ID:

ssc-mir-708

 Coordinate:

chr9:15120477-15120556 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-1.2

Sense Strand Reads

tgggttgggggtTGGTTGGgGtGGGtgGGgTGTGTGTGtTGTGGTttgTGgggTgttGGtGgTTtgttTgTtGgTGGGGGTGttTGtgTTGgtgtTGttgGCAtgTtGtgTGTGtGgTTgTtGtGGGgtGGGtggTTtgggTttGTgtTgTgTgTTgTgtgggTGgtgtgggTgggTGtG

****************************************....................................((.(((((...............))))).))...............................****************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR139075

testes		 SRR066809

ovary		 SRR066810

testes		 SRR139076

testes		 SRR1274764

testes		 SRR1274763

ovary
.......................................................AAGGAGCTTACAATCTAGCTGGG...................................................................................................... 23 0 1 9008.00 9008 4599 2084 1996 183 76 70
.......................................................AAGGAGCTTACAATCTAGCTGG....................................................................................................... 22 0 1 8092.00 8092 5385 1296 1194 164 30 23
.......................................................AAGGAGCTTACAATCTAGCTGGA...................................................................................................... 23 1 1 1031.00 1031 824 93 84 14 6 10
.....................................................................................................CAACTAGACTGTGAGCTTCTAG......................................................... 22 0 1 958.00 958 64 463 403 2 20 6
......................................................................................................AACTAGACTGTGAGCTTCTAGA........................................................ 22 0 1 729.00 729 144 291 285 3 4 2
.......................................................AAGGAGCTTACAATCTAGCTGGGT..................................................................................................... 24 1 1 608.00 608 186 206 182 10 15 9
.....................................................................................................CAACTAGACTGTGAGCTTCTAGT........................................................ 23 1 1 528.00 528 3 278 240 0 5 2
......................................................................................................AACTAGACTGTGAGCTTCTAG......................................................... 21 0 1 453.00 453 25 222 198 0 7 1
.....................................................................................................CAACTAGACTGTGAGCTTCTAGA........................................................ 23 0 1 387.00 387 92 152 118 2 20 3
.......................................................AAGGAGCTTACAATCTAGCTGGGA..................................................................................................... 24 1 2 328.00 656 131 243 231 10 26 15
.......................................................AAGGAGCTTACAATCTAGCTGGT...................................................................................................... 23 1 1 311.00 311 229 33 37 5 3 4
.......................................................AAGGAGCTTACAATCTAGCTG........................................................................................................ 21 0 1 280.00 280 228 21 14 7 4 6
.......................................................AAGGAGCTTACAATCTAGCT......................................................................................................... 20 0 1 259.00 259 194 26 20 6 9 4
.......................................................................................................ACTAGACTGTGAGCTTCTAGA........................................................ 21 0 1 120.00 120 17 57 46 0 0 0
.......................................................................................................ACTAGACTGTGAGCTTCTAG......................................................... 20 0 1 112.00 112 0 60 52 0 0 0
........................................................AGGAGCTTACAATCTAGCTGG....................................................................................................... 21 0 1 101.00 101 53 29 19 0 0 0
......................................................................................................AACTAGACTGTGAGCTTCTAGT........................................................ 22 1 1 98.00 98 2 49 46 0 1 0
.......................................................AAGGAGCTTACAATCTAGCTGA....................................................................................................... 22 1 3 88.33 265 249 9 3 4 0 0
........................................................AGGAGCTTACAATCTAGCTGGG...................................................................................................... 22 0 1 86.00 86 29 24 26 5 0 2
.......................................................AAGGAGCTTACAATCTAGCTGT....................................................................................................... 22 1 1 78.00 78 64 5 4 4 1 0
.....................................................................................................CAACTAGACTGTGAGCTTCTA.......................................................... 21 0 1 59.00 59 16 20 20 0 2 1
.......................................................AAGGAGCTTACAATCTAGC.......................................................................................................... 19 0 2 58.50 117 93 5 4 1 4 10
.......................................................AAGGAGCTTACAATCTAGCTGGGTT.................................................................................................... 25 2 1 55.00 55 17 18 18 2 0 0
.....................................................................................................CAACTAGACTGTGAGCTTCT........................................................... 20 0 2 53.00 106 12 40 47 2 4 1
.......................................................AGGGAGCTTACAATCTAGCTGGG...................................................................................................... 23 1 1 23.00 23 17 4 1 1 0 0
..............................................................................GGTGAATGACTTGCACATGAACG............................................................................... 23 0 1 23.00 23 17 3 3 0 0 0
.......................................................AAGGAGCTTACAATCTAGCTGGGAT.................................................................................................... 25 2 3 22.00 66 10 20 15 0 17 4
......................................................CAAGGAGCTTACAATCTAGCTGGG...................................................................................................... 24 0 1 22.00 22 10 7 5 0 0 0
.......................................................AAGGAGCTTACAATCTCGCTGG....................................................................................................... 22 1 1 22.00 22 19 2 0 0 0 1
.......................................................AAGGCGCTTACAATCTAGCTGG....................................................................................................... 22 1 1 20.00 20 18 1 1 0 0 0
.......................................................ACGGAGCTTACAATCTAGCTGG....................................................................................................... 22 1 1 19.00 19 16 1 0 2 0 0
......................................................................................................AACTAGACTGTGAGCTTCT........................................................... 19 0 2 18.00 36 3 16 15 0 2 0
.......................................................AAGGAGCTTACAATCTAGCTGGGG..................................................................................................... 24 0 1 16.00 16 13 2 1 0 0 0
