ID:

ssc-mir-92a-1

 Coordinate:

chr11:66610762-66610841 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-43.2 -43.0 -43.0
mature

  1. ssc-mir-92a-1  chr11:66610809-66610830 +
  2. ssc-mir-92a-2  chrX:126199520-126199541 -
star

Sense Strand Reads

CTGACTGTGGTAGTGAAAAGTCTGTAGAAAAGTAAGGGAAAATCAAACCCCTTTCTACACAGGTTGGGATCGGTTGCAATGCTGTGTTTCTGTATGGTATTGCACTTGTCCCGGCCTGTTGAGTTTGGTGGGGATTGTGACCAGAAGATTTTGAAAATTAAATATTACTGAAGATTCGAC

*********************************************..((((...((..((((((((((((.(((.(((((((((((......)))))))))))))).))))))))))))..))......)))).********************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR066809

ovary		 SRR066810

testes		 SRR1274763

ovary		 SRR139075

testes		 SRR1274764

testes		 SRR139076

testes
.................................................................................................TATTGCACTTGTCCCGGCCTGT............................................................. 22 0 2 67438.00 134876 62231 52203 10027 8446 1645 324
.................................................................................................TATTGCACTTGTCCCGGCCTGTT............................................................ 23 0 1 14058.00 14058 6496 5656 1376 280 233 17
.................................................................................................TATTGCACTTGTCCCGGCCTGTA............................................................ 23 1 2 4789.00 9578 3804 2774 1942 694 337 27
.................................................................................................TATTGCACTTGTCCCGGCCTG.............................................................. 21 0 2 3082.00 6164 2583 2319 246 911 65 40
.................................................................................................TATTGCACTTGTCCCGGCCTGTAT........................................................... 24 2 2 2701.00 5402 814 570 2968 227 803 20
..................................................................................................ATTGCACTTGTCCCGGCCTGT............................................................. 21 0 2 2546.00 5092 2351 2421 148 159 7 6
.................................................................................................TATTGCACTTGTCCCGGCCTGTAA........................................................... 24 2 2 2086.50 4173 469 415 2221 171 873 24
.................................................................................................TATTGCACTTGTCCCGGCCTGTTT........................................................... 24 1 1 1983.00 1983 731 614 492 55 86 5
.................................................................................................TATTGCACTTGTCCCGGCCT............................................................... 20 0 2 1062.50 2125 469 370 24 1194 7 61
..................................................................................................ATTGCACTTGTCCCGGCCTGTT............................................................ 22 0 1 796.00 796 351 413 23 7 2 0
.................................................................................................CATTGCACTTGTCCCGGCCTGT............................................................. 22 1 2 620.00 1240 576 657 0 6 1 0
............................................................AGGTTGGGATCGGTTGCAATGCT................................................................................................. 23 0 1 526.00 526 5 4 5 463 3 46
.................................................................................................TATTGCACTTGTCCCGGCCTGA............................................................. 22 1 2 457.50 915 189 191 246 221 54 14
.................................................................................................TATTGCACTTGTCCCGGCCTGTTA........................................................... 24 1 1 426.00 426 142 118 127 24 15 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTAG........................................................... 24 1 2 346.50 693 110 74 386 67 52 4
.................................................................................................TATTGCACTTGTCCCGGCC................................................................ 19 0 2 322.50 645 128 123 247 106 36 5
.................................................................................................TATTGCACTTGTCCCGGCCTGTAAA.......................................................... 25 2 2 241.50 483 30 38 253 8 154 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTAAT.......................................................... 25 3 2 232.00 464 73 90 156 11 133 1
.................................................................................................TATTGCACTTGTCCCGGCCTGTTAT.......................................................... 25 2 1 204.00 204 35 51 72 1 42 3
.................................................................................................TATTGCACTTGTCCCGGCCTGC............................................................. 22 1 2 202.50 405 141 133 42 58 24 7
...................................................................................................TTGCACTTGTCCCGGCCTGTT............................................................ 21 0 1 202.00 202 112 90 0 0 0 0
..................................................................................................ATTGCACTTGTCTCGGTCTGA............................................................. 21 3 20 171.50 3430 1408 1524 10 459 5 24
...................................................................................................TTGCACTTGTCCCGGCCTGTTT........................................................... 22 1 1 170.00 170 99 71 0 0 0 0
..................................................................................................ATTGCACTTGTCCCGGCCTGTA............................................................ 22 1 2 169.00 338 161 131 24 19 2 1
.................................................................................................TATTGCACTTGTCCCGGCCTGTTTT.......................................................... 25 2 1 157.00 157 52 69 25 4 5 2
.................................................................................................TATTGCACTTGTCCCGGCCTT.............................................................. 21 1 2 139.50 279 124 119 1 33 0 2
................................................................................................CTATTGCACTTGTCCCGGCCTGT............................................................. 23 1 2 113.50 227 108 106 4 7 2 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTAGT.......................................................... 25 2 2 113.00 226 74 54 61 6 31 0
..................................................................................................ATTGCACTTGTCCCGGCCTG.............................................................. 20 0 2 103.00 206 95 93 4 12 1 1
.................................................................................................TATTGCACTTGTCCCGGCCTGTATT.......................................................... 25 3 2 91.00 182 67 45 55 4 11 0
.................................................................................................CATTGCACTTGTCTCGGTCTGTT............................................................ 23 3 6 90.17 541 239 255 11 31 2 3
