ID:

ssc-mir-92a-2

 Coordinate:

chrX:126199512-126199591 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-39.7 -39.7 -39.5
mature

  1. ssc-mir-92a-1  chr11:66610809-66610830 +
  2. ssc-mir-92a-2  chrX:126199520-126199541 -
star

Sense Strand Reads

CTGTCTCCGGCTCTCTGACGCCCTTCTCATGCACCTCCAGCCTTCGCACCCTTTCATCCGTGGGTGGGGATTTGTTGCATTACTTGTGGTGTGTATAAAGTATTGCACTTGTCCCGGCCTGTGGAAGAAAGGAGGATTTTATCGTCTTCTTATTTCAGTTTTAAAGGCTGTAAGTTCTGA

**********************************************...((((((.(((((((((.(((((..((.(((.((((((((.....))).))))).)))))..))))).))))))))).)))))).....******************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR066809

ovary		 SRR066810

testes		 SRR1274763

ovary		 SRR139075

testes		 SRR1274764

testes		 SRR139076

testes
....................................................................................................TATTGCACTTGTCCCGGCCTGT.......................................................... 22 0 2 67438.00 134876 62231 52203 10027 8446 1645 324
....................................................................................................TATTGCACTTGTCCCGGCCTGTA......................................................... 23 1 2 4789.00 9578 3804 2774 1942 694 337 27
....................................................................................................TATTGCACTTGTCCCGGCCTG........................................................... 21 0 2 3082.00 6164 2583 2319 246 911 65 40
....................................................................................................TATTGCACTTGTCCCGGCCTGTAT........................................................ 24 2 2 2701.00 5402 814 570 2968 227 803 20
.....................................................................................................ATTGCACTTGTCCCGGCCTGT.......................................................... 21 0 2 2546.00 5092 2351 2421 148 159 7 6
....................................................................................................TATTGCACTTGTCCCGGCCTGTAA........................................................ 24 2 2 2086.50 4173 469 415 2221 171 873 24
....................................................................................................TATTGCACTTGTCCCGGCCT............................................................ 20 0 2 1062.50 2125 469 370 24 1194 7 61
....................................................................................................CATTGCACTTGTCCCGGCCTGT.......................................................... 22 1 2 620.00 1240 576 657 0 6 1 0
....................................................................................................TATTGCACTTGTCCCGGCCTGA.......................................................... 22 1 2 457.50 915 189 191 246 221 54 14
....................................................................................................TATTGCACTTGTCCCGGCCTGTAG........................................................ 24 1 2 346.50 693 110 74 386 67 52 4
....................................................................................................TATTGCACTTGTCCCGGCC............................................................. 19 0 2 322.50 645 128 123 247 106 36 5
....................................................................................................TATTGCACTTGTCCCGGCCTGTGAAC...................................................... 26 2 1 292.00 292 0 0 0 270 0 22
....................................................................................................TATTGCACTTGTCCCGGCCTGTAAA....................................................... 25 2 2 241.50 483 30 38 253 8 154 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTAAT....................................................... 25 3 2 232.00 464 73 90 156 11 133 1
....................................................................................................TATTGCACTTGTCCCGGCCTGC.......................................................... 22 1 2 202.50 405 141 133 42 58 24 7
....................................................................................................TATTGCACTTGTCCCGGCCTGTCGAAC..................................................... 27 2 1 178.00 178 0 0 0 162 0 16
.....................................................................................................ATTGCACTTGTCTCGGTCTGA.......................................................... 21 3 20 171.50 3430 1408 1524 10 459 5 24
.....................................................................................................ATTGCACTTGTCCCGGCCTGTA......................................................... 22 1 2 169.00 338 161 131 24 19 2 1
....................................................................................................TATTGCACTTGTCCCGGCCTT........................................................... 21 1 2 139.50 279 124 119 1 33 0 2
...................................................................................................CTATTGCACTTGTCCCGGCCTGT.......................................................... 23 1 2 113.50 227 108 106 4 7 2 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTAGT....................................................... 25 2 2 113.00 226 74 54 61 6 31 0
.....................................................................................................ATTGCACTTGTCCCGGCCTG........................................................... 20 0 2 103.00 206 95 93 4 12 1 1
....................................................................................................TATTGCACTTGTCCCGGCCTGTATT....................................................... 25 3 2 91.00 182 67 45 55 4 11 0
....................................................................................................TATTGCACTTGTCCCGGCCTTT.......................................................... 22 1 2 89.50 179 70 55 0 49 2 3
....................................................................................................TATTGCACTTGTCCCGGCCTGTG......................................................... 23 0 1 89.00 89 42 23 18 5 1 0
....................................................................................................TATTGCACTTGTCCCGGC.............................................................. 18 0 2 84.00 168 58 36 9 63 1 1
....................................................................................................TATTGCACTTGTCTCGGCCTGT.......................................................... 22 1 2 80.50 161 57 46 3 50 0 5
....................................................................................................TATTGCACTTGTCCCGGCCTGTAGA....................................................... 25 1 2 77.50 155 40 34 54 9 17 1
......................................................................................................TTGCACTTGTCCCGGCCTGT.......................................................... 20 0 2 76.50 153 74 71 0 8 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTAGAAC..................................................... 27 2 1 76.00 76 0 0 0 71 0 5
....................................................................................................TATTGCACTTGTCCCGGCCTGTAC........................................................ 24 2 2 75.50 151 27 21 75 3 24 1
....................................................................................................TATTGCACTTGTCCCGGCCTGAA......................................................... 23 2 2 71.00 142 41 23 12 58 4 4