.......................................................AAGGAGCTTACAATCTAGCTGGGC..................................................................................................... 24 1 1 16.00 16 5 8 1 0 0 2
.......................................................AAGGGGCTTACAATCTAGCTGG....................................................................................................... 22 1 1 15.00 15 13 1 0 1 0 0
.......................................................AAGGAGCTTACAATCTAGCTGGGTA.................................................................................................... 25 2 2 13.50 27 13 9 4 1 0 0
.......................................................................................................ACTAGACTGTGAGCTTCTAGAG....................................................... 22 0 1 13.00 13 0 6 7 0 0 0
.......................................................ACGGAGCTTACAATCTAGCTGGG...................................................................................................... 23 1 1 12.00 12 11 0 0 1 0 0
.......................................................AAGGCGCTTACAATCTAGCTGGG...................................................................................................... 23 1 1 11.00 11 8 0 0 3 0 0
.......................................................AAGGAGCTTACCATCTAGCTGGG...................................................................................................... 23 1 1 11.00 11 9 2 0 0 0 0
.......................................................AAGGAGCTTCCAATCTAGCTGG....................................................................................................... 22 1 1 10.00 10 10 0 0 0 0 0
.......................................................AAGGAGCTTACAATCTAGCTGGGAAT................................................................................................... 26 2 2 10.00 20 0 12 7 0 1 0
.......................................................AAGGAGCTTACAATCTAGCTGGGTAT................................................................................................... 26 2 1 10.00 10 1 3 5 0 0 1
.......................................................AAGGAGCTTACAATCTCGCTGGG...................................................................................................... 23 1 1 10.00 10 10 0 0 0 0 0
.......................................................AAGGAGCTTACCATCTAGCTGG....................................................................................................... 22 1 1 10.00 10 10 0 0 0 0 0
......................................................................................................AACTAGACTGTGAGCTTCTAGAA....................................................... 23 1 2 9.50 19 14 3 1 1 0 0
.......................................................AAGGAGCTTACAATCTAGCTGGGTTT................................................................................................... 26 2 1 9.00 9 2 4 2 0 1 0
.......................................................AAGGAGCTTACAATCTAGCTGGGATT................................................................................................... 26 2 1 9.00 9 0 4 3 0 1 1
..........................................................GAGCTTACAATCTAGCTGGG...................................................................................................... 20 0 1 9.00 9 2 4 3 0 0 0
......................................................................................................AGCTAGACTGTGAGCTTCTAGA........................................................ 22 1 2 9.00 18 13 5 0 0 0 0
........................................................AGGAGCTTACAATCTAGCTGGA...................................................................................................... 22 1 1 9.00 9 6 1 2 0 0 0
.......................................................AAGGAGCTTACAATCTAGCTGGC...................................................................................................... 23 1 2 8.50 17 13 3 1 0 0 0
..............................................................................GGTAAATGACTTGCACTTGAAC................................................................................ 22 2 6 8.17 49 0 22 27 0 0 0
.......................................................AAGGAGCCTACAATCTAGCTGGG...................................................................................................... 23 1 1 8.00 8 4 1 2 1 0 0
.......................................................AAGGAGCTTCCAATCTAGCTGGG...................................................................................................... 23 1 1 8.00 8 8 0 0 0 0 0
.......................................................TAGGAGCTTACAATCTAGCTGG....................................................................................................... 22 1 1 8.00 8 4 1 3 0 0 0
......................................................................................................AACTAGACTGTGAGCTTCTA.......................................................... 20 0 1 8.00 8 2 3 2 0 1 0
.......................................................AGGGAGCTTACAATCTAGCTGG....................................................................................................... 22 1 3 7.67 23 19 2 1 1 0 0
.......................................................AAGGAGCTTACAATCTAGCTGGGTTTT.................................................................................................. 27 3 1 7.00 7 1 4 2 0 0 0
.......................................................AAGGAGCTTACAATCTAGCGGG....................................................................................................... 22 1 1 6.00 6 6 0 0 0 0 0
.......................................................CAGGAGCTTACAATCTAGCTGGG...................................................................................................... 23 1 2 6.00 12 12 0 0 0 0 0
........................................................AGGAGCTTACAATCTAGCTGGGT..................................................................................................... 23 1 1 6.00 6 1 2 3 0 0 0
.....................................................................................................CAACTAGACTGTGAGCTTCTAGAA....................................................... 24 1 1 6.00 6 5 0 1 0 0 0
.......................................................AAGGAGCTTACAATCTGGCTGGG...................................................................................................... 23 1 1 6.00 6 5 0 1 0 0 0
...................................................................................................CACAACTAGACTGTGAGCTTCT........................................................... 22 1 1 6.00 6 0 2 4 0 0 0
.......................................................AAGGAGCTTACAATCTAGCTGGAT..................................................................................................... 24 2 3 6.00 18 9 2 5 0 1 1
.......................................................AAGGAGCTTACAATCTAGCTGTG...................................................................................................... 23 1 1 6.00 6 6 0 0 0 0 0
.......................................................AAGGAGCTTACAACCTAGCTGG....................................................................................................... 22 1 1 6.00 6 3 2 1 0 0 0
.......................................................AAGGAGCTTACAATCTAG........................................................................................................... 18 0 8 5.88 47 44 0 1 1 1 0