.................................................................................................CATTGCACTTGTCCCGGCCTGTT............................................................ 23 1 1 90.00 90 45 44 1 0 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTTT............................................................. 22 1 2 89.50 179 70 55 0 49 2 3
.................................................................................................TATTGCACTTGTCCCGGCCTGTTAA.......................................................... 25 1 1 88.00 88 11 9 41 2 25 0
.................................................................................................TATTGCACTTGTCCCGGC................................................................. 18 0 2 84.00 168 58 36 9 63 1 1
..................................................................................................ATTGCACTTGTCCCGGCCTGTTT........................................................... 23 1 1 83.00 83 38 36 8 1 0 0
.................................................................................................TATTGCACTTGTCTCGGCCTGT............................................................. 22 1 2 80.50 161 57 46 3 50 0 5
.................................................................................................TATTGCACTTGTCCCGGCCTGTAGA.......................................................... 25 1 2 77.50 155 40 34 54 9 17 1
...................................................................................................TTGCACTTGTCCCGGCCTGT............................................................. 20 0 2 76.50 153 74 71 0 8 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTAC........................................................... 24 2 2 75.50 151 27 21 75 3 24 1
.................................................................................................TATTGCACTTGTCCCGGCCTGAA............................................................ 23 2 2 71.00 142 41 23 12 58 4 4
.................................................................................................TATTGCACTTGTCCTGGCCTGT............................................................. 22 1 2 70.50 141 50 39 5 44 0 3
..................................................................................................ATTGCACTTGTCTCGGTCTGT............................................................. 21 2 3 67.33 202 83 95 1 18 0 5
.................................................................................................TATTGCACTTGTCTCGGTCTGA............................................................. 22 3 7 65.29 457 227 189 2 36 0 3
.................................................................................................TATTGCACTTGTCCCGGCCTGAT............................................................ 23 1 1 64.00 64 15 9 24 12 2 2
............................................................AGGTTGGGATCGGTTGCAATGC.................................................................................................. 22 0 1 64.00 64 0 0 0 56 2 6
.................................................................................................TATTGCACTTGTCCCGGCCTGTAGAGC........................................................ 27 2 1 63.00 63 2 2 0 58 0 1
.................................................................................................TATTGCACTTGTCCCGGCCTGTAGAC......................................................... 26 2 2 52.50 105 0 0 0 99 0 6
.................................................................................................TATTGCACTTGTTCCGGCCTGT............................................................. 22 1 2 47.50 95 31 16 6 41 0 1
.................................................................................................TATTGCACTTGTCCCGGCCTGTC............................................................ 23 1 2 46.00 92 48 34 8 1 1 0
..................................................................................................ATTGCACTTGTCTCGGTCTG.............................................................. 20 2 4 45.00 180 56 53 0 65 0 6
..................................................................................................ATTGCACTTGTCCCGGCCTGTAA........................................................... 23 2 2 43.00 86 18 20 39 1 8 0
.................................................................................................TATTGCACTTGTCTCGGTCTGT............................................................. 22 2 2 42.50 85 39 43 0 3 0 0
.................................................................................................TATTGCATTTGTCCCGGCCTGT............................................................. 22 1 2 41.50 83 22 25 0 35 0 1
.................................................................................................TATTGTACTTGTCCCGGCCTGT............................................................. 22 1 2 41.50 83 36 25 1 21 0 0
.................................................................................................TATTGCACTTGTCCCAGCCTGT............................................................. 22 1 2 41.50 83 52 23 3 5 0 0
.................................................................................................TATTGCACTCGTCCCGGCCTGT............................................................. 22 1 2 39.00 78 39 35 2 2 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGG............................................................. 22 1 2 38.50 77 22 8 28 15 4 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTTGAAC........................................................ 27 2 2 38.50 77 0 0 0 71 0 6
.................................................................................................TATTGCACTTGTCCCGGCCTGTTG........................................................... 24 0 1 38.00 38 19 14 4 1 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTTC........................................................... 24 1 1 37.00 37 21 12 3 1 0 0
.................................................................................................TATTGCACTTGTCCCGG.................................................................. 17 0 2 36.00 72 36 26 0 10 0 0
.................................................................................................TATCGCACTTGTCCCGGCCTGT............................................................. 22 1 2 34.50 69 37 23 1 8 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTAT............................................................. 22 1 2 33.50 67 18 17 1 30 0 1
.................................................................................................TATTGCACTTATCCCGGCCTGT............................................................. 22 1 2 32.00 64 40 18 1 5 0 0
..................................................................................................ATTGCACTTGTCCCGGCCTGTAT........................................................... 23 2 3 32.00 96 27 23 31 8 7 0
.................................................................................................TATTGCACTTGCCCCGGCCTGT............................................................. 22 1 2 31.00 62 32 19 5 6 0 0
.................................................................................................TATTGCCCTTGTCCCGGCCTGT............................................................. 22 1 2 30.50 61 19 13 2 26 1 0
.................................................................................................TATTGCACTTGTCCCGGCCTGAAA........................................................... 24 3 2 29.50 59 10 9 4 24 10 2
