ID:

ssc-mir-9819

Coordinate:

chr5:8348858-8348955 -

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

Sense Strand Reads

CCAGGATCCCGAGATTCGGGTGACTGCGGGGGCGGCGTGGCGCTTGCCTTTCTTTAGAGGGAGCTCGATCGTCCGGATGCTCAGCCTGGGACGTCCCCCCGCCGCCCCGGGGCCAGAGCAGAGCTGGGGGCTGCAGCCTAGCAGGGAAGGCGCGGCCCTGGCTTCACCCTCAGGATGGCTGTCCGCAGCAGCTGGGGG

***********************************((.((((.(((.((((((....))))))..))).))))))..(((((..((((((.((.........)).))))))....))))).(((..((((((((.((((........)))))))))))).)))***********************************
Read size # Mismatch Hit Count Total Norm Total SRR139075

testes
....................................................................................................................................................................CACCCTCAGGATGGCTGTCCGC............ 22 0 1 1.00 1 1
...............................................................................................................................................GGGAAGGCGCGGCCCTGGCA................................... 20 1 2 0.50 1 1

Anti-sense strand reads

GGTCCTAGGGCTCTAAGCCCACTGACGCCCCCGCCGCACCGCGAACGGAAAGAAATCTCCCTCGAGCTAGCAGGCCTACGAGTCGGACCCTGCAGGGGGGCGGCGGGGCCCCGGTCTCGTCTCGACCCCCGACGTCGGATCGTCCCTTCCGCGCCGGGACCGAAGTGGGAGTCCTACCGACAGGCGTCGTCGACCCCC

***********************************((.((((.(((.((((((....))))))..))).))))))..(((((..((((((.((.........)).))))))....))))).(((..((((((((.((((........)))))))))))).)))***********************************
Read size # Mismatch Hit Count Total Norm Total SRR066809

ovary
...........................................................................................................................................................GGGACCGAAGTGGGA............................ 15 0 20 0.10 2 2

Generated: 09/01/2015 at 11:36 AM