.......................................................AAGGAGCTTACACTCTAGCTGG....................................................................................................... 22 1 3 5.67 17 16 0 0 1 0 0
........................................................AGGAGCTTACAATCTAGCTG........................................................................................................ 20 0 1 5.00 5 4 0 1 0 0 0
.......................................................AAGGTGCTTACAATCTAGCTGG....................................................................................................... 22 1 1 5.00 5 4 1 0 0 0 0
.......................................................AAGGAGCTTACGATCTAGCTGG....................................................................................................... 22 1 1 5.00 5 5 0 0 0 0 0
.......................................................AAGGAGCTTGCAATCTAGCTGGG...................................................................................................... 23 1 1 5.00 5 2 3 0 0 0 0
.......................................................AAGGAGCTTACAATCTAGCTAG....................................................................................................... 22 1 1 5.00 5 4 1 0 0 0 0
...........................................................AGCTTACAATCTAGCTGG....................................................................................................... 18 0 1 5.00 5 0 4 1 0 0 0
.......................................................AAGGGGCTTACAATCTAGCTGGG...................................................................................................... 23 1 1 5.00 5 3 1 1 0 0 0
............................................................................................ACATGAACGCAACTAGACTGTGAGCTTCTAGA........................................................ 32 0 1 5.00 5 0 3 2 0 0 0
.......................................................AAGGAGCTTACAATCTAGCTAGG...................................................................................................... 23 1 1 5.00 5 3 0 2 0 0 0
.......................................................CAGGAGCTTACAATCTAGCTGG....................................................................................................... 22 1 2 5.00 10 10 0 0 0 0 0
.......................................................AAGGAGCATACAATCTAGCTGG....................................................................................................... 22 1 1 5.00 5 4 0 1 0 0 0
.......................................................AAGGAGCTTACACTCTAGCTGGG...................................................................................................... 23 1 2 4.50 9 9 0 0 0 0 0
.......................................................AAGGAGCTTATAATCTAGCTGG....................................................................................................... 22 1 2 4.50 9 6 1 2 0 0 0
...................................GTGATGTGGTAACTGCCCTC............................................................................................................................. 20 0 1 4.00 4 0 0 4 0 0 0
.....................................................................................................CAGCTAGACTGTGAGCTTCTAG......................................................... 22 1 2 4.00 8 2 6 0 0 0 0
......................................................CAAGGAGCTTACAATCTAGCTGG....................................................................................................... 23 0 1 4.00 4 1 2 1 0 0 0
.......................................................AAGGAACTTACAATCTAGCTGG....................................................................................................... 22 1 1 4.00 4 3 1 0 0 0 0
.......................................................AAGGAGCTTACAATCTATCTGG....................................................................................................... 22 1 1 4.00 4 4 0 0 0 0 0
.......................................................AAGGAGCTTACAATCTAGCTGTT...................................................................................................... 23 2 1 4.00 4 4 0 0 0 0 0
.......................................................GAGGAGCTTACAATCTAGCTGGG...................................................................................................... 23 1 2 4.00 8 5 2 1 0 0 0
.......................................................AAGGAGCTTACGATCTAGCTGGG...................................................................................................... 23 1 1 4.00 4 2 2 0 0 0 0
.......................................................AAGGAGCTTACAATCTACCTGGG...................................................................................................... 23 1 1 4.00 4 2 2 0 0 0 0
.....................................................................................................CAACTAGACTGTGAGCTTCTAT......................................................... 22 1 1 4.00 4 1 1 1 0 1 0
.......................................................TAGGAGCTTACAATCTAGCTGGG...................................................................................................... 23 1 1 4.00 4 2 0 2 0 0 0
.......................................................AAGGAACTTACAATCTAGCTGGG...................................................................................................... 23 1 1 4.00 4 4 0 0 0 0 0
..............................................................................GGTGAATGACTTGCACATGAAC................................................................................ 22 0 1 4.00 4 2 2 0 0 0 0
.......................................................AAGGAGCTTACAATCTAGCCGGG...................................................................................................... 23 1 2 4.00 8 4 0 4 0 0 0
.......................................................AAGGAGCTTATAATCTAGCTGGG...................................................................................................... 23 1 2 4.00 8 6 0 2 0 0 0
.....................................................................................................CAGCTAGACTGTGAGCTTCTAGA........................................................ 23 1 2 3.50 7 2 3 2 0 0 0
......................................................................................................AGCTAGACTGTGAGCTTCTAG......................................................... 21 1 2 3.50 7 0 3 3 1 0 0
.......................................................AAGGAGCTTGCAATCTAGCTGG....................................................................................................... 22 1 1 3.00 3 2 0 1 0 0 0
.......................................................AAGGGGCTTACAATCTAGCTGGA...................................................................................................... 23 2 1 3.00 3 2 1 0 0 0 0
......................................................................................................AACCAGACTGTGAGCTTCTAGA........................................................ 22 1 1 3.00 3 2 1 0 0 0 0
......................................................................................................AACTAGACTGTGAGCTTCTAGAT....................................................... 23 1 1 3.00 3 0 2 1 0 0 0
.......................................................AAGGAGCGTACAATCTAGCTGGG...................................................................................................... 23 1 1 3.00 3 3 0 0 0 0 0
.......................................................AAGCAGCTTACAATCTAGCTGG....................................................................................................... 22 1 1 3.00 3 2 0 1 0 0 0
