ID:

ssc-mir-9784-2

 Coordinate:

chr12:9188742-9188820 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-40.0
mature

  1. ssc-mir-9784-1  chr12:9111197-9111220 +
  2. ssc-mir-9784-2  chr12:9188787-9188810 -
star

Sense Strand Reads

TGGTGTGtGGGTGTGTTgTttTTTgttTTGgAGAAAATTTAGCTTTGCTCAGTAGCTGGGAACGGGTTGTCTCAGTTGTCAGCGTGAAGGTTATTCTGCTGAAGCCGACCCAACCCCCACCCTGTTCTGGGATGAGACTGGCTAACAGCTGGTGACTGGAGCAAGGGAAGAAGATATTA

***********************************...(((((((..(((((.(((.(((...((((((..((.(((.((((((.(((.....)))))))))))).))..))))))...))).))))))))..))).))))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR139076

testes
............................................................AACGGGTTGTCTCAGTTGTCAGCG............................................................................................... 24 0 2 0.50 1 1

Anti-sense strand reads

ACCACACtCCCACACAAgAttAAAgttAACgTCTTTTAAATCGAAACGAGTCATCGACCCTTGCCCAACAGAGTCAACAGTCGCACTTCCAATAAGACGACTTCGGCTGGGTTGGGGGTGGGACAAGACCCTACTCTGACCGATTGTCGACCACTGACCTCGTTCCCTTCTTCTATAAT

***********************************...(((((((..(((((.(((.(((...((((((..((.(((.((((((.(((.....)))))))))))).))..))))))...))).))))))))..))).))))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:24 AM