....................................................................................................TATTGCACTTGTCCTGGCCTGT.......................................................... 22 1 2 70.50 141 50 39 5 44 0 3
.................................................................................................ATTTATTGCACTTGTCCCGGCCTGT.......................................................... 25 2 1 69.00 69 43 26 0 0 0 0
.....................................................................................................ATTGCACTTGTCTCGGTCTGT.......................................................... 21 2 3 67.33 202 83 95 1 18 0 5
....................................................................................................TATTGCACTTGTCTCGGTCTGA.......................................................... 22 3 7 65.29 457 227 189 2 36 0 3
....................................................................................................TATTGCACTTGTCCCGGCCTGTGA........................................................ 24 1 1 56.00 56 26 10 18 1 1 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTAGAC...................................................... 26 2 2 52.50 105 0 0 0 99 0 6
....................................................................................................TATTGCACTTGTTCCGGCCTGT.......................................................... 22 1 2 47.50 95 31 16 6 41 0 1
....................................................................................................TATTGCACTTGTCCCGGCCTGTC......................................................... 23 1 2 46.00 92 48 34 8 1 1 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTAGGAC..................................................... 27 3 1 45.00 45 0 0 0 38 0 7
.....................................................................................................ATTGCACTTGTCTCGGTCTG........................................................... 20 2 4 45.00 180 56 53 0 65 0 6
.....................................................................................................ATTGCACTTGTCCCGGCCTGTAA........................................................ 23 2 2 43.00 86 18 20 39 1 8 0
....................................................................................................TATTGCACTTGTCTCGGTCTGT.......................................................... 22 2 2 42.50 85 39 43 0 3 0 0
....................................................................................................TATTGCACTTGTCCCAGCCTGT.......................................................... 22 1 2 41.50 83 52 23 3 5 0 0
....................................................................................................TATTGTACTTGTCCCGGCCTGT.......................................................... 22 1 2 41.50 83 36 25 1 21 0 0
....................................................................................................TATTGCATTTGTCCCGGCCTGT.......................................................... 22 1 2 41.50 83 22 25 0 35 0 1
....................................................................................................TATTGCACTCGTCCCGGCCTGT.......................................................... 22 1 2 39.00 78 39 35 2 2 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTTGAAC..................................................... 27 2 2 38.50 77 0 0 0 71 0 6
....................................................................................................TATTGCACTTGTCCCGGCCTGG.......................................................... 22 1 2 38.50 77 22 8 28 15 4 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTGAGC...................................................... 26 3 1 37.00 37 0 0 0 37 0 0
....................................................................................................TATTGCACTTGTCCCGG............................................................... 17 0 2 36.00 72 36 26 0 10 0 0
....................................................................................................TATCGCACTTGTCCCGGCCTGT.......................................................... 22 1 2 34.50 69 37 23 1 8 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTAT.......................................................... 22 1 2 33.50 67 18 17 1 30 0 1
....................................................................................................TATTGCACTTATCCCGGCCTGT.......................................................... 22 1 2 32.00 64 40 18 1 5 0 0
.....................................................................................................ATTGCACTTGTCCCGGCCTGTAT........................................................ 23 2 3 32.00 96 27 23 31 8 7 0
....................................................................................................TATTGCACTTGCCCCGGCCTGT.......................................................... 22 1 2 31.00 62 32 19 5 6 0 0
....................................................................................................TATTGCCCTTGTCCCGGCCTGT.......................................................... 22 1 2 30.50 61 19 13 2 26 1 0
....................................................................................................TATTGCACTTGTCCCGGCCTGAAA........................................................ 24 3 2 29.50 59 10 9 4 24 10 2
....................................................................................................TATTGCACTTGTCCCGGCCTGTGT........................................................ 24 1 1 29.00 29 10 11 7 1 0 0
....................................................................................................TATTGCACTTGTCCCGGTCTGT.......................................................... 22 1 2 29.00 58 24 11 0 21 0 2
....................................................................................................TATTGCACTTGTCCCGACCTGT.......................................................... 22 1 2 27.50 55 26 21 1 7 0 0
....................................................................................................TATTGCGCTTGTCCCGGCCTGT.......................................................... 22 1 2 26.50 53 26 21 0 6 0 0
....................................................................................................TATTGCACTTGTCCCGGCTTGT.......................................................... 22 1 2 26.00 52 8 9 1 32 0 2
....................................................................................................TATTGCACTTGTCCCGGCCTGTAAC....................................................... 25 3 2 26.00 52 12 4 10 23 3 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTAAAC...................................................... 26 3 2 26.00 52 0 1 0 47 0 4
....................................................................................................TATTACACTTGTCCCGGCCTGT.......................................................... 22 1 2 26.00 52 27 21 0 4 0 0
....................................................................................................TGTTGCACTTGTCCCGGCCTGT.......................................................... 22 1 2 26.00 52 17 33 1 1 0 0