......................................................................................................AACTAGACTGTGAGCTTCTAT......................................................... 21 1 1 3.00 3 0 1 2 0 0 0
......................................................CAAGGAGCTTACAATCTAGCTGGGA..................................................................................................... 25 1 2 3.00 6 0 4 2 0 0 0
.......................................................AAGTAGCTTACAATCTAGCTGGG...................................................................................................... 23 1 2 3.00 6 4 2 0 0 0 0
.......................................................AAGGAGCTTACAATCTAGCTGGGTTA................................................................................................... 26 3 1 3.00 3 1 2 0 0 0 0
.......................................................ATGGAGCTTACAATCTAGCTGGG...................................................................................................... 23 1 1 3.00 3 1 0 1 1 0 0
.......................................................AAGGAGCTTACAATCTAGCTTGG...................................................................................................... 23 1 1 3.00 3 2 1 0 0 0 0
.......................................................AAGGATCTTACAATCTAGCTGGG...................................................................................................... 23 1 1 3.00 3 1 0 1 1 0 0
.......................................................AAAGAGCTTACAATCTAGCTGGG...................................................................................................... 23 1 1 3.00 3 1 1 1 0 0 0
.......................................................AAGGAGCTTACAATCTAGCTGGGAGA................................................................................................... 26 2 1 3.00 3 2 1 0 0 0 0
......................................................AAAGGAGCTTACAATCTAGCTGG....................................................................................................... 23 1 1 3.00 3 2 1 0 0 0 0
......................................................CAAGGAGCTTACAATCTAGCTGGA...................................................................................................... 24 1 1 3.00 3 0 2 1 0 0 0
........................................................AGGAGCTTACAATCTAGCT......................................................................................................... 19 0 1 3.00 3 3 0 0 0 0 0
.......................................................AAGGAGCTTACAATCTAGCTGGAA..................................................................................................... 24 2 8 2.63 21 18 1 1 0 1 0
.......................................................GAGGAGCTTACAATCTAGCTGG....................................................................................................... 22 1 2 2.50 5 3 1 1 0 0 0
.......................................................AAGGAGCTTACAATCTAGCTGAG...................................................................................................... 23 1 2 2.50 5 2 1 2 0 0 0
.......................................................AAGGAGCTTACAATCTGGCTGG....................................................................................................... 22 1 2 2.50 5 4 1 0 0 0 0
.......................................................................................................ACTAGACTGTGAGCTTCTAGAGT...................................................... 23 1 2 2.50 5 0 3 2 0 0 0
........................................................AGGAGCTTACAATCTAGCTGGGA..................................................................................................... 23 1 2 2.50 5 0 2 3 0 0 0
..........................................................GAGCTTACAATCTAGCTGGGA..................................................................................................... 21 1 2 2.50 5 3 1 1 0 0 0
.....................................................TCAAGGAGCTTACAATCTAGCT......................................................................................................... 22 0 1 2.00 2 0 1 1 0 0 0
.......................................................AAGGAGCTTACAATCTCGCTGGA...................................................................................................... 23 2 1 2.00 2 2 0 0 0 0 0
.......................................................AAAGAGCTTACAATCTAGCTGG....................................................................................................... 22 1 1 2.00 2 1 1 0 0 0 0
.......................................................AAGGAGCTTACAATTTAGCTGGG...................................................................................................... 23 1 2 2.00 4 3 0 1 0 0 0
.......................................................AAGGAGCTTACTATCTAGCTGGG...................................................................................................... 23 1 2 2.00 4 0 1 2 1 0 0
.......................................................AAGGATCTTACAATCTAGCTGG....................................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0
.......................................................AAGGAGCTTACAATCTAGCTGGGACTC.................................................................................................. 27 3 1 2.00 2 2 0 0 0 0 0
.......................................................AAGGAGCTTACAATCTATCTGGG...................................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0
.......................................................AAGGAGCTTACAATCTAGCTGGGATTT.................................................................................................. 27 3 1 2.00 2 0 0 1 0 0 1
......................................................................................................AACTAGACTGCGAGCTTCTAG......................................................... 21 1 1 2.00 2 1 0 1 0 0 0
.........................................................GGAGCTTACAATCTAGCTGGG...................................................................................................... 21 0 1 2.00 2 0 0 2 0 0 0
.......................................................AAGGAGCTTACAGTCTAGCTGGG...................................................................................................... 23 1 3 2.00 6 4 1 1 0 0 0
.......................................................................................................ACTAGACTGTGAGCTTCTAGT........................................................ 21 1 1 2.00 2 0 2 0 0 0 0
.......................................................AATGAGCTTACAATCTAGCTGG....................................................................................................... 22 1 1 2.00 2 1 1 0 0 0 0
.......................................................AAGGAGCTTACAATCTAGCTCGG...................................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0
.......................................................AAGGAGCTTAGAATCTAGCTGGG...................................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0
.......................................................AAGGAGCCTACAATCTAGCTGG....................................................................................................... 22 1 1 2.00 2 1 1 0 0 0 0
......................................................AAAGGAGCTTACAATCTAGCTGGG...................................................................................................... 24 1 1 2.00 2 1 0 1 0 0 0
.......................................................AAGGAGCTTACAAACTAGCTGGG...................................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0