.................................................................................................TATTGCACTTGTCCCGGTCTGT............................................................. 22 1 2 29.00 58 24 11 0 21 0 2
.................................................................................................TATTGCACTTGTCCCGACCTGT............................................................. 22 1 2 27.50 55 26 21 1 7 0 0
.................................................................................................TATTGCGCTTGTCCCGGCCTGT............................................................. 22 1 2 26.50 53 26 21 0 6 0 0
.................................................................................................TATTGCACTTGTCCCGGCTTGT............................................................. 22 1 2 26.00 52 8 9 1 32 0 2
.................................................................................................TATTACACTTGTCCCGGCCTGT............................................................. 22 1 2 26.00 52 27 21 0 4 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTAAC.......................................................... 25 3 2 26.00 52 12 4 10 23 3 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTAAAC......................................................... 26 3 2 26.00 52 0 1 0 47 0 4
.................................................................................................TGTTGCACTTGTCCCGGCCTGT............................................................. 22 1 2 26.00 52 17 33 1 1 0 0
.................................................................................................TATTGCACTTGTCCCGGCCCGT............................................................. 22 1 2 25.50 51 27 18 2 4 0 0
..................................................................................................ATTGCACTTGTCCCGGCCTGTTA........................................................... 23 1 1 25.00 25 10 8 3 4 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTAGC.......................................................... 25 2 2 24.00 48 3 1 4 33 3 4
.................................................................................................TACTGCACTTGTCCCGGCCTGT............................................................. 22 1 2 24.00 48 27 13 3 5 0 0
................................................................................................CTATTGCACTTGTCCCGGCCTGTT............................................................ 24 1 1 24.00 24 14 10 0 0 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTAA............................................................. 22 2 2 23.00 46 6 6 1 28 1 4
...................................................................................................TTGCACTTGTCCCGGCCTGTTTT.......................................................... 23 2 1 22.00 22 12 10 0 0 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTA.............................................................. 21 1 2 22.00 44 11 13 0 19 0 1
.................................................................................................TATTGCACTTGTCCCGGCCTGTAAG.......................................................... 25 3 2 22.00 44 7 5 24 4 4 0
.................................................................................................TATTGCACTTGTCCCGGCCTGAAT........................................................... 24 3 2 21.50 43 7 7 16 11 2 0
.................................................................................................TATTGCACTTTTCCCGGCCTGT............................................................. 22 1 2 21.00 42 14 7 2 19 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTTTT............................................................ 23 1 1 20.00 20 9 5 0 6 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTAAAT......................................................... 26 3 2 20.00 40 4 2 20 0 14 0
.................................................................................................CATTGCACTTGTCCCGGCCTG.............................................................. 21 1 2 19.00 38 16 22 0 0 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGCA............................................................ 23 2 2 18.50 37 5 9 12 5 6 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTATA.......................................................... 25 2 2 18.50 37 10 6 12 2 7 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTTGT.......................................................... 25 1 1 18.00 18 10 4 3 0 1 0
.................................................................................................TATTGCACTTGTCCCTGCCTGT............................................................. 22 1 2 18.00 36 15 14 0 7 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGCT............................................................ 23 1 1 18.00 18 5 9 2 1 1 0
.................................................................................................TATTGCACTTGTCTCGGCCTGTT............................................................ 23 1 1 17.00 17 10 5 1 1 0 0
.................................................................................................TATTGCACCTGTCCCGGCCTGT............................................................. 22 1 2 17.00 34 18 10 0 4 0 2
.................................................................................................TATTGCACTTGTCCCGGCCTGTTTA.......................................................... 25 1 1 17.00 17 7 7 2 0 1 0
.................................................................................................TATTGCACTCGTCCCGGCCTTT............................................................. 22 2 3 16.00 48 6 1 7 29 0 5
.................................................................................................AATTGCACTTGTCCCGGCCTGT............................................................. 22 1 2 15.50 31 14 11 1 5 0 0
.................................................................................................TATTGCACTTGTCCCCGCCTGT............................................................. 22 1 2 15.00 30 17 9 1 2 1 0
.................................................................................................TATTGCACTTGTCTCGGTCTG.............................................................. 21 2 2 14.50 29 9 9 0 11 0 0
.................................................................................................TATTGCACTTGTCCCGTCCTGT............................................................. 22 1 2 14.50 29 15 9 0 5 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTTA............................................................. 22 2 2 14.50 29 9 6 0 14 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTTGAC......................................................... 26 1 1 14.00 14 0 0 0 12 0 2
.................................................................................................TATTGCTCTTGTCCCGGCCTGT............................................................. 22 1 2 14.00 28 15 10 0 2 0 1
..................................................................................................ATTGCACTTGTCCCGGCCT............................................................... 19 0 2 14.00 28 8 6 1 13 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTTAAT......................................................... 26 2 1 14.00 14 1 5 3 0 5 0
