ID:

ssc-mir-9834

Coordinate:

chr5:10378183-10378271 -

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

Sense Strand Reads

CCCCAGCCCCACCCTGAGAGGACAGAAGGCACAGCACAGTCAGAAAGGAGGGCGTGTGTGTACAGTTAGATCGGGATGGTCACGTGTTCTGCATGGGAGCATGGAAACTCACTTGGGCTTGATACTGCCCATACTTTCTTTAAATAAGCTACCATTCCTACCTGACAGTGAGAAAATTAACTTTAGTCC

***********************************......((((((..(((((.((((....(((....(((((.((((..((((((((.....))))))))...)).))))))))))..)))))))))...))))))...............***********************************
Read size # Mismatch Hit Count Total Norm Total SRR066810

testes
.......................................................GTGTGTGCTGTTAGATCGG................................................................................................................... 19 2 8 0.13 1 1

Anti-sense strand reads

GGGGTCGGGGTGGGACTCTCCTGTCTTCCGTGTCGTGTCAGTCTTTCCTCCCGCACACACATGTCAATCTAGCCCTACCAGTGCACAAGACGTACCCTCGTACCTTTGAGTGAACCCGAACTATGACGGGTATGAAAGAAATTTATTCGATGGTAAGGATGGACTGTCACTCTTTTAATTGAAATCAGG

***********************************......((((((..(((((.((((....(((....(((((.((((..((((((((.....))))))))...)).))))))))))..)))))))))...))))))...............***********************************
Read size # Mismatch Hit Count Total Norm Total SRR066810

testes
................................................TCCCGCACACACATGTCAATCTAGCCCT................................................................................................................. 28 0 1 1.00 1 1

Generated: 09/01/2015 at 11:36 AM