.......................................................AAGGAGCTTACAATCTAGCTGGGGG.................................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0
.......................................................AAGGAGCTTACAATCTAGCTGGTT..................................................................................................... 24 2 1 2.00 2 0 2 0 0 0 0
.......................................................AAGGAGCTTACAATCCAGCTGGG...................................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0
..........................................................GAGCTTACAATCTAGCTGG....................................................................................................... 19 0 1 2.00 2 0 0 2 0 0 0
....................................TGATGTGGTAACTGCCCTC............................................................................................................................. 19 0 1 2.00 2 0 2 0 0 0 0
......................................................................................................AACTAGACTGTGAGCTTC............................................................ 18 0 3 2.00 6 0 4 1 0 1 0
.......................................................AAGGAGCTTACAATCTAGCTGGGGGTAAT................................................................................................ 29 2 1 2.00 2 0 2 0 0 0 0
.......................................................AAGGAGCTTACAATCTAGCTGGGAC.................................................................................................... 25 2 2 2.00 4 0 0 4 0 0 0
.......................................................AAGGCGCTTACAATCTAGCTGGGT..................................................................................................... 24 2 1 2.00 2 0 0 1 1 0 0
.......................................................AAGGAGCTCACAATCTAGCTGGG...................................................................................................... 23 1 3 1.67 5 3 1 1 0 0 0
.......................................................................................................ACTAGACTGTGAGCTTCTAGAGA...................................................... 23 1 2 1.50 3 0 2 1 0 0 0
.......................................................AAGGAGCTTTCAATCTAGCTGG....................................................................................................... 22 1 2 1.50 3 3 0 0 0 0 0
.......................................................AAGGAGCTTACAATCCAGCTGG....................................................................................................... 22 1 2 1.50 3 1 1 1 0 0 0
.......................................................AAGGAGCTTACAATCTAGCTT........................................................................................................ 21 1 2 1.50 3 3 0 0 0 0 0
.......................................................AAGGAGCTTACAATCTAGCTA........................................................................................................ 21 1 2 1.50 3 2 0 1 0 0 0
....................................................................................................CCAACTAGACTGTGAGCTTCTAGT........................................................ 24 2 2 1.50 3 0 3 0 0 0 0
.......................................................AAGTAGCTTACAATCTAGCTGG....................................................................................................... 22 1 2 1.50 3 1 2 0 0 0 0
.......................................................AAGGAGCTTACAATGTAGCTGG....................................................................................................... 22 1 2 1.50 3 3 0 0 0 0 0
.......................................................AAGGAGCTTACAATCTAGCCGG....................................................................................................... 22 1 2 1.50 3 3 0 0 0 0 0
.......................................................AAGGAGCTTACAATCTAGCTGTA...................................................................................................... 23 2 2 1.50 3 3 0 0 0 0 0
.....................................................................................................CAACTAGACTGTGAGCTT............................................................. 18 0 4 1.25 5 0 2 3 0 0 0
......................................................................................................AACTAGACTGTGATCTTCTAGA........................................................ 22 1 1 1.00 1 0 0 1 0 0 0
........................................................................................................CTAGACTGTGAGCTTCTAGAG....................................................... 21 0 1 1.00 1 0 1 0 0 0 0
.......................................................................................................ACTAGACCGTGAGCTTCTAG......................................................... 20 1 1 1.00 1 0 1 0 0 0 0
.......................................................AAGGAGATTACAATCTAGCTGG....................................................................................................... 22 1 2 1.00 2 2 0 0 0 0 0
.......................................................AAGGAGCTTACAATCTAGCTTG....................................................................................................... 22 1 2 1.00 2 2 0 0 0 0 0
.....................................................................................................CAACTAGACTGTGAGCTTCTGGA........................................................ 23 1 4 1.00 4 4 0 0 0 0 0
.....................................................................................................CAACTAGACTGTGAGCTTCTATA........................................................ 23 1 1 1.00 1 0 0 0 0 1 0
.........................................................................................................TAGACTGTGAGCTTCTAGAGGGT.................................................... 23 1 2 1.00 2 0 0 2 0 0 0
.......................................................AACGAGCTTACAATCTAGCTGG....................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.......................................................AAGGAGCTCACAATCTAGCTGG....................................................................................................... 22 1 5 1.00 5 5 0 0 0 0 0
........................................................AGGGGCTTACAATCTAGCTGGG...................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.......................................................ACGGAGCTTACAATCTAGCTGGT...................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
.......................................................AAGGCGCTTACAATCTAGCTGGT...................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
......................................................................................................AACTAGACTGTGAGCTTCTAGAG....................................................... 23 0 1 1.00 1 0 1 0 0 0 0
.......................................................AAGGTGCTTACAATCTAGCTGGGTT.................................................................................................... 25 3 1 1.00 1 0 1 0 0 0 0
.......................................................AAGGAGCTTAAAATCTAGCTGG....................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.....................................................................................................CAACTGGACTGTGAGCTTCTAG......................................................... 22 1 2 1.00 2 2 0 0 0 0 0
.....................................................................................................CAGCTAGACTGTGAGCTTCTA.......................................................... 21 1 2 1.00 2 2 0 0 0 0 0