....................................................................................................TATTGCACTTGTCCCGGCCCGT.......................................................... 22 1 2 25.50 51 27 18 2 4 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTAGC....................................................... 25 2 2 24.00 48 3 1 4 33 3 4
....................................................................................................TACTGCACTTGTCCCGGCCTGT.......................................................... 22 1 2 24.00 48 27 13 3 5 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTAA.......................................................... 22 2 2 23.00 46 6 6 1 28 1 4
....................................................................................................TATTGCACTTGTCCCGGCCTGTAAG....................................................... 25 3 2 22.00 44 7 5 24 4 4 0
....................................................................................................TATTGCACTTGTCCCGGCCTA........................................................... 21 1 2 22.00 44 11 13 0 19 0 1
....................................................................................................TATTGCACTTGTCCCGGCCTGAAT........................................................ 24 3 2 21.50 43 7 7 16 11 2 0
....................................................................................................TATTGCACTTTTCCCGGCCTGT.......................................................... 22 1 2 21.00 42 14 7 2 19 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTAAAT...................................................... 26 3 2 20.00 40 4 2 20 0 14 0
....................................................................................................CATTGCACTTGTCCCGGCCTG........................................................... 21 1 2 19.00 38 16 22 0 0 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGCA......................................................... 23 2 2 18.50 37 5 9 12 5 6 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTATA....................................................... 25 2 2 18.50 37 10 6 12 2 7 0
....................................................................................................TATTGCACTTGTCCCTGCCTGT.......................................................... 22 1 2 18.00 36 15 14 0 7 0 0
....................................................................................................TATTGCACCTGTCCCGGCCTGT.......................................................... 22 1 2 17.00 34 18 10 0 4 0 2
....................................................................................................TATTGCACTTGTCCCGGCCTGTGAC....................................................... 25 2 1 16.00 16 0 0 0 16 0 0
....................................................................................................TATTGCACTCGTCCCGGCCTTT.......................................................... 22 2 3 16.00 48 6 1 7 29 0 5
....................................................................................................AATTGCACTTGTCCCGGCCTGT.......................................................... 22 1 2 15.50 31 14 11 1 5 0 0
....................................................................................................TATTGCACTTGTCCCCGCCTGT.......................................................... 22 1 2 15.00 30 17 9 1 2 1 0
....................................................................................................TATTGCACTTGTCCCGGCCTTA.......................................................... 22 2 2 14.50 29 9 6 0 14 0 0
....................................................................................................TATTGCACTTGTCCCGTCCTGT.......................................................... 22 1 2 14.50 29 15 9 0 5 0 0
....................................................................................................TATTGCACTTGTCTCGGTCTG........................................................... 21 2 2 14.50 29 9 9 0 11 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTAAAA...................................................... 26 2 1 14.00 14 3 1 4 0 6 0
.....................................................................................................ATTGCACTTGTCCCGGCCT............................................................ 19 0 2 14.00 28 8 6 1 13 0 0
....................................................................................................TATTGCTCTTGTCCCGGCCTGT.......................................................... 22 1 2 14.00 28 15 10 0 2 0 1
....................................................................................................TATTCCACTTGTCCCGGCCTGT.......................................................... 22 1 2 14.00 28 13 11 2 2 0 0
......................................................................................................TTGCACTTGTCCCGGCCTGTA......................................................... 21 1 2 13.50 27 11 16 0 0 0 0
....................................................................................................TATTGCACTAGTCCCGGCCTGT.......................................................... 22 1 2 13.50 27 12 9 0 6 0 0
....................................................................................................TAATGCACTTGTCCCGGCCTGT.......................................................... 22 1 2 13.50 27 16 10 1 0 0 0
....................................................................................................CATTGCACTTGTCCCGGCCTGTA......................................................... 23 2 3 13.00 39 21 15 2 1 0 0
....................................................................................................TATTGCACTTGTCCCGCCCTGT.......................................................... 22 1 2 13.00 26 10 9 1 6 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGAGA........................................................ 24 2 1 12.00 12 5 5 2 0 0 0
....................................................................................................TATAGCACTTGTCCCGGCCTGT.......................................................... 22 1 2 11.50 23 9 12 0 2 0 0
.....................................................................................................ATTGCACTTGTCCCGGCCTGTGAAC...................................................... 25 2 1 11.00 11 0 0 0 9 0 2
....................................................................................................TATTGCACTTGTCCCGGCCTGTCGAC...................................................... 26 2 2 10.50 21 0 0 0 21 0 0
....................................................................................................TATTGCACATGTCCCGGCCTGT.......................................................... 22 1 2 10.50 21 11 5 1 4 0 0
...................................................................................................ATATTGCACTTGTCCCGGCCTGT.......................................................... 23 1 2 10.00 20 8 12 0 0 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTAGAA...................................................... 26 1 1 10.00 10 1 1 3 3 2 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTGAAAC..................................................... 27 2 1 10.00 10 0 0 0 10 0 0
....................................................................................................TATTGCACTTGTTCCGGCCT............................................................ 20 1 2 10.00 20 0 0 0 19 0 1