.................................................................................................TATTCCACTTGTCCCGGCCTGT............................................................. 22 1 2 14.00 28 13 11 2 2 0 0
...................................................................................................TTGCACTTGTCCCGGCCTGTA............................................................ 21 1 2 13.50 27 11 16 0 0 0 0
.................................................................................................TATTGCACTAGTCCCGGCCTGT............................................................. 22 1 2 13.50 27 12 9 0 6 0 0
.................................................................................................TAATGCACTTGTCCCGGCCTGT............................................................. 22 1 2 13.50 27 16 10 1 0 0 0
.................................................................................................TATTGCACTTGTCCCGCCCTGT............................................................. 22 1 2 13.00 26 10 9 1 6 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGATT........................................................... 24 2 1 13.00 13 2 2 4 3 2 0
....CTGTGGTAGTGAAAAGTCTGTAGAAAAGTAAGGGAAAATCAAACCCCTTTCTACAC........................................................................................................................ 56 0 1 13.00 13 0 0 7 0 6 0
.................................................................................................CATTGCACTTGTCCCGGCCTGTA............................................................ 23 2 3 13.00 39 21 15 2 1 0 0
..................................................................................................ATTGCACTTGTCTCGGTCTGTT............................................................ 22 2 1 13.00 13 6 3 0 4 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTTAT............................................................ 23 2 1 12.00 12 1 3 0 8 0 0
.................................................................................................TATAGCACTTGTCCCGGCCTGT............................................................. 22 1 2 11.50 23 9 12 0 2 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTATT............................................................ 23 1 1 11.00 11 3 0 0 7 0 1
...................................................................................................TTGCACTTGTCCCGGCCTGTTA........................................................... 22 1 1 11.00 11 4 6 0 1 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTCGAC......................................................... 26 2 2 10.50 21 0 0 0 21 0 0
.................................................................................................TATTGCACATGTCCCGGCCTGT............................................................. 22 1 2 10.50 21 11 5 1 4 0 0
..................................................................................................ATTGCACTTGTCTCGGTCTGAT............................................................ 22 3 9 10.11 91 50 37 0 4 0 0
.................................................................................................TATTGCACTTGTTCCGGCCTGTT............................................................ 23 1 1 10.00 10 5 1 2 2 0 0
................................................................................................ATATTGCACTTGTCCCGGCCTGT............................................................. 23 1 2 10.00 20 8 12 0 0 0 0
.................................................................................................TATTGTACTTGTCCCGGCCTGTT............................................................ 23 1 1 10.00 10 5 2 0 2 1 0
.................................................................................................TATTGCACTTGTTCCGGCCT............................................................... 20 1 2 10.00 20 0 0 0 19 0 1
.................................................................................................TATTGCACTTGTCTCGGTCTGAT............................................................ 23 3 2 10.00 20 10 9 0 1 0 0
.................................................................................................TATTGCACTCGTCCCGGCCTAT............................................................. 22 2 3 9.67 29 1 0 4 23 0 1
.................................................................................................TATTTCACTTGTCCCGGCCTGT............................................................. 22 1 2 9.50 19 9 4 0 6 0 0
..................................................................................................ATTGCACTTGTCCCGGCCTGA............................................................. 21 1 2 9.50 19 9 3 3 3 0 1
.................................................................................................TATTGCACTTGTCACGGCCTGT............................................................. 22 1 2 9.50 19 11 5 1 2 0 0
.................................................................................................TTTTGCACTTGTCCCGGCCTGT............................................................. 22 1 2 9.00 18 9 8 0 1 0 0
.................................................................................................TATTGCACTTGTCCTGGCCTGTT............................................................ 23 1 1 9.00 9 3 3 0 3 0 0
.................................................................................................TATTGCACTTGTCCCGGCCA............................................................... 20 1 2 9.00 18 5 8 1 4 0 0
.................................................................................................TATTGCACTTCTCCCGGCCTGT............................................................. 22 1 2 9.00 18 8 7 0 3 0 0
.................................................................................................TATTGCACTTGACCCGGCCTGT............................................................. 22 1 2 9.00 18 7 9 0 2 0 0
.................................................................................................GATTGCACTTGTCCCGGCCTGT............................................................. 22 1 2 8.50 17 4 10 0 3 0 0
.....................................................................................................GCACTTGTCCCGGCCTGT............................................................. 18 0 2 8.50 17 9 6 0 2 0 0
.................................................................................................TATTGCACTTGTCCCGGCCCGTT............................................................ 23 1 1 8.00 8 4 3 0 1 0 0
.................................................................................................TATTGCACTCGTCCCGGCCTGTT............................................................ 23 1 1 8.00 8 3 4 1 0 0 0
.................................................................................................TATCGCACTTGTCCCGGCCTGTT............................................................ 23 1 1 8.00 8 4 4 0 0 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTAAT............................................................ 23 2 1 8.00 8 1 1 0 6 0 0
.................................................................................................TATTGCACTTGTCCCGGCCAGT............................................................. 22 1 2 8.00 16 11 5 0 0 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTTGA.......................................................... 25 0 1 8.00 8 1 3 4 0 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTCGAGC........................................................ 27 2 1 8.00 8 0 0 0 8 0 0
