ID:

ssc-mir-9811

 Coordinate:

chr3:84528167-84528258 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

Sense Strand Reads

CTTGTTCTCCGCTGAGGCCGCGCCGCTGTGCAGACATGGCCAAGTGGGGCCAGGGGGACCCGCGCTGGATCGTGGAGGAGCGGGAGGACGGGACCAACGTGAACAACTGGCACTGGTGCGGCCGGGCGGGGGCCAGGGCTGCGGTTTCTGGGCCTCCTCCCTCGGGAgccgccgggcggggcggggcggggg

***********************************(((((((.(((((.((....)).)))))..))).))))(((((..((((((..(((..(((..((.....)))))..))).(((((((.(((....)))..))))))).))))))..)))))*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR066809

ovary		 SRR066810

testes
....................................................................ATCGTGGAGGAGCGGGAGGACGGGTT.................................................................................................. 26 2 1 1.00 1 1 0
.............................................................................................................GCACTGGTCCGGCCGGG.................................................................. 17 1 2 0.50 1 0 1
...........................................................................................................................................................................CCGGGCGGGGCGGGGCTGGGG 21 1 11 0.09 1 0 1
...............................................................................................................ACTGGTCCGGCCGGG.................................................................. 15 1 20 0.05 1 0 1

Anti-sense strand reads

GAACAAGAGGCGACTCCGGCGCGGCGACACGTCTGTACCGGTTCACCCCGGTCCCCCTGGGCGCGACCTAGCACCTCCTCGCCCTCCTGCCCTGGTTGCACTTGTTGACCGTGACCACGCCGGCCCGCCCCCGGTCCCGACGCCAAAGACCCGGAGGAGGGAGCCCTgGGgGGgggGggggGggggGggggg

***********************************(((((((.(((((.((....)).)))))..))).))))(((((..((((((..(((..(((..((.....)))))..))).(((((((.(((....)))..))))))).))))))..)))))*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:34 AM