....................................................................................................TATTGCACTCGTCCCGGCCTAT.......................................................... 22 2 3 9.67 29 1 0 4 23 0 1
.....................................................................................................ATTGCACTTGTCCCGGCCTGA.......................................................... 21 1 2 9.50 19 9 3 3 3 0 1
....................................................................................................TATTTCACTTGTCCCGGCCTGT.......................................................... 22 1 2 9.50 19 9 4 0 6 0 0
....................................................................................................TATTGCACTTGTCACGGCCTGT.......................................................... 22 1 2 9.50 19 11 5 1 2 0 0
....................................................................................................TATTGCACTTCTCCCGGCCTGT.......................................................... 22 1 2 9.00 18 8 7 0 3 0 0
....................................................................................................TTTTGCACTTGTCCCGGCCTGT.......................................................... 22 1 2 9.00 18 9 8 0 1 0 0
....................................................................................................TATTGCACTTGACCCGGCCTGT.......................................................... 22 1 2 9.00 18 7 9 0 2 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGCGAAC...................................................... 26 3 1 9.00 9 0 0 0 9 0 0
....................................................................................................TATTGCACTTGTCCCGGCCA............................................................ 20 1 2 9.00 18 5 8 1 4 0 0
........................................................................................................GCACTTGTCCCGGCCTGT.......................................................... 18 0 2 8.50 17 9 6 0 2 0 0
....................................................................................................GATTGCACTTGTCCCGGCCTGT.......................................................... 22 1 2 8.50 17 4 10 0 3 0 0
....................................................................................................TATTGCACTTGTCCAGGCCTGT.......................................................... 22 1 2 8.00 16 7 5 0 4 0 0
....................................................................................................TATTGCACTTGTCCCGGCCAGT.......................................................... 22 1 2 8.00 16 11 5 0 0 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTGGAC...................................................... 26 1 1 8.00 8 0 0 0 7 0 1
....................................................................................................TATTGCACTTGTACCGGCCTGT.......................................................... 22 1 2 8.00 16 8 5 0 2 1 0
....................................................................................................CATTGCACTTGTCCCGGCCTGA.......................................................... 22 2 3 7.67 23 10 12 1 0 0 0
....................................................................................................TATTGCACTTGTCCGGGCCTGT.......................................................... 22 1 2 7.50 15 5 6 0 4 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTAAGA...................................................... 26 3 1 7.00 7 1 2 1 0 3 0
....................................................................................................TATTGCACTTGTCCCGGTCTGA.......................................................... 22 2 2 7.00 14 11 2 0 1 0 0
.....................................................................................................ATTGCACTTGTCCCGGCCTGTAG........................................................ 23 1 2 7.00 14 1 1 5 7 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTTAAA...................................................... 26 2 2 7.00 14 1 1 8 0 4 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTAGAAAC.................................................... 28 3 1 7.00 7 0 0 0 6 0 1
.................................................................................................ATTTATTGCACTTGTCCCGGCCTGTA......................................................... 26 3 1 7.00 7 3 4 0 0 0 0
....................................................................................................TATTGGACTTGTCCCGGCCTGT.......................................................... 22 1 2 7.00 14 10 4 0 0 0 0
....................................................................................................TATTGCACTTGTCCCGGCA............................................................. 19 1 3 6.67 20 7 10 1 1 0 1
....................................................................................................TCTTGCACTTGTCCCGGCCTGT.......................................................... 22 1 2 6.50 13 1 0 0 10 1 1
....................................................................................................TATTGCACTTGTCCCGGCCTGAAG........................................................ 24 2 2 6.50 13 0 2 2 9 0 0
.....................................................................................................ATTGCACTTGTCCCGGCCTGTC......................................................... 22 1 2 6.50 13 5 8 0 0 0 0
....................................................................................................TATTGCACTTGTGCCGGCCTGT.......................................................... 22 1 2 6.50 13 4 8 0 1 0 0
..........................................................................................................ACTTGTCCCGGCCTGT.......................................................... 16 0 2 6.50 13 4 5 0 4 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTGCAC...................................................... 26 2 1 6.00 6 0 0 0 6 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTGAA....................................................... 25 1 1 6.00 6 4 2 0 0 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTAG.......................................................... 22 2 2 6.00 12 1 3 0 8 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTGAT....................................................... 25 2 1 6.00 6 1 2 3 0 0 0
....................................................................................................TATTGCACTTGTCTCGGCCTG........................................................... 21 1 2 6.00 12 4 4 0 4 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTCA........................................................ 24 2 2 6.00 12 4 3 5 0 0 0
...................................................................................................CTATTGCACTTGTCCCGGCCTGTA......................................................... 24 2 2 6.00 12 5 6 1 0 0 0
..................................................................................................CATATTGCACTTGTCCCGGCCTGT.......................................................... 24 2 2 6.00 12 7 5 0 0 0 0