.................................................................................................TATTGCACTTGTCCAGGCCTGT............................................................. 22 1 2 8.00 16 7 5 0 4 0 0
.................................................................................................TATTGCACTCGTCCCGGCCTTTT............................................................ 23 2 1 8.00 8 1 2 1 3 0 1
.................................................................................................TATTGCACTTGTCCCGGCCTGTTAC.......................................................... 25 2 1 8.00 8 2 3 3 0 0 0
.................................................................................................TATTGCACTTGTACCGGCCTGT............................................................. 22 1 2 8.00 16 8 5 0 2 1 0
.................................................................................................TATTGCATTTGTCCCGGCCTGTT............................................................ 23 1 1 8.00 8 2 5 0 1 0 0
.................................................................................................TATTGCACTTGTCCCAGCCTGTT............................................................ 23 1 1 8.00 8 4 3 0 1 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTTAG.......................................................... 25 2 1 8.00 8 4 0 2 0 2 0
.................................................................................................CATTGCACTTGTCCCGGCCTGA............................................................. 22 2 3 7.67 23 10 12 1 0 0 0
.................................................................................................TATTGCACTTGTCCGGGCCTGT............................................................. 22 1 2 7.50 15 5 6 0 4 0 0
...................................................................................................TTGCACTTGTCCCGGCCTGTTAT.......................................................... 23 2 1 7.00 7 0 7 0 0 0 0
..................................................................................................ATTGCACTTGTCCCGGCCTGTAG........................................................... 23 1 2 7.00 14 1 1 5 7 0 0
.................................................................................................TATTGCACTTGTCCCGGTCTGTT............................................................ 23 1 1 7.00 7 3 2 0 2 0 0
............................................................AGGTTGGGATCGGTTGCAATG................................................................................................... 21 0 1 7.00 7 0 0 0 5 0 2
..................................................................................................ATTGCACTTGTCCCGGCCTGTTTT.......................................................... 24 2 1 7.00 7 2 5 0 0 0 0
.................................................................................................CATTGCACTTGTCCCGGCCTGTTT........................................................... 24 2 1 7.00 7 5 2 0 0 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTTAAA......................................................... 26 2 2 7.00 14 1 1 8 0 4 0
.................................................................................................TATTGCACTTGTCCCGGTCTGA............................................................. 22 2 2 7.00 14 11 2 0 1 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTTAGC......................................................... 26 3 1 7.00 7 0 0 0 7 0 0
.................................................................................................TATTGGACTTGTCCCGGCCTGT............................................................. 22 1 2 7.00 14 10 4 0 0 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTTAGT......................................................... 26 3 1 7.00 7 3 2 2 0 0 0
.................................................................................................TATTGCACTTGTCCCGGCA................................................................ 19 1 3 6.67 20 7 10 1 1 0 1
.................................................................................................TATTGCACTTGTGCCGGCCTGT............................................................. 22 1 2 6.50 13 4 8 0 1 0 0
..................................................................................................ATTGCACTTGTCCCGGCCTGTC............................................................ 22 1 2 6.50 13 5 8 0 0 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGAAG........................................................... 24 2 2 6.50 13 0 2 2 9 0 0
.................................................................................................TCTTGCACTTGTCCCGGCCTGT............................................................. 22 1 2 6.50 13 1 0 0 10 1 1
.......................................................................................................ACTTGTCCCGGCCTGT............................................................. 16 0 2 6.50 13 4 5 0 4 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGAC............................................................ 23 2 2 6.00 12 2 7 0 2 1 0
.................................................................................................TATTACACTTGTCCCGGCCTGTT............................................................ 23 1 1 6.00 6 4 2 0 0 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTTTTT......................................................... 26 3 1 6.00 6 3 1 2 0 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTCT............................................................. 22 1 2 6.00 12 11 1 0 0 0 0
.................................................................................................CATTGCACTTGTCCCGGTCTGT............................................................. 22 2 2 6.00 12 6 4 1 1 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGGT............................................................ 23 1 1 6.00 6 3 2 1 0 0 0
..................................................................................................ATTGCACTTGTCCCGGCCTGTAAA.......................................................... 24 2 2 6.00 12 3 3 3 2 1 0
................................................................................................CTATTGCACTTGTCCCGGCCTGTA............................................................ 24 2 2 6.00 12 5 6 1 0 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTTATT......................................................... 26 3 1 6.00 6 1 3 1 0 1 0
...............................................................................................CATATTGCACTTGTCCCGGCCTGT............................................................. 24 2 2 6.00 12 7 5 0 0 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTAG............................................................. 22 2 2 6.00 12 1 3 0 8 0 0
.................................................................................................CATTGCACTTGTCTCGGCCTGAT............................................................ 23 3 2 6.00 12 5 6 0 1 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTTAAC......................................................... 26 2 1 6.00 6 0 0 1 5 0 0
.................................................................................................TACTGCACTTGTCCCGGCCTGTT............................................................ 23 1 1 6.00 6 3 3 0 0 0 0
