ID:

ssc-mir-95

 Coordinate:

chr8:4277238-4277318 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-44.2 -44.1 -43.6 -43.5

Sense Strand Reads

CCCCTGGGCATCCATCTGCAGCGCCCCAGGAAGGCAGGACTGTGATGCTTAacacagtgggcgctcaataaatgtttgttgaatTGAGATGCGTTAAattcaacgggtatttattgagcacccactctgtgccagacgctgagtggggcgccgagggggagacggagaagacacgtgcagc

***********************************....((......((..(((.((((((.(((((((((((((((((((((((...........))))))))))))))))))))))).)))))).)))...)).........))*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR066809

ovary		 SRR139075

testes		 SRR139076

testes		 SRR1274764

testes		 SRR066810

testes		 SRR1274763

ovary
..................................................................................................TTCAACGGGTATTTATTGAGC.............................................................. 21 0 1 499.00 499 329 33 21 61 38 17
..................................................................................................TTCAACGGGTATTTATTGAGCA............................................................. 22 0 1 142.00 142 11 106 16 4 2 3
..................................................................................................TTCAACGGGTATTTATTGAG............................................................... 20 0 1 113.00 113 0 91 22 0 0 0
..................................................................................................TTCAACGGGTATTTATTGAGCAA............................................................ 23 1 1 38.00 38 2 22 11 2 1 0
.....................................................................................................AACGGGTATTTATTGAGCA............................................................. 19 0 1 17.00 17 0 15 2 0 0 0
..................................................................................................TTCAACGGGTATTTATTGA................................................................ 19 0 2 10.50 21 0 20 1 0 0 0
..................................................................................................TTCAACGGGTATTTATTG................................................................. 18 0 2 5.50 11 0 7 4 0 0 0
.....................................................................................................AACGGGTATTTATTGAG............................................................... 17 0 3 5.00 15 0 14 1 0 0 0
...................................................................................................TCAACGGGTATTTATTGAGC.............................................................. 20 0 1 5.00 5 2 1 0 2 0 0
.....................................................................................................AACGGGTATTTATTGAGCAA............................................................ 20 1 1 4.00 4 0 1 3 0 0 0
.....................................................................................................AACGGGTATTTATTGAGC.............................................................. 18 0 3 2.67 8 5 2 1 0 0 0
..................................................................................................TTCAACGGGTATTTATTGAGA.............................................................. 21 1 4 2.50 10 2 1 6 1 0 0
..................................................................................................TTCAACGGGTATTTATTGAGCAT............................................................ 23 1 5 2.40 12 1 6 1 1 1 2
..................................................................................................TTCAACGGGCATTTATTGAGCA............................................................. 22 1 1 2.00 2 0 0 2 0 0 0
...................................................................................................TCAACGGGTATTTATTGAGCAA............................................................ 22 1 1 2.00 2 0 2 0 0 0 0
..................................................................................................TTCAACGGGTATTTATCGAGC.............................................................. 21 1 1 2.00 2 2 0 0 0 0 0
.................................................................................................ATTCAACGGGTATTTATTGAGCA............................................................. 23 0 1 1.00 1 0 0 1 0 0 0
..................................................................................................TTCAACGGGTATTTATTGCGC.............................................................. 21 1 1 1.00 1 1 0 0 0 0 0
..................................................................................................TTCGACGGGTATTTATTGAGCA............................................................. 22 1 1 1.00 1 0 1 0 0 0 0
..................................................................................................TTCAACGGGTATTTATTGAGCT............................................................. 22 1 4 1.00 4 0 0 2 1 0 1
.................................................................................................CTTCAACGGGTATTTATTGAG............................................................... 21 1 1 1.00 1 0 0 1 0 0 0
..................................................................................................TTCAACGGGTATTTATTGCG............................................................... 20 1 1 1.00 1 0 1 0 0 0 0
..................................................................................................TTCAACGGGTCTTTATTGAGC.............................................................. 21 1 2 1.00 2 1 0 0 0 1 0
..................................................................................................TTCAACGGGTATTTATTGGGCA............................................................. 22 1 1 1.00 1 0 1 0 0 0 0
...................................................................................................TCAACGGGTATTTATTGAGCA............................................................. 21 0 1 1.00 1 0 1 0 0 0 0
