ID:

ssc-mir-9817

Coordinate:

chr3:1180174-1180244 +

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-29.0 -28.5 -28.3 -28.2

Sense Strand Reads

GCCGTTCCCTCCTGACCTCTGGCCCTGGGACCCCTGGTCTGTTCTCTGCCCCGTTACGGCCTTTTCCAAAATGTCGTCGGAACAGAAACACACGGCGTGTGCTGGCAGGGGTGTCGAGGGTGAGCTgtgcgtgcatgcatatgagtgtgagtgtgtgcacctgcgtgtaca

***********************************.((..((((...((((((.....((((((.(((..(((.(((((.............))))))))..))).))))))..)).)))))))).........))***********************************
Read size # Mismatch Hit Count Total Norm Total SRR139076

testes
................................................................TCCAAAATGTCGTCGGAACAGAAAC.................................................................................. 25 0 1 1.00 1 1

Anti-sense strand reads

CGGCAAGGGAGGACTGGAGACCGGGACCCTGGGGACCAGACAAGAGACGGGGCAATGCCGGAAAAGGTTTTACAGCAGCCTTGTCTTTGTGTGCCGCACACGACCGTCCCCACAGCTCCCACTCGAgtgGgtgGTtgGTtTtgTgtgtgTgtgtgtgGTGGtgGgtgtTGT

***********************************.((..((((...((((((.....((((((.(((..(((.(((((.............))))))))..))).))))))..)).)))))))).........))***********************************
Read size # Mismatch Hit Count Total Norm Total SRR066810

testes
SRR066809

ovary
.................................................GGGCAATGCTGGAAA........................................................................................................... 15 1 12 0.17 2 1 1
...................ACCGGGACCTTGGGAACCAGAAA................................................................................................................................. 23 3 9 0.11 1 1 0

Generated: 09/01/2015 at 11:33 AM