..............................................................................................TTATATTGCACTTGTCCCGGCCTGT............................................................. 25 2 1 6.00 6 4 2 0 0 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTCA........................................................... 24 2 2 6.00 12 4 3 5 0 0 0
.................................................................................................TATTGCACTTGTCTCGGCCTG.............................................................. 21 1 2 6.00 12 4 4 0 4 0 0
.................................................................................................TATTGCACTTGTCCTGGCCTG.............................................................. 21 1 2 5.50 11 4 4 0 2 0 1
.................................................................................................TATTGCAATTGTCCCGGCCTGT............................................................. 22 1 2 5.50 11 7 3 0 1 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTAAAGA........................................................ 27 3 1 5.00 5 3 1 1 0 0 0
.................................................................................................TATTGCATTTGTCCCGGCCT............................................................... 20 1 2 5.00 10 1 0 0 9 0 0
.................................................................................................TATTGCACTTATCCCGGCCTGTT............................................................ 23 1 1 5.00 5 4 1 0 0 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTAAAGC........................................................ 27 3 1 5.00 5 0 0 0 5 0 0
.................................................................................................TATTGCACTTGGCCCGGCCTGT............................................................. 22 1 2 5.00 10 2 0 0 8 0 0
.................................................................................................TATTTCACTTGTCCCGGCCTGTT............................................................ 23 1 1 5.00 5 3 1 0 1 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTCT........................................................... 24 2 2 5.00 10 2 3 3 2 0 0
.................................................................................................TATTGCACTCGTCCCGGCCTAAT............................................................ 23 3 2 5.00 10 1 0 0 8 0 1
.................................................................................................TATTGCACTCGTCCCGGCCTCTT............................................................ 23 2 2 5.00 10 3 1 1 4 0 1
.................................................................................................TATTGCACTTGTCCCGGCCTGTCAAGC........................................................ 27 3 1 5.00 5 0 0 0 5 0 0
.................................................................................................TATTGCACTTGTTCCGGCCTGTA............................................................ 23 2 2 5.00 10 1 2 1 6 0 0
..................................................................................................ATTGCACTTGTCCCGGCC................................................................ 18 0 2 5.00 10 4 2 1 3 0 0
.................................................................................................TATTGCACTTGTCCCGGCATGT............................................................. 22 1 2 5.00 10 6 3 0 1 0 0
.................................................................................................TATTGCACTTGTCCCGGCAT............................................................... 20 1 2 4.50 9 2 3 0 4 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGCAA........................................................... 24 3 2 4.50 9 1 2 2 1 1 2
.................................................................................................TATTGAACTTGTCCCGGCCTGT............................................................. 22 1 2 4.50 9 7 2 0 0 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTTTA............................................................ 23 2 2 4.50 9 5 1 0 2 0 1
.................................................................................................TATTGTACTTGTCCCGGCCTGTA............................................................ 23 2 2 4.50 9 1 5 1 1 1 0
..................................................................................................ATTGCACTTGTCCCGGCCTGTTAT.......................................................... 24 2 1 4.00 4 1 1 2 0 0 0
..................................................................................................ACTGGACTTGTCCCGGCCTGT............................................................. 21 2 2 4.00 8 3 5 0 0 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGCAT........................................................... 24 3 2 4.00 8 1 0 0 6 0 1
.................................................................................................TATTGCACTTGTCCCGGCCGGT............................................................. 22 1 2 4.00 8 3 0 0 5 0 0
..................................................................................................ATTGCACTTGTCCCGGCCTGTAAT.......................................................... 24 3 2 4.00 8 1 2 4 1 0 0
.................................................................................................TATTGCACTTGTTTCGGCCTGT............................................................. 22 2 2 4.00 8 2 2 0 3 0 1
.................................................................................................TATTGCACTTGTCCCGGCCTTTTT........................................................... 24 2 1 4.00 4 0 0 0 4 0 0
.................................................................................................TATTCCACTTGTCCCGGCCTGTT............................................................ 23 1 1 4.00 4 3 1 0 0 0 0
.................................................................................................TATTGCACTTGCCCCGGCCTGTT............................................................ 23 1 1 4.00 4 1 1 0 2 0 0
............................................................AGGTTGGGATCGGTTGCAAT.................................................................................................... 20 0 1 4.00 4 0 0 0 4 0 0
...................................................................................................TTGCACTTGTCCCGGCCTGTTTA.......................................................... 23 1 1 4.00 4 2 2 0 0 0 0
.................................................................................................TATTGCGCTTGTCCCGGCCTGTT............................................................ 23 1 1 4.00 4 2 1 1 0 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTTAA............................................................ 23 3 2 4.00 8 0 0 0 8 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTAAA............................................................ 23 3 2 4.00 8 3 0 0 5 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTCAAC......................................................... 26 3 2 4.00 8 0 0 0 7 0 1
.................................................................................................TATTGCACTTTTCCCGGCCTGTT............................................................ 23 1 1 4.00 4 3 0 1 0 0 0