.......................................................AAGGAGCTTACAATTTAGCTGG....................................................................................................... 22 1 5 1.00 5 5 0 0 0 0 0
............................................................................GGGGTAAATGACTTGCACTTGAACACA............................................................................. 27 3 1 1.00 1 0 1 0 0 0 0
......................................................CAAGGAGCTTACAATCTAGCTGGGT..................................................................................................... 25 1 1 1.00 1 0 0 1 0 0 0
.......................................................AATGAGCTTACAATCTAGCTGGGT..................................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
...........................................................AGCTTACAATCTAGCTGGG...................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0
........................................................AGGAGCTTACAATCTAGCTGGGAG.................................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0
.......................................................................................CTTGCACATGAACGCAACTAGACTGTGAGCTTCTAGA........................................................ 37 0 1 1.00 1 0 0 0 0 0 1
.....................................................................................................CAACTAGACTGTGAGCTTCTAGTT....................................................... 24 2 1 1.00 1 0 0 1 0 0 0
.......................................................AATGAGCTTACAATCTAGCTGGA...................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
.......................................................AAGGAGCTTACAAACTAGCTGG....................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.......................................................AAGGAGCTTACACTCTAGCTGGGT..................................................................................................... 24 2 2 1.00 2 1 0 0 1 0 0
.......................................................AAGGGGCTTACAATCTAGCTGGGT..................................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
......................................................CAAGGAGCTTACAATCTAGCTGT....................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
.......................................................AAGGAGCATACAATCTAGCTGGG...................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
.......................................................AAGGAGCTTACAATCTAGCGGGG...................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
.......................................................AAGGAGCTTACAATCTAGCTGGGTC.................................................................................................... 25 2 1 1.00 1 0 1 0 0 0 0
....................................................................................................CCAACTAGACTGTGAGCTTCTAG......................................................... 23 1 2 1.00 2 0 1 1 0 0 0
.......................................................AAGGAGCTTACAATCTATCTGGT...................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
.......................................................AAGGAGCTTACAACCTAGCTGGA...................................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0
.......................................................AAGGAGCCTACAATCTAGCTGGA...................................................................................................... 23 2 1 1.00 1 0 0 1 0 0 0
.......................................................AAGGAGCTTACAATCTAGCTGGGAG.................................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0
.......................................................AAGGAGCTTACGATCTAGCTGGA...................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
...................................................................................................CGCAACTAGACTGTGAGCTTCT........................................................... 22 0 1 1.00 1 0 1 0 0 0 0
.......................................................AAGGAGCTTACAATCTAACTGGG...................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
.......................................................AAGGAGCTTAGAATCTAGCTGGGT..................................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
.......................................................AAGGAGCTTACAATCTTGCTGGG...................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
.......................................................AAGGAGCTTACAACCTAGCTGGG...................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
.....................................................................................................CAACTAGATTGTGAGCTTCTAG......................................................... 22 1 1 1.00 1 0 1 0 0 0 0
......................................................CAGGGAGCTTACAATCTAGCTGGG...................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
..............................................................................GGTGAATGACTTGCACATGAA................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................................CAACTAGACTGTGAGCTTCTAGC........................................................ 23 1 1 1.00 1 0 1 0 0 0 0
........................................................AGGAGCTTACAATCTAGCTGGGC..................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
.......................................................AAGAAGCTTACAATCTAGCTGG....................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.....................................................................................................CACCTAGACTGTGAGCTTCTAGA........................................................ 23 1 1 1.00 1 1 0 0 0 0 0
.....................................................................................................CAACTACACTGTGAGCTTCTAGA........................................................ 23 1 1 1.00 1 0 1 0 0 0 0
..................................................................................AATGACTTGCACATGAACGCAACTAGACTGTGAGCTTCTAGA........................................................ 42 0 1 1.00 1 0 0 0 0 1 0
........................................................AGGAGCTTACGATCTAGCTGG....................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
..............................................................................GGTGAATGGCTTGCACATGAACG............................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
.......................................................AAGGAGCTTACGATCTAGCTG........................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
....................................................CCAAAGGAGCTTACAATCTAGCTGGGT..................................................................................................... 27 3 1 1.00 1 0 1 0 0 0 0
.....................................................................................................CAACTAGACTGTTAGCTTCTAG......................................................... 22 1 1 1.00 1 1 0 0 0 0 0
........................................................AGGAGCTTACAATCTAGCTGGGTT.................................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
.....................................................................................................CAACTAGACTGTGAGCTTCTAGTA....................................................... 24 2 1 1.00 1 0 1 0 0 0 0
