTG *********************************..((.((....((((((...(((.(((((.(((((((((((.((((.((......)))))).))))))))))).))))).)))...)))).))....)).))....*********************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR1274763 ovary	SRR139075 testes	SRR1274764 testes	SRR139076 testes
..............................................................................................TGGCACCAGCACTGGCGGTGG.............................................................	21	0	1	4.00	4	2	0	2	0
..............................................................................................TGGCACCAGCACTGGCGGTGGC............................................................	22	0	1	2.00	2	1	0	1	0
..............................................................................................TGGCACCAGCACTGGCGGTGGCT...........................................................	23	1	1	1.00	1	0	1	0	0
..............................................................................................TGGCACCAGCACTGGCGAT...............................................................	19	1	1	1.00	1	0	1	0	0
..............................................................................................TGGCACCGGCACTGGCGGTGG.............................................................	21	1	1	1.00	1	0	0	1	0
..............................................................................................TGGCACCAGCACTGGCGGA...............................................................	19	1	1	1.00	1	0	1	0	0
..............................................................................................TGGCACCAGCACTGGCGGTGGAT...........................................................	23	2	1	1.00	1	1	0	0	0
..............................................................................................TGGCACCAGCACTGGCGGTGGT............................................................	22	1	1	1.00	1	1	0	0	0
..............................................................................................TGGCACCAGCACTGGCGGTGGCA...........................................................	23	1	1	1.00	1	0	1	0	0
..............................................................................................TGGCACCAGCACTGGCGGTGGCTT..........................................................	24	2	1	1.00	1	1	0	0	0
..............................................................................................TGGCACCAGCACTGGCGGAA..............................................................	20	2	6	0.33	2	0	1	0	1
....................................CGCAGCAGAGGCGGTGA...........................................................................................................................	17	1	19	0.05	1	0	1	0	0

Anti-sense strand reads

ACTGTGTCCGTCATCGAGGTCGTTGCACTACGGTCGTCGTCGTCTCCGCCACTCGGGCCGCGACCGTCACAACCACCGTGAGCACACCACCGTCACCGTGGTCGTGACCGCCACCGCCAGCGTGGTCGTGGCCGTCGCGGACATGGTCGTCCTCTACGGTGACGTGGAAACTTCAC *********************************..((.((....((((((...(((.(((((.(((((((((((.((((.((......)))))).))))))))))).))))).)))...)))).))....)).))....*********************************	Read size	# Mismatch	Hit Count	Total Norm	Total

Generated: 09/01/2015 at 11:27 AM