................................................................................................CTATTGCACTTGTCCCGGCCTG.............................................................. 22 1 2 4.00 8 5 3 0 0 0 0
.................................................................................................TATTGCACTTCTCCCGGCCTGTT............................................................ 23 1 1 4.00 4 1 2 1 0 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTTGAGC........................................................ 27 1 1 4.00 4 0 0 0 4 0 0
.................................................................................................TATTGCACTTGTCCCGGCTTGTAT........................................................... 24 3 2 4.00 8 0 0 0 8 0 0
..................................................................................................ATTGCACTTGTCTCGGTCT............................................................... 19 2 15 3.93 59 21 12 0 23 1 2
.................................................................................................TATTGCACTTGTCCCGGA................................................................. 18 1 3 3.67 11 5 6 0 0 0 0
..................................................................................................ATTGCACTTGTCCCGGCCTGAA............................................................ 22 2 2 3.50 7 0 4 1 2 0 0
.................................................................................................TATTGCATTTGTCCCGGCCTGTA............................................................ 23 2 2 3.50 7 2 1 0 4 0 0
.................................................................................................TATTACACTTGTCCCGGCCTGTA............................................................ 23 2 2 3.50 7 4 3 0 0 0 0
..................................................................................................ATTGCACTTATCCCGGCCTGT............................................................. 21 1 2 3.50 7 3 3 0 1 0 0
.................................................................................................TATTGCACTTGTCCCG................................................................... 16 0 2 3.50 7 3 2 0 1 0 1
...................................................................................................TTGCACTTGTCCCGGCCTGTAA........................................................... 22 2 2 3.50 7 2 0 4 1 0 0
.................................................................................................TATTGCACTTGTCCCGGACTGT............................................................. 22 1 2 3.50 7 3 1 0 3 0 0
.................................................................................................TATTGCACTTGTCCCGGCT................................................................ 19 1 2 3.50 7 3 2 1 1 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTCGATC........................................................ 27 3 2 3.50 7 0 0 0 7 0 0
.................................................................................................TATTGCAGTTGTCCCGGCCTGT............................................................. 22 1 2 3.50 7 5 1 0 1 0 0
..................................................................................................ATTGCACTTGTCCCGGCCTGC............................................................. 21 1 2 3.50 7 2 2 1 1 1 0
.................................................................................................TATTGCACTTGTCTCGGTCT............................................................... 20 2 3 3.33 10 3 3 0 4 0 0
.................................................................................................TATTGCACTTGTCTCGGCCTGTA............................................................ 23 2 3 3.33 10 4 2 0 4 0 0
.................................................................................................TATTGCACTTGTCCCGGCCAT.............................................................. 21 2 3 3.33 10 1 1 0 8 0 0
...................................................................................................TTGCACTTGTCCCGGCCTGTAT........................................................... 22 2 5 3.20 16 6 9 1 0 0 0
............................................................AGGTTGGGATCGGTTGCAATGCA................................................................................................. 23 1 1 3.00 3 0 1 0 2 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTTTTTT........................................................ 27 3 1 3.00 3 2 1 0 0 0 0
.................................................................................................TATTGCACTTGTCCCGTCCTG.............................................................. 21 1 2 3.00 6 1 0 1 3 0 1
.................................................................................................TATTGCACTCGTCCCGGCCTGTTT........................................................... 24 2 1 3.00 3 1 1 0 1 0 0
.................................................................................................TATTGCACATGTCCCGGCCTGTT............................................................ 23 1 1 3.00 3 1 2 0 0 0 0
.................................................................................................TATTGCCCTTGTCCCGGCCT............................................................... 20 1 2 3.00 6 0 0 0 5 0 1
.................................................................................................TATTGCACTCGTCCCGGCCTTTTT........................................................... 24 3 1 3.00 3 0 0 0 3 0 0
.................................................................................................TATTGCACTTGTCTCGGTCTGTT............................................................ 23 2 1 3.00 3 2 0 0 0 1 0
.................................................................................................TATTGCACTTGTCCCAGCCTGTA............................................................ 23 2 2 3.00 6 4 1 1 0 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTAAAGT........................................................ 27 2 1 3.00 3 1 1 0 0 1 0
..................................................................................................ATTGCACTTGTCCCGGCCTGTTGAAC........................................................ 26 2 2 3.00 6 0 0 0 6 0 0
.................................................................................................TATTGCACTTGTCCCGGCTTG.............................................................. 21 1 2 3.00 6 0 0 0 6 0 0
............................................................AGGTTGGGATCGGTTGCAA..................................................................................................... 19 0 1 3.00 3 0 0 0 2 0 1
.................................................................................................TATCGCACTTGTCCCGGCCTGTA............................................................ 23 2 2 3.00 6 3 0 1 2 0 0
.................................................................................................TGTTGCACTTGTCCCGGCCTGTT............................................................ 23 1 1 3.00 3 1 2 0 0 0 0
.................................................................................................TATTGCACTTGTCCCGGCTTGTT............................................................ 23 1 1 3.00 3 0 0 0 3 0 0