....................................................................................................CATTGCACTTGTCCCGGTCTGT.......................................................... 22 2 2 6.00 12 6 4 1 1 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTCT.......................................................... 22 1 2 6.00 12 11 1 0 0 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGAC......................................................... 23 2 2 6.00 12 2 7 0 2 1 0
.....................................................................................................ATTGCACTTGTCCCGGCCTGTAAA....................................................... 24 2 2 6.00 12 3 3 3 2 1 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTGGAAC..................................................... 27 1 1 6.00 6 1 0 0 5 0 0
....................................................................................................TATTGCACTTGTCCTGGCCTG........................................................... 21 1 2 5.50 11 4 4 0 2 0 1
....................................................................................................TATTGCAATTGTCCCGGCCTGT.......................................................... 22 1 2 5.50 11 7 3 0 1 0 0
.....................................................................................................ATTGCACTTGTCCCGGCC............................................................. 18 0 2 5.00 10 4 2 1 3 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGAG......................................................... 23 1 1 5.00 5 0 2 1 2 0 0
.................................................................................................ATTTATTGCACTTGTCCCGGCCTG........................................................... 24 2 1 5.00 5 2 3 0 0 0 0
....................................................................................................TATTGCACTTGGCCCGGCCTGT.......................................................... 22 1 2 5.00 10 2 0 0 8 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTATAAC..................................................... 27 3 1 5.00 5 0 0 0 5 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTCT........................................................ 24 2 2 5.00 10 2 3 3 2 0 0
....................................................................................................TATTGCACTTGTCCCGGCATGT.......................................................... 22 1 2 5.00 10 6 3 0 1 0 0
....................................................................................................TATTGCACTTGTTCCGGCCTGTA......................................................... 23 2 2 5.00 10 1 2 1 6 0 0
....................................................................................................TATTGCATTTGTCCCGGCCT............................................................ 20 1 2 5.00 10 1 0 0 9 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTAAAAA..................................................... 27 3 1 5.00 5 0 1 2 0 2 0
....................................................................................................TATTGCACTTGTCCCGGCAT............................................................ 20 1 2 4.50 9 2 3 0 4 0 0
....................................................................................................TATTGTACTTGTCCCGGCCTGTA......................................................... 23 2 2 4.50 9 1 5 1 1 1 0
....................................................................................................TATTGCACTTGTCCCGGCCTGCAA........................................................ 24 3 2 4.50 9 1 2 2 1 1 2
....................................................................................................TATTGAACTTGTCCCGGCCTGT.......................................................... 22 1 2 4.50 9 7 2 0 0 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTTTA......................................................... 23 2 2 4.50 9 5 1 0 2 0 1
....................................................................................................TATTGCACTTGTCCCGGCCTAAA......................................................... 23 3 2 4.00 8 3 0 0 5 0 0
....................................................................................................TATTGCACTTGTTTCGGCCTGT.......................................................... 22 2 2 4.00 8 2 2 0 3 0 1
..................................................................................................AATATTGCACTTGTCCCGGCCTGT.......................................................... 24 1 1 4.00 4 1 3 0 0 0 0
....................................................................................................TATTGCACTTGTCCCGGCCGGT.......................................................... 22 1 2 4.00 8 3 0 0 5 0 0
.....................................................................................................ATTGCACTTGTCCCGGCCTGTCGAAC..................................................... 26 2 1 4.00 4 0 0 0 4 0 0
.....................................................................................................ATTGCACTTGTCCCGGCCTGTAAT....................................................... 24 3 2 4.00 8 1 2 4 1 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTCAAC...................................................... 26 3 2 4.00 8 0 0 0 7 0 1
....................................................................................................TATTGCACTTGTCCCGGCCTGCAT........................................................ 24 3 2 4.00 8 1 0 0 6 0 1
.....................................................................................................ATTGCACTTGTCCCGGCCTGTGA........................................................ 23 1 1 4.00 4 0 2 2 0 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTCGGAC..................................................... 27 3 1 4.00 4 0 0 0 3 0 1
..................................................................................................ATTATTGCACTTGTCCCGGCCTGT.......................................................... 24 1 1 4.00 4 2 2 0 0 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTGACC...................................................... 26 3 1 4.00 4 0 0 0 4 0 0
.....................................................................................................ACTGGACTTGTCCCGGCCTGT.......................................................... 21 2 2 4.00 8 3 5 0 0 0 0
....................................................................................................TATTGCACTTGTCCCGGCTTGTAT........................................................ 24 3 2 4.00 8 0 0 0 8 0 0
.....................................................................................................ATTGCACTTGTCCCGGCCTGTG......................................................... 22 0 1 4.00 4 3 0 1 0 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTTAA......................................................... 23 3 2 4.00 8 0 0 0 8 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTATAA...................................................... 26 2 1 4.00 4 0 0 1 0 3 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTCAAAC..................................................... 27 3 1 4.00 4 0 0 0 4 0 0
...................................................................................................CTATTGCACTTGTCCCGGCCTG........................................................... 22 1 2 4.00 8 5 3 0 0 0 0
.....................................................................................................ATTGCACTTGTCTCGGTCT............................................................ 19 2 15 3.93 59 21 12 0 23 1 2