..................................................................................................TTCAACGGGTATTTATTTAG............................................................... 20 1 1 1.00 1 0 1 0 0 0 0
..................................................................................................TTCAACGGGTATTTATTGAGCAC............................................................ 23 0 1 1.00 1 0 1 0 0 0 0
..................................................................................................TTCAGCGGGTATTTATTGAGC.............................................................. 21 1 6 0.83 5 3 0 0 0 2 0
..................................................................................................TTTAACGGGTATTTATTGAGCA............................................................. 22 1 3 0.67 2 0 2 0 0 0 0
..................................................................................................TTCAACGGGTATTTATT.................................................................. 17 0 3 0.67 2 0 2 0 0 0 0
.....................................................................................................AACGGGTATTTATTG................................................................. 15 0 6 0.50 3 0 3 0 0 0 0
..................................................................................................TTCAACGGGTATTTATTGAGCC............................................................. 22 1 2 0.50 1 0 1 0 0 0 0
..................................................................................................TTCAACGGGTATTTAT................................................................... 16 0 4 0.50 2 0 0 0 1 0 1
..................................................................................................ATCAACGGGTATTTATTGAGCA............................................................. 22 1 2 0.50 1 1 0 0 0 0 0
...................................................................................................TCAACGGGTATTTATTG................................................................. 17 0 2 0.50 1 0 0 1 0 0 0
..................................................................................................TTCAACGGGAATTTATTGAGC.............................................................. 21 1 3 0.33 1 0 0 0 1 0 0
..................................................................................................TTCAACGGGTATTTTTTGAGC.............................................................. 21 1 3 0.33 1 1 0 0 0 0 0
..................................................................................................TTCAACGGGGATTTATTGAGC.............................................................. 21 1 6 0.33 2 1 0 0 0 1 0
..................................................................................................TTCAACGGGAATTTATTGAG............................................................... 20 1 3 0.33 1 0 1 0 0 0 0
..................................................................................................TTCAACGGGCATTTATTGAGC.............................................................. 21 1 4 0.25 1 0 0 0 1 0 0
..................................................................................................TTCCACGGGTATTTATTGAGC.............................................................. 21 1 4 0.25 1 0 1 0 0 0 0
..................................................................................................TTCCACGGGTATTTATTGAGCA............................................................. 22 1 4 0.25 1 0 1 0 0 0 0
..................................................................................................CTCAACGGGTATTTATTGAGCAA............................................................ 23 2 4 0.25 1 0 1 0 0 0 0
.....................................................................................................AACGGGTATTTATTGA................................................................ 16 0 4 0.25 1 0 1 0 0 0 0
..................................................................................................TTCAACGTGTATTTATTGAGCA............................................................. 22 1 10 0.20 2 0 2 0 0 0 0
..................................................................................................TTCAACGGGTATTTATTGAGTA............................................................. 22 1 6 0.17 1 0 0 1 0 0 0
.....................................................................................................AACGGGTATTTATTGAGCAT............................................................ 20 1 12 0.17 2 0 2 0 0 0 0
.....................................................................................................AACGGGGATTTATTGAGCA............................................................. 19 1 6 0.17 1 0 1 0 0 0 0
..................................................................................................TTCAATGGGTATTTATTGAGC.............................................................. 21 1 13 0.15 2 2 0 0 0 0 0
..................................................................................................TTCAACGGGTATTTATTGAGT.............................................................. 21 1 8 0.13 1 0 1 0 0 0 0
..................................................................................................TTCAACGGGTATTTCTTGAG............................................................... 20 1 11 0.09 1 0 1 0 0 0 0

Anti-sense strand reads

GGGGACCCGTAGGTAGACGTCGCGGGGTCCTTCCGTCCTGACACTACGAATTGTGTgtgggGgGtGTTtTTTtgtttgttgTTtACTCTACGCAATTTttGTTGgggtTtttTttgTgGTGGGTGtGtgtgGGTgTGgGtgTgtggggGgGGgTgggggTgTGggTgTTgTGTGgtgGTgG

***********************************....((......((..(((.((((((.(((((((((((((((((((((((...........))))))))))))))))))))))).)))))).)))...)).........))*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR066809

ovary		 SRR066810

testes
.............TAGACGTCGCGGGTGCCTTC.................................................................................................................................................... 20 2 6 0.33 2 1 1

Generated: 09/01/2015 at 11:41 AM