............................................................AGGTTGGGATCGGTTGCAATGTT................................................................................................. 23 1 1 3.00 3 0 0 0 3 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTTTAT......................................................... 26 2 1 3.00 3 0 1 1 0 1 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTTTC.......................................................... 25 2 1 3.00 3 1 1 0 0 1 0
.................................................................................................TATTGCACTTTTCCCGGCCT............................................................... 20 1 2 3.00 6 0 0 0 6 0 0
.................................................................................................TATTGCACTTGTTCCGGCCTGTTT........................................................... 24 2 1 3.00 3 2 0 1 0 0 0
.................................................................................................TATTGCCCTTGTCCCGGCCTGTT............................................................ 23 1 1 3.00 3 2 1 0 0 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTTGAAAC....................................................... 28 3 2 3.00 6 0 0 0 6 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTTTAAT........................................................ 27 2 1 3.00 3 0 0 2 0 1 0
.................................................................................................TATTGCACTTGTCTCGGCCT............................................................... 20 1 2 3.00 6 0 0 0 6 0 0
.................................................................................................TATTGCACTTGTCCCCGCCTGTT............................................................ 23 1 1 3.00 3 0 1 2 0 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTTCT............................................................ 23 2 1 3.00 3 2 0 0 1 0 0
........................................................................................................CTTGTCCCGGCCTGT............................................................. 15 0 7 2.86 20 14 5 0 0 1 0
.................................................................................................TATTGCACTCGTCCCGGCCTG.............................................................. 21 1 3 2.67 8 4 1 1 2 0 0
.................................................................................................TATTGCACTTGTCCCGGTCTGTA............................................................ 23 2 2 2.50 5 2 2 0 1 0 0
.................................................................................................TATTGTACTTGTCCCGGCCTG.............................................................. 21 1 2 2.50 5 0 2 0 3 0 0
.................................................................................................TATTGCGCTTGTCCCGGCCTG.............................................................. 21 1 2 2.50 5 1 3 0 1 0 0
.................................................................................................TATTGCACTTGTCGCGGCCTGT............................................................. 22 1 2 2.50 5 4 0 1 0 0 0
..................................................................................................ATTGCCCTTGTCCCGGCCTGT............................................................. 21 1 2 2.50 5 2 2 0 0 0 1
..................................................................................................ATTGCACTCGTCCCGGCCTGT............................................................. 21 1 2 2.50 5 3 2 0 0 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTGGAGC........................................................ 27 2 2 2.50 5 0 0 0 5 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTATAT......................................................... 26 3 2 2.50 5 2 0 2 0 0 1
.................................................................................................TATTGCACTTGCCCCGGCCTGTA............................................................ 23 2 2 2.50 5 3 0 0 2 0 0
.................................................................................................TATTGCACTTGTCCCGGCCTGTAAAAT........................................................ 27 3 2 2.50 5 1 0 1 0 3 0
.................................................................................................TATTGCACTTGTCCCGGCCCGTA............................................................ 23 2 2 2.50 5 3 2 0 0 0 0
...................................................................................................TTGCACTTGTCCCGGCCTG.............................................................. 19 0 2 2.50 5 4 1 0 0 0 0
..................................................................................................ATCGCACTTGTCCCGGCCTGT............................................................. 21 1 2 2.50 5 0 5 0 0 0 0
....................................................................................................TGCACTTGTCCCGGCCTGT............................................................. 19 0 2 2.50 5 4 0 1 0 0 0
.................................................................................................TATTGCACTTATCCCGGCCTG.............................................................. 21 1 2 2.50 5 1 4 0 0 0 0
.................................................................................................TATTGCACTTGTCCCGACCTGTA............................................................ 23 2 2 2.50 5 2 1 0 2 0 0
.................................................................................................CATTGCACTTGTCCCGGCCTGC............................................................. 22 2 2 2.50 5 2 2 0 1 0 0
................................................................................................CTATTGCACTTGTCCCGGCCTGTAA........................................................... 25 3 2 2.50 5 1 2 0 0 2 0
.................................................................................................TATTGCACTTGTCCCGGCCTGAAGA.......................................................... 25 2 2 2.50 5 2 1 1 1 0 0
.................................................................................................TATTGCACTTATCCCGGCCTGTA............................................................ 23 2 2 2.50 5 2 2 1 0 0 0
.................................................................................................TATTGCACTTGTTCCGGCCTG.............................................................. 21 1 2 2.50 5 1 1 1 2 0 0
..................................................................................................ATTGCACTTGTCTCGGCCTGT............................................................. 21 1 3 2.33 7 3 3 0 1 0 0
..................................................................................................ATTGCACTTGTCTCGGCCTGA............................................................. 21 2 3 2.33 7 4 2 0 1 0 0
.................................................................................................GATTGCACTTGTCCCGGCCTGTT............................................................ 23 1 1 2.00 2 0 2 0 0 0 0

Anti-sense strand reads

GACTGACACCATCACTTTTCAGACATCTTTTCATTCCCTTTTAGTTTGGGGAAAGATGTGTCCAACCCTAGCCAACGTTACGACACAAAGACATACCATAACGTGAACAGGGCCGGACAACTCAAACCACCCCTAACACTGGTCTTCTAAAACTTTTAATTTATAATGACTTCTAAGCTG

**********************************************..((((...((..((((((((((((.(((.(((((((((((......)))))))))))))).))))))))))))..))......)))).********************************************* 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:24 AM