....................................................................................................TATTGCACTTGTCCCGGA.............................................................. 18 1 3 3.67 11 5 6 0 0 0 0
....................................................................................................TATTGCACTTGTCCCG................................................................ 16 0 2 3.50 7 3 2 0 1 0 1
......................................................................................................TTGCACTTGTCCCGGCCTGTAA........................................................ 22 2 2 3.50 7 2 0 4 1 0 0
....................................................................................................TATTGCAGTTGTCCCGGCCTGT.......................................................... 22 1 2 3.50 7 5 1 0 1 0 0
....................................................................................................TATTGCACTTGTCCCGGACTGT.......................................................... 22 1 2 3.50 7 3 1 0 3 0 0
....................................................................................................TATTGCACTTGTCCCGGCT............................................................. 19 1 2 3.50 7 3 2 1 1 0 0
.....................................................................................................ATTGCACTTGTCCCGGCCTGAA......................................................... 22 2 2 3.50 7 0 4 1 2 0 0
....................................................................................................TATTACACTTGTCCCGGCCTGTA......................................................... 23 2 2 3.50 7 4 3 0 0 0 0
....................................................................................................TATTGCATTTGTCCCGGCCTGTA......................................................... 23 2 2 3.50 7 2 1 0 4 0 0
.....................................................................................................ATTGCACTTATCCCGGCCTGT.......................................................... 21 1 2 3.50 7 3 3 0 1 0 0
.....................................................................................................ATTGCACTTGTCCCGGCCTGC.......................................................... 21 1 2 3.50 7 2 2 1 1 1 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTCGATC..................................................... 27 3 2 3.50 7 0 0 0 7 0 0
....................................................................................................TATTGCACTTGTCTCGGCCTGTA......................................................... 23 2 3 3.33 10 4 2 0 4 0 0
....................................................................................................TATTGCACTTGTCCCGGCCAT........................................................... 21 2 3 3.33 10 1 1 0 8 0 0
....................................................................................................TATTGCACTTGTCTCGGTCT............................................................ 20 2 3 3.33 10 3 3 0 4 0 0
......................................................................................................TTGCACTTGTCCCGGCCTGTAT........................................................ 22 2 5 3.20 16 6 9 1 0 0 0
....................................................................................................TATTGCACTTTTCCCGGCCT............................................................ 20 1 2 3.00 6 0 0 0 6 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTGGAAAC.................................................... 28 2 1 3.00 3 0 0 0 3 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTGGC....................................................... 25 1 1 3.00 3 0 0 0 3 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTGTA....................................................... 25 1 1 3.00 3 1 1 0 0 1 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTAGTAG..................................................... 27 2 1 3.00 3 1 0 0 2 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTGTAAC..................................................... 27 2 1 3.00 3 0 0 0 3 0 0
....................................................................................................TATTGCACTTGTCCCAGCCTGTA......................................................... 23 2 2 3.00 6 4 1 1 0 0 0
.....................................................................................................ATTGCACTTGTCCCGGCCTGTTGAAC..................................................... 26 2 2 3.00 6 0 0 0 6 0 0
....................................................................................................TATCGCACTTGTCCCGGCCTGTA......................................................... 23 2 2 3.00 6 3 0 1 2 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTGTT....................................................... 25 2 1 3.00 3 3 0 0 0 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGAGAAC...................................................... 26 3 1 3.00 3 0 0 0 2 0 1
....................................................................................................TATTGCACTTGTCCCGGCCTGTGGAT...................................................... 26 1 1 3.00 3 0 0 0 3 0 0
....................................................................................................TATTGCACTTGTCCCGTCCTG........................................................... 21 1 2 3.00 6 1 0 1 3 0 1
....................................................................................................TATTGCACTTGTCTCGGCCTGTCGAAC..................................................... 27 3 1 3.00 3 0 0 0 3 0 0
....................................................................................................TATTGCATTTGTCCCGGCCTGTGAAC...................................................... 26 3 1 3.00 3 0 0 0 3 0 0
....................................................................................................TATTGCCCTTGTCCCGGCCT............................................................ 20 1 2 3.00 6 0 0 0 5 0 1
....................................................................................................TATTGCACTTGTCTCGGCCT............................................................ 20 1 2 3.00 6 0 0 0 6 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTAGTA...................................................... 26 2 1 3.00 3 1 1 0 0 1 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTTGAAAC.................................................... 28 3 2 3.00 6 0 0 0 6 0 0
....................................................................................................TATTGCACTTGTCCCGGCTTG........................................................... 21 1 2 3.00 6 0 0 0 6 0 0
...........................................................................................................CTTGTCCCGGCCTGT.......................................................... 15 0 7 2.86 20 14 5 0 0 1 0
....................................................................................................TATTGCACTCGTCCCGGCCTG........................................................... 21 1 3 2.67 8 4 1 1 2 0 0
....................................................................................................TATTGCGCTTGTCCCGGCCTG........................................................... 21 1 2 2.50 5 1 3 0 1 0 0