........................................................AAGAGCTTACAATCTAGCTGG....................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
.....................................................................................................CAGCTGGACTGTGAGCTTCTAGA........................................................ 23 2 4 1.00 4 3 1 0 0 0 0
.......................................................AAGGAGCTTACAATCTAGCTGGGTATT.................................................................................................. 27 3 1 1.00 1 1 0 0 0 0 0
.....................................................................................................CAACTCGACTGTGAGCTTCTAGA........................................................ 23 1 1 1.00 1 1 0 0 0 0 0
.....................................................................................................CACCTAGACTGTGAGCTTCTAG......................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.......................................................AAGGAGCGTACAATCTAGCTGGA...................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
.......................................................AAGGACCTTACAATCTAGCTGG....................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.......................................................AAGGAGCTAACAATCTAGCTGGG...................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
.........................................................................................................TAGACTGTGAGCTTCTAGA........................................................ 19 0 2 1.00 2 0 1 1 0 0 0
.......................................................AAGGAGCTTACAATATAGCTGGG...................................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0
.....................................................................................................CAACTGGACTGTGAGCTTCTAGA........................................................ 23 1 2 1.00 2 1 1 0 0 0 0
.......................................................AAGGAGCATACAATCTAGCTGGT...................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
......................................................................................................AACTAGACTGTGAGCTTTTAGA........................................................ 22 1 1 1.00 1 1 0 0 0 0 0
.....................................................................................................CAACTAGACTGTGAACTTCTAGA........................................................ 23 1 1 1.00 1 0 1 0 0 0 0
...............................GTGTTTGAAGTGGTGACTGCCCTC............................................................................................................................. 24 3 1 1.00 1 0 1 0 0 0 0
................................................................................................GAACACAACTAGACTGTGAGCT.............................................................. 22 1 1 1.00 1 0 0 1 0 0 0
.......................................................AAGGAGCTTACAAGCTAGCTGG....................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.....................................................................................................CGACTAGACTGTGAGCTTCTAG......................................................... 22 1 1 1.00 1 0 1 0 0 0 0
.......................................................AAGCAGCTTACAATCTACCTGGG...................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
.....................................................................................................CAACTAGACCGTGAGCTTCTAG......................................................... 22 1 1 1.00 1 0 1 0 0 0 0
.....................................................................................................CAACTAGACTGTGAGCTTGTAG......................................................... 22 1 1 1.00 1 0 0 1 0 0 0
.......................................................AAGGCGCTTACAATCTAGCTG........................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
......................................................................................................AACTAGACTGTGAGATTCTAGA........................................................ 22 1 1 1.00 1 0 1 0 0 0 0
.......................................................AATGAGCTTACAATCTAGCTGGG...................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
.........................................................................................................TAGACTGTGAGCTTCTAGAGGT..................................................... 22 1 1 1.00 1 0 1 0 0 0 0
.......................................................AAGGAGCTTACAATCTAGCGGGT...................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
.........................................................................................................TAGACTGTGAGCTTCTAGAGGG..................................................... 22 0 1 1.00 1 0 1 0 0 0 0
.....................................................................................................CAACTCGACTGTGAGCTTCTAGT........................................................ 23 2 1 1.00 1 0 1 0 0 0 0
........................................................AGGAGCTTACAATCTAGCTGGT...................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.......................................................TAGGAGCGTACAATCTAGCTGGG...................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
.......................................................AAGGAGCTTACAATCTCGCT......................................................................................................... 20 1 1 1.00 1 0 0 1 0 0 0
.....................................................................................................CAACTAGACTGTGATCTTCTAG......................................................... 22 1 1 1.00 1 0 1 0 0 0 0
.......................................................AAGAAGCTTACAATCTAGCTGGG...................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
.......................................................AAGGAGCTTACAATCTAGCTGGGCT.................................................................................................... 25 2 1 1.00 1 0 0 1 0 0 0
.......................................................AAGGAGCTTACAATCTAGCTTGGT..................................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
.......................................................AAGGAGCTTCCAATCTCGCTGGG...................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
.......................................................AAGGAGCTTACCATCTAGCTG........................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
........................................................ATGAGCTTACAATCTAGCTGGG...................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
......................................................CAAGGAGCTTACAATCTAGCT......................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0
.....................................................................................................CAACTAGACTGCGAGCTTCTAG......................................................... 22 1 1 1.00 1 0 1 0 0 0 0
.......................................................AAGCAGCTTACAATCTAGCTG........................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
.......................................................AAGGAGCTTACAATCTAGCTGCG...................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