....................................................................................................TATTGCACTTGTCGCGGCCTGT.......................................................... 22 1 2 2.50 5 4 0 1 0 0 0
....................................................................................................TATTGCACTTGTCCCGGTCTGTA......................................................... 23 2 2 2.50 5 2 2 0 1 0 0
....................................................................................................TATTGCACTTGTCCCGACCTGTA......................................................... 23 2 2 2.50 5 2 1 0 2 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTGGAGC..................................................... 27 2 2 2.50 5 0 0 0 5 0 0
.....................................................................................................ATTGCACTCGTCCCGGCCTGT.......................................................... 21 1 2 2.50 5 3 2 0 0 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGAAGA....................................................... 25 2 2 2.50 5 2 1 1 1 0 0
....................................................................................................TATTGCACTTATCCCGGCCTGTA......................................................... 23 2 2 2.50 5 2 2 1 0 0 0
.....................................................................................................ATTGCCCTTGTCCCGGCCTGT.......................................................... 21 1 2 2.50 5 2 2 0 0 0 1
....................................................................................................TATTGCACTTGTCCCGGCCTGTATAT...................................................... 26 3 2 2.50 5 2 0 2 0 0 1
....................................................................................................TATTGCACTTATCCCGGCCTG........................................................... 21 1 2 2.50 5 1 4 0 0 0 0
.......................................................................................................TGCACTTGTCCCGGCCTGT.......................................................... 19 0 2 2.50 5 4 0 1 0 0 0
....................................................................................................TATTGCACTTGTTCCGGCCTG........................................................... 21 1 2 2.50 5 1 1 1 2 0 0
....................................................................................................TATTGTACTTGTCCCGGCCTG........................................................... 21 1 2 2.50 5 0 2 0 3 0 0
......................................................................................................TTGCACTTGTCCCGGCCTG........................................................... 19 0 2 2.50 5 4 1 0 0 0 0
....................................................................................................CATTGCACTTGTCCCGGCCTGC.......................................................... 22 2 2 2.50 5 2 2 0 1 0 0
....................................................................................................TATTGCACTTGTCCCGGCCCGTA......................................................... 23 2 2 2.50 5 3 2 0 0 0 0
...................................................................................................CTATTGCACTTGTCCCGGCCTGTAA........................................................ 25 3 2 2.50 5 1 2 0 0 2 0
....................................................................................................TATTGCACTTGCCCCGGCCTGTA......................................................... 23 2 2 2.50 5 3 0 0 2 0 0
.....................................................................................................ATCGCACTTGTCCCGGCCTGT.......................................................... 21 1 2 2.50 5 0 5 0 0 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTAAAAT..................................................... 27 3 2 2.50 5 1 0 1 0 3 0
.....................................................................................................ATTGCACTTGTCTCGGCCTGT.......................................................... 21 1 3 2.33 7 3 3 0 1 0 0
.....................................................................................................ATTGCACTTGTCTCGGCCTGA.......................................................... 21 2 3 2.33 7 4 2 0 1 0 0
....................................................................................................TATTGCACTTGTCCCGGCTTGA.......................................................... 22 2 2 2.00 4 0 0 0 3 0 1
.................................................................................................ATCTATTGCACTTGTCCCGGCCTGT.......................................................... 25 2 1 2.00 2 1 1 0 0 0 0
.................................................................................................ATTTATTGCACTTGTCCCGGCCTGTT......................................................... 26 3 2 2.00 4 1 3 0 0 0 0
....................................................................................................TATTGCACTTGTCCCGGT.............................................................. 18 1 2 2.00 4 3 1 0 0 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTGTAC...................................................... 26 2 1 2.00 2 0 0 0 2 0 0
....................................................................................................CATTGCACTTGTCCCGGCCT............................................................ 20 1 2 2.00 4 0 4 0 0 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTAATA...................................................... 26 3 1 2.00 2 0 0 2 0 0 0
....................................................................................................TACTGCACTTGTCCCGGCCTGTA......................................................... 23 2 4 2.00 8 3 2 1 1 1 0
....................................................................................................TATTGTACTTGTCCCGGCCTGTGAAC...................................................... 26 3 1 2.00 2 0 0 0 2 0 0
....................................................................................................TATTGCACTTGTCTCGGCCTGA.......................................................... 22 2 2 2.00 4 0 3 0 1 0 0
......................................................................................................TTGCACTTGTCCCGGCCTGTCT........................................................ 22 2 2 2.00 4 2 2 0 0 0 0
....................................................................................................TATTGCACTTGTCTCGGCCTGTG......................................................... 23 1 1 2.00 2 1 1 0 0 0 0
....................................................................................................TATTGCACTTTTCCCGGCCTG........................................................... 21 1 2 2.00 4 0 0 0 4 0 0
....................................................................................................TATTGCACTTGTCCCGGCTT............................................................ 20 1 2 2.00 4 1 2 0 1 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTATTA...................................................... 26 3 1 2.00 2 1 1 0 0 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTGGT....................................................... 25 1 1 2.00 2 1 0 0 1 0 0