.............................................................CTTACAATCTAGCTGGG...................................................................................................... 17 0 1 1.00 1 0 1 0 0 0 0
.......................................................AAGGAGCTTACAATGTAGCTGGG...................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
.......................................................AAGGCGCTTACAACCTAGCTGG....................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
.......................................................AAGGAGCTTACAATCTCGCTGGGT..................................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
......................................................................................................AACTAGACTGTGAGCTTCTAGC........................................................ 22 1 1 1.00 1 0 1 0 0 0 0
.....................................................................................................CAACCAGACTGTGAGCTTCTAG......................................................... 22 1 1 1.00 1 0 1 0 0 0 0
.......................................................AAGGAGCTTACAATCTAGCTGGGTATA.................................................................................................. 27 3 2 1.00 2 1 0 1 0 0 0
.......................................................AAAGAGCTTACAATCTAGCTGGT...................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
.....................................................................................................CAACTAGACTGTAAGCTTCTAGA........................................................ 23 1 1 1.00 1 1 0 0 0 0 0
.......................................................AAGGAGCTTACAATCTAGCTGGGTAA................................................................................................... 26 3 6 0.67 4 3 0 1 0 0 0
.......................................................AAGGAGCTTACAATCTAGCAGGG...................................................................................................... 23 1 3 0.67 2 1 0 0 1 0 0
.......................................................AAGGAGCTTACAATCTAGCTAA....................................................................................................... 22 2 6 0.67 4 3 0 0 1 0 0
.....................................................................................................CAACTAGACTGTGAGCTTC............................................................ 19 0 3 0.67 2 0 2 0 0 0 0
.......................................................AGGGAGCTTACAATCTAGCTGGGT..................................................................................................... 24 2 3 0.67 2 1 0 1 0 0 0
..................................................................................................ACACAACTAGACTGTGAGCTTC............................................................ 22 1 3 0.67 2 0 2 0 0 0 0
.......................................................GAGGAGCTTACAATCTAGCTGGGA..................................................................................................... 24 2 3 0.67 2 1 0 1 0 0 0
.......................................................AAGGAGCTTACCATCTAGCTGGA...................................................................................................... 23 2 5 0.60 3 3 0 0 0 0 0
.......................................................AAGGAGCTTACAATCTA............................................................................................................ 17 0 14 0.57 8 8 0 0 0 0 0
.......................................................AAGGAGCTTACAATCTAGCTGGTA..................................................................................................... 24 2 2 0.50 1 1 0 0 0 0 0
......................................................................................................AACCAGACTGTGAGCTTCTA.......................................................... 20 1 2 0.50 1 0 1 0 0 0 0
.......................................................AAGGAGCTTACAATCTAGATGG....................................................................................................... 22 1 2 0.50 1 1 0 0 0 0 0
......................................................................................................AACTAGACTGTGAGCTTCTATT........................................................ 22 2 2 0.50 1 0 0 1 0 0 0
.......................................................AAGGAGCTTACAATCAAGCTGGG...................................................................................................... 23 1 2 0.50 1 0 0 1 0 0 0
.......................................................TAGGAGCTTACAATCTAGCTTGG...................................................................................................... 23 2 2 0.50 1 1 0 0 0 0 0
....................................................ATTAAGGAGCTTACAATCTAGCTGG....................................................................................................... 25 2 2 0.50 1 0 1 0 0 0 0
.......................................................AAGGAGCTTACCATCTCGCTGGG...................................................................................................... 23 2 2 0.50 1 1 0 0 0 0 0
.......................................................AAGGAGCTTACAATCTAGCTGGAC..................................................................................................... 24 2 2 0.50 1 0 0 1 0 0 0
.......................................................AAGGAGCTTACAATCTCGCTGT....................................................................................................... 22 2 2 0.50 1 1 0 0 0 0 0
.......................................................AAGGAGCCTACAATCTAGCTGGGA..................................................................................................... 24 2 2 0.50 1 1 0 0 0 0 0
.....................................................................................................CAGCTCGACTGTGAGCTTCTAGA........................................................ 23 2 2 0.50 1 1 0 0 0 0 0
.......................................................AAGCAGCTTACAATCTAGCCGGG...................................................................................................... 23 2 2 0.50 1 1 0 0 0 0 0
.......................................................AAGGAGCTTACAATCTATCTTGG...................................................................................................... 23 2 2 0.50 1 1 0 0 0 0 0
.....................................................................................................CAACTAGACTGTGAGCTTCTGG......................................................... 22 1 4 0.50 2 1 0 0 0 1 0

Anti-sense strand reads

tgggttgggggtACCAACCgCtCCCtgCCgACACACACtACACCAttgACgggAgttCCtCgAAtgttAgAtCgACCCCCACttACtgAACgtgtACttgCGTtgAtCtgACACtCgAAgAtCtCCCgtCCCtggAAtgggAttCAgtAgAgAgAAgAgtgggACgtgtgggAgggACtC

******************************************....................................((.(((((...............))))).))...............................**************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR066809

ovary		 SRR1274763

ovary
.......................................................................................................TGATCTGACACTCGAAGAGCT........................................................ 21 1 14 0.07 1 1 0
.......................................................................................................TGATCTGACACTCGAAGAGC......................................................... 20 1 17 0.06 1 1 0
.......................................................................................................TGATCTGACACTCGA.............................................................. 15 0 20 0.05 1 0 1

Generated: 09/01/2015 at 11:41 AM