....................................................................................................TATTGCACTGGTCCCGGCCTGT.......................................................... 22 1 2 2.00 4 1 3 0 0 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGAAC........................................................ 24 3 2 2.00 4 1 0 3 0 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTATAAA..................................................... 27 3 1 2.00 2 0 0 1 0 1 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTGAGAC..................................................... 27 3 1 2.00 2 0 0 0 1 0 1
.......................................................................................................TGCACTTGTCCCGGCCTGTGAC....................................................... 22 2 1 2.00 2 0 0 0 2 0 0
.....................................................................................................ATTGCACTTGTCCCGGCCTGAGA........................................................ 23 2 1 2.00 2 0 1 0 1 0 0
....................................................................................................TATTGCGCTTGTCCCGGCCTGTA......................................................... 23 2 2 2.00 4 1 0 0 3 0 0
.............................................................GGGTGGGGATTTGTTGCATTACT................................................................................................ 23 0 1 2.00 2 0 0 0 2 0 0
.....................................................................................................ATTGCACTTGTCCCGGCCTGTAGT....................................................... 24 2 2 2.00 4 2 2 0 0 0 0
....................................................................................................TATTGCACTTGTCCCGGTCTGTCGAAC..................................................... 27 3 1 2.00 2 0 0 0 2 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTCGCAC..................................................... 27 3 1 2.00 2 0 0 0 2 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTTAAAC..................................................... 27 3 2 2.00 4 0 0 0 4 0 0
.....................................................................................................ATTGCACTTGTCCCGGCCTT........................................................... 20 1 3 2.00 6 1 5 0 0 0 0
....................................................................................................TATTGCACTTCTCCCGGCCTGTAT........................................................ 24 3 3 2.00 6 0 0 2 2 2 0
....................................................................................................TATTGCACTTGTCCCAGCCTGTAT........................................................ 24 3 2 2.00 4 2 0 1 0 1 0
....................................................................................................TATTGCACTTGTCCCGGCCTGGA......................................................... 23 2 2 2.00 4 2 0 1 1 0 0
....................................................................................................TATGGCACTTGTCCCGGCCTGT.......................................................... 22 1 2 2.00 4 2 2 0 0 0 0
....................................................................................................TATTGCACTTGTCCCGGCGTGT.......................................................... 22 1 2 2.00 4 1 1 0 2 0 0
....................................................................................................TATTGCACTTGTCCTGGCCTGTCGAAC..................................................... 27 3 1 2.00 2 0 0 0 2 0 0
....................................................................................................TAGTGCACTTGTCCCGGCCTGT.......................................................... 22 1 2 2.00 4 2 2 0 0 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTGC........................................................ 24 1 1 2.00 2 0 0 2 0 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTAAG......................................................... 23 2 1 2.00 2 0 0 0 2 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTAGAT...................................................... 26 2 2 2.00 4 1 2 1 0 0 0
.................................................................................................ATATATTGCACTTGTCCCGGCCTGT.......................................................... 25 2 1 2.00 2 2 0 0 0 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGAAGAC...................................................... 26 3 2 2.00 4 0 0 0 4 0 0
.....................................................................................................ATTGCACTTGTCCCCGCCTGT.......................................................... 21 1 2 2.00 4 3 1 0 0 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTAAAAG..................................................... 27 2 1 2.00 2 1 0 1 0 0 0
.....................................................................................................ATTGCACTTGTCTCGGTCTGTGGAC...................................................... 25 3 1 2.00 2 0 0 0 2 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTAGCAC..................................................... 27 3 1 2.00 2 0 0 0 2 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTCGAAAC.................................................... 28 3 1 2.00 2 0 0 0 0 0 2
....................................................................................................TATTGCACTTGTCCCGGGCTGT.......................................................... 22 1 2 2.00 4 1 2 0 1 0 0
......................................................................................................TTGCACTTGTCCCGGCCTGTCGAAC..................................................... 25 2 1 2.00 2 0 0 0 2 0 0
....................................................................................................TATTGCACTCGTCCCGGCCTGTA......................................................... 23 2 2 2.00 4 2 1 1 0 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTTAGA...................................................... 26 3 2 2.00 4 1 1 2 0 0 0
....................................................................................................TATTGCACTTGTCTCGGCCTGTGAC....................................................... 25 3 1 2.00 2 0 0 0 2 0 0
....................................................................................................TATTGCACTTGTCCCGGCTTGTA......................................................... 23 2 2 2.00 4 0 0 0 4 0 0
....................................................................................................TATTGCACTTGTCCCGGCCTGTAGTT...................................................... 26 3 2 2.00 4 2 2 0 0 0 0

Anti-sense strand reads

GACAGAGGCCGAGAGACTGCGGGAAGAGTACGTGGAGGTCGGAAGCGTGGGAAAGTAGGCACCCACCCCTAAACAACGTAATGAACACCACACATATTTCATAACGTGAACAGGGCCGGACACCTTCTTTCCTCCTAAAATAGCAGAAGAATAAAGTCAAAATTTCCGACATTCAAGACT

*******************************************...((((((.(((((((((.(((((..((.(((.((((((((.....))).))))).)))))..))))).))))))))).)))))).....********************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR066809

ovary		 SRR066810

testes
.......................................CGGATGCGTGGGAAA.............................................................................................................................. 15 1 20 0.50 10 7 3

Generated: 09/01/2015